RNA–Protein interactions for RNA: YAL018C

LDS1, Transcript of Protein Involved in spore wall assembly, yeast

Gene LDS1, Length 978 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LDS1	YAL018C	CDC43	P18898	376 aa		4.23	□□□□□ -1.73
LDS1	YAL018C	VTC1	P40046	129 aa	RIP-Chip data	4.23	□□□□□ -1.73	not detected
LDS1	YAL018C	RRT15	Q3E811	62 aa		4.23	□□□□□ -1.73
LDS1	YAL018C	MBF1	O14467	151 aa	Known RBP	4.22	□□□□□ -1.73
LDS1	YAL018C	YAL064W	P39711	94 aa		4.22	□□□□□ -1.73
LDS1	YAL018C	CWP2	P43497	92 aa		4.22	□□□□□ -1.73
LDS1	YAL018C	MRPS12	P53732	153 aa		4.22	□□□□□ -1.73
LDS1	YAL018C	YNR077C	P53758	84 aa		4.22	□□□□□ -1.73
LDS1	YAL018C	ELC1	Q03071	99 aa		4.22	□□□□□ -1.73
LDS1	YAL018C	RPL28	P02406	149 aa	Known RBP	4.21	□□□□□ -1.74
LDS1	YAL018C	ANB1	P19211	157 aa		4.21	□□□□□ -1.74
LDS1	YAL018C	UGX2	P32772	223 aa		4.21	□□□□□ -1.74
LDS1	YAL018C	OXA1	P39952	402 aa		4.21	□□□□□ -1.74
LDS1	YAL018C	YEL067C	P39978	195 aa		4.21	□□□□□ -1.74
LDS1	YAL018C	ABF2	Q02486	183 aa		4.21	□□□□□ -1.74
LDS1	YAL018C	YPL229W	Q99395	206 aa		4.21	□□□□□ -1.74
LDS1	YAL018C	AQY2	P0CD90	149 aa		4.2	□□□□□ -1.74
LDS1	YAL018C	YBL081W	P38180	368 aa	Known RBP	4.2	□□□□□ -1.74
LDS1	YAL018C	YPR195C	Q06594	109 aa		4.2	□□□□□ -1.74
LDS1	YAL018C	YBR182C-A	Q8TGU6	64 aa		4.2	□□□□□ -1.74
LDS1	YAL018C	SNA2	P56508	79 aa		4.19	□□□□□ -1.74
LDS1	YAL018C	SMD1	Q02260	146 aa	Predicted RBP	4.19	□□□□□ -1.74
LDS1	YAL018C	YDR029W	Q12111	104 aa		4.19	□□□□□ -1.74
LDS1	YAL018C	YGL041C-B	Q3E750	60 aa		4.19	□□□□□ -1.74
LDS1	YAL018C	YER181C	P40097	107 aa		4.18	□□□□□ -1.74
LDS1	YAL018C	YFR057W	P43625	151 aa		4.18	□□□□□ -1.74
LDS1	YAL018C	UBC11	P52492	156 aa		4.18	□□□□□ -1.74
LDS1	YAL018C	YKL023C-A	Q2V2P3	75 aa		4.18	□□□□□ -1.74
LDS1	YAL018C	YOR020W-A	Q3E824	90 aa		4.18	□□□□□ -1.74
LDS1	YAL018C	YDR034C-A	P0C289	58 aa		4.17	□□□□□ -1.74
LDS1	YAL018C	MVB12	P42939	101 aa		4.17	□□□□□ -1.74
LDS1	YAL018C	PAI3	P01094	68 aa		4.16	□□□□□ -1.74
LDS1	YAL018C	STF1	P01098	86 aa		4.16	□□□□□ -1.74
LDS1	YAL018C	RPL29	P05747	59 aa	Predicted RBP	4.16	□□□□□ -1.74
LDS1	YAL018C	YBL039W-B	P0C268	59 aa		4.16	□□□□□ -1.74
LDS1	YAL018C	POP7	P38291	140 aa		4.16	□□□□□ -1.74
LDS1	YAL018C	YIA6	P40556	373 aa		4.16	□□□□□ -1.74
LDS1	YAL018C	YFL019C	P43576	117 aa		4.16	□□□□□ -1.74
LDS1	YAL018C	YNL190W	P53872	204 aa		4.16	□□□□□ -1.74
LDS1	YAL018C	YLR296W	Q05898	108 aa		4.16	□□□□□ -1.74
LDS1	YAL018C	YLL006W-A	Q3E814	58 aa		4.16	□□□□□ -1.74
LDS1	YAL018C	YHR130C	P38834	111 aa		4.15	□□□□□ -1.75
LDS1	YAL018C	RGM1	Q00453	211 aa		4.15	□□□□□ -1.75
LDS1	YAL018C	HPA2	Q06592	156 aa		4.15	□□□□□ -1.75
LDS1	YAL018C	COX10	P21592	462 aa		4.14	□□□□□ -1.75
LDS1	YAL018C	NHP2	P32495	156 aa	Predicted RBP	4.14	□□□□□ -1.75
LDS1	YAL018C	GAT4	P40569	121 aa		4.14	□□□□□ -1.75
LDS1	YAL018C	ECM12	O13529	151 aa		4.13	□□□□□ -1.75
LDS1	YAL018C	Q0032	Q9ZZX7	96 aa		4.13	□□□□□ -1.75
