RNA–Protein interactions for RNA: RDN18-1

RDN18-1, Transcript of 18S ribosomal RNA (18S rRNA), yeastyeast

Gene RDN18-1, Length 1,800 nt, Biotype rRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RDN18-1RDN18-1 VTS1Q08831 523 aaKnown RBP RIP-Chip data7.36□□□□□ -1.23not detected
RDN18-1RDN18-1 OST2P46964 130 aa7.36□□□□□ -1.23
RDN18-1RDN18-1 ERI1P62651 68 aaKnown RBP7.36□□□□□ -1.23
RDN18-1RDN18-1 RDS3Q06835 107 aaPredicted RBP7.36□□□□□ -1.23
RDN18-1RDN18-1 PPT2Q12036 173 aa7.36□□□□□ -1.23
RDN18-1RDN18-1 DUT1P33317 147 aa7.35□□□□□ -1.23
RDN18-1RDN18-1 YHR130CP38834 111 aa7.35□□□□□ -1.23
RDN18-1RDN18-1 EOS1P53938 366 aa7.35□□□□□ -1.23
RDN18-1RDN18-1 HAL1Q01766 294 aa7.35□□□□□ -1.23
RDN18-1RDN18-1 RPR2P40571 144 aa7.34□□□□□ -1.23
RDN18-1RDN18-1 RGM1Q00453 211 aa7.34□□□□□ -1.23
RDN18-1RDN18-1 SGF11Q03067 99 aa7.34□□□□□ -1.23
RDN18-1RDN18-1 DSE2P38844 325 aa7.34□□□□□ -1.24
RDN18-1RDN18-1 UBC11P52492 156 aa7.34□□□□□ -1.24
RDN18-1RDN18-1 YLR281CQ05863 155 aa7.34□□□□□ -1.24
RDN18-1RDN18-1 YAL065CO13511 128 aa7.33□□□□□ -1.24
RDN18-1RDN18-1 ENV10Q99382 181 aa7.33□□□□□ -1.24
RDN18-1RDN18-1 RPA12P32529 125 aaKnown RBP7.32□□□□□ -1.24
RDN18-1RDN18-1 YLL006W-AQ3E814 58 aa7.32□□□□□ -1.24
RDN18-1RDN18-1 COX10P21592 462 aa7.31□□□□□ -1.24
RDN18-1RDN18-1 ATX1P38636 73 aa7.31□□□□□ -1.24
RDN18-1RDN18-1 YOR034C-AQ3E735 80 aa7.31□□□□□ -1.24
RDN18-1RDN18-1 ERG28P40030 148 aa7.29□□□□□ -1.24
RDN18-1RDN18-1 YMR320WQ04897 101 aa7.29□□□□□ -1.24
RDN18-1RDN18-1 INO4P13902 151 aa7.29□□□□□ -1.24
RDN18-1RDN18-1 HUR1P45820 110 aa7.29□□□□□ -1.24
RDN18-1RDN18-1 ABF2Q02486 183 aa7.29□□□□□ -1.24
RDN18-1RDN18-1 RPL33AP05744 107 aaKnown RBP7.27□□□□□ -1.25
RDN18-1RDN18-1 YBL081WP38180 368 aaKnown RBP7.27□□□□□ -1.25
RDN18-1RDN18-1 RPL33BP41056 107 aaKnown RBP7.27□□□□□ -1.25
RDN18-1RDN18-1 YPL229WQ99395 206 aa7.27□□□□□ -1.25
RDN18-1RDN18-1 MRPL24P36525 258 aaPredicted RBP7.27□□□□□ -1.25
RDN18-1RDN18-1 YMR175W-AQ3E766 64 aa7.27□□□□□ -1.25
RDN18-1RDN18-1 DIF1O13577 133 aa7.26□□□□□ -1.25
RDN18-1RDN18-1 SVP26P38869 228 aa7.26□□□□□ -1.25
RDN18-1RDN18-1 RPC10P40422 70 aa7.25□□□□□ -1.25
RDN18-1RDN18-1 YOR020W-AQ3E824 90 aa7.25□□□□□ -1.25
RDN18-1RDN18-1 YLL066W-BQ8TGJ7 56 aa7.24□□□□□ -1.25
RDN18-1RDN18-1 YAL064WP39711 94 aa7.24□□□□□ -1.25
RDN18-1RDN18-1 AIM19P40502 157 aa7.24□□□□□ -1.25
RDN18-1RDN18-1 YDR115WQ04598 105 aa7.24□□□□□ -1.25
RDN18-1RDN18-1 AUA1P32450 94 aa7.23□□□□□ -1.25
RDN18-1RDN18-1 ISD11Q6Q560 94 aa7.23□□□□□ -1.25
RDN18-1RDN18-1 YLR122CQ12312 125 aa7.22□□□□□ -1.25