LDS1	YAL018C	MID2	P36027	376 aa		4.12	□□□□□ -1.75
LDS1	YAL018C	UIP3	P39547	235 aa		4.12	□□□□□ -1.75
LDS1	YAL018C	AIM19	P40502	157 aa		4.12	□□□□□ -1.75
LDS1	YAL018C	LSM6	Q06406	86 aa	Known RBP	4.12	□□□□□ -1.75
LDS1	YAL018C	YIL102C-A	Q2V2P5	75 aa		4.12	□□□□□ -1.75
LDS1	YAL018C	YNL162W-A	Q3E7A8	72 aa		4.12	□□□□□ -1.75
LDS1	YAL018C	RPL26A	P05743	127 aa	Known RBP	4.11	□□□□□ -1.75
LDS1	YAL018C	UBC4	P15731	148 aa		4.11	□□□□□ -1.75
LDS1	YAL018C	KNH1	P50112	268 aa		4.11	□□□□□ -1.75
LDS1	YAL018C	RPL26B	P53221	127 aa	Known RBP	4.11	□□□□□ -1.75
LDS1	YAL018C	EOS1	P53938	366 aa		4.11	□□□□□ -1.75
LDS1	YAL018C	YPR170W-B	P0C5R9	85 aa		4.1	□□□□□ -1.75
LDS1	YAL018C	PEX22	P39718	180 aa		4.1	□□□□□ -1.75
LDS1	YAL018C	LCL2	Q08045	131 aa		4.1	□□□□□ -1.75
LDS1	YAL018C	MDN1	Q12019	4910 aa	Known RBP	4.1	□□□□□ -1.75
LDS1	YAL018C	SMP1	P38128	452 aa		4.09	□□□□□ -1.75
LDS1	YAL018C	ICY1	Q04329	127 aa		4.09	□□□□□ -1.75
LDS1	YAL018C	IRC21	Q04772	201 aa		4.09	□□□□□ -1.75
LDS1	YAL018C	MHR1	Q06630	226 aa		4.09	□□□□□ -1.75
LDS1	YAL018C	ARO2	P28777	376 aa	Known RBP	4.08	□□□□□ -1.76
LDS1	YAL018C	MRPL24	P36525	258 aa	Predicted RBP	4.08	□□□□□ -1.76
LDS1	YAL018C	LCL1	Q02786	101 aa		4.08	□□□□□ -1.76
LDS1	YAL018C	CPR1	P14832	162 aa	Known RBP	4.07	□□□□□ -1.76
LDS1	YAL018C	IGD1	P43598	195 aa		4.07	□□□□□ -1.76
LDS1	YAL018C	YER039C-A	P0CD97	72 aa		4.06	□□□□□ -1.76
LDS1	YAL018C	HYP2	P23301	157 aa	Known RBP	4.06	□□□□□ -1.76
LDS1	YAL018C	HUR1	P45820	110 aa		4.06	□□□□□ -1.76
LDS1	YAL018C	YGL193C	P53097	103 aa		4.05	□□□□□ -1.76
LDS1	YAL018C	YLR236C	A0A023PZG4	107 aa		4.04	□□□□□ -1.76
LDS1	YAL018C	YNL198C	P40166	100 aa		4.04	□□□□□ -1.76
LDS1	YAL018C	GIS2	P53849	153 aa	Known RBP RIP-Chip data	4.04	□□□□□ -1.76	not detected
LDS1	YAL018C	YNL042W-B	Q3E7Z2	85 aa		4.04	□□□□□ -1.76
LDS1	YAL018C	YLR307C-A	Q3E825	87 aa		4.04	□□□□□ -1.76
LDS1	YAL018C	YJL127C-B	Q3E828	52 aa		4.03	□□□□□ -1.76
LDS1	YAL018C	FYV5	P25585	152 aa		4.02	□□□□□ -1.77
LDS1	YAL018C	SFT1	P43682	97 aa		4.02	□□□□□ -1.77
LDS1	YAL018C	YPL257W	Q08974	193 aa		4.02	□□□□□ -1.77
LDS1	YAL018C	SPT4	P32914	102 aa	Predicted RBP	4.01	□□□□□ -1.77
LDS1	YAL018C	MSA2	P36157	363 aa		4.01	□□□□□ -1.77
LDS1	YAL018C	YBR230W-A	Q3E762	66 aa		4.01	□□□□□ -1.77
LDS1	YAL018C	YOR034C-A	Q3E735	80 aa		4	□□□□□ -1.77
LDS1	YAL018C	MMS2	P53152	137 aa		3.99	□□□□□ -1.77
LDS1	YAL018C	DDR2	P89113	61 aa		3.99	□□□□□ -1.77
LDS1	YAL018C	YBL112C	Q3E7Y4	105 aa		3.99	□□□□□ -1.77
LDS1	YAL018C	TMA7	Q3E764	64 aa	Known RBP	3.97	□□□□□ -1.77
LDS1	YAL018C	YGR121W-A	Q3E816	71 aa		3.97	□□□□□ -1.77
LDS1	YAL018C	BET1	P22804	142 aa		3.96	□□□□□ -1.78
LDS1	YAL018C	OST2	P46964	130 aa		3.96	□□□□□ -1.78
LDS1	YAL018C	MPC3	P53311	146 aa		3.96	□□□□□ -1.78
LDS1	YAL018C	TSC3	Q3E790	80 aa		3.96	□□□□□ -1.78
LDS1	YAL018C	YJR107C-A	P0CT86	78 aa		3.95	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 32.3 ms