RDN18-1RDN18-1 KNH1P50112 268 aa7.21□□□□□ -1.26
RDN18-1RDN18-1 IRC21Q04772 201 aa7.21□□□□□ -1.26
RDN18-1RDN18-1 YDL241WQ07738 123 aa7.21□□□□□ -1.26
RDN18-1RDN18-1 YLR236CA0A023PZG4 107 aa7.2□□□□□ -1.26
RDN18-1RDN18-1 SPC1P46965 94 aa7.2□□□□□ -1.26
RDN18-1RDN18-1 YPR010C-AA5Z2X5 72 aa7.19□□□□□ -1.26
RDN18-1RDN18-1 MSA2P36157 363 aa7.19□□□□□ -1.26
RDN18-1RDN18-1 MVB12P42939 101 aa7.19□□□□□ -1.26
RDN18-1RDN18-1 YFL065CP43539 102 aa7.19□□□□□ -1.26
RDN18-1RDN18-1 PBA1Q05778 276 aa7.19□□□□□ -1.26
RDN18-1RDN18-1 YPR203WQ08994 102 aa7.19□□□□□ -1.26
RDN18-1RDN18-1 RRT15Q3E811 62 aa7.19□□□□□ -1.26
RDN18-1RDN18-1 SMD1Q02260 146 aaPredicted RBP7.18□□□□□ -1.26
RDN18-1RDN18-1 RPL29P05747 59 aaPredicted RBP7.16□□□□□ -1.26
RDN18-1RDN18-1 PBI2P0CT04 75 aaKnown RBP7.16□□□□□ -1.26
RDN18-1RDN18-1 YAL063C-AQ3E791 96 aa7.16□□□□□ -1.26
RDN18-1RDN18-1 YDR381C-AQ3E6R5 114 aa7.15□□□□□ -1.26
RDN18-1RDN18-1 AQY2P0CD90 149 aa7.15□□□□□ -1.27
RDN18-1RDN18-1 ICY1Q04329 127 aa7.15□□□□□ -1.27
RDN18-1RDN18-1 YCR085WP25650 117 aa7.14□□□□□ -1.27
RDN18-1RDN18-1 YRA2P36036 203 aaKnown RBP RIP-Chip data7.14□□□□□ -1.27not detected
RDN18-1RDN18-1 MPC3P53311 146 aa7.14□□□□□ -1.27
RDN18-1RDN18-1 SKI6P46948 246 aaPredicted RBP7.13□□□□□ -1.27
RDN18-1RDN18-1 RTC6O14464 93 aa7.13□□□□□ -1.27
RDN18-1RDN18-1 YKL069WP36088 180 aa7.13□□□□□ -1.27
RDN18-1RDN18-1 YNL162W-AQ3E7A8 72 aa7.12□□□□□ -1.27
RDN18-1RDN18-1 YFL019CP43576 117 aa7.11□□□□□ -1.27
RDN18-1RDN18-1 YJR107C-AP0CT86 78 aa7.11□□□□□ -1.27
RDN18-1RDN18-1 IGD1P43598 195 aa7.11□□□□□ -1.27
RDN18-1RDN18-1 YBL039W-BP0C268 59 aa7.1□□□□□ -1.27
RDN18-1RDN18-1 UBC4P15731 148 aa7.07□□□□□ -1.28
RDN18-1RDN18-1 YFL041W-AQ3E817 63 aa7.07□□□□□ -1.28
RDN18-1RDN18-1 STF1P01098 86 aa7.06□□□□□ -1.28
RDN18-1RDN18-1 KRE1P17260 313 aa7.06□□□□□ -1.28
RDN18-1RDN18-1 YAR023CD6VPM8 179 aa7.06□□□□□ -1.28
RDN18-1RDN18-1 YHR139C-AO13536 103 aa7.05□□□□□ -1.28
RDN18-1RDN18-1 SMP1P38128 452 aa7.05□□□□□ -1.28
RDN18-1RDN18-1 YNL184CP53876 108 aa7.04□□□□□ -1.28
RDN18-1RDN18-1 SNA2P56508 79 aa7.02□□□□□ -1.29
RDN18-1RDN18-1 ATP18P81450 59 aa7.01□□□□□ -1.29
RDN18-1RDN18-1 YBR230W-AQ3E762 66 aa7.01□□□□□ -1.29
RDN18-1RDN18-1 YLR307C-AQ3E825 87 aa7.01□□□□□ -1.29
RDN18-1RDN18-1 EDC1P53080 175 aaPredicted RBP7.01□□□□□ -1.29
RDN18-1RDN18-1 RAD6P06104 172 aa7□□□□□ -1.29
RDN18-1RDN18-1 GAT4P40569 121 aa7□□□□□ -1.29
RDN18-1RDN18-1 RPL26AP05743 127 aaKnown RBP6.99□□□□□ -1.29
RDN18-1RDN18-1 RPL26BP53221 127 aaKnown RBP6.99□□□□□ -1.29
RDN18-1RDN18-1 YFR009W-AP0C5M9 85 aa6.99□□□□□ -1.29
RDN18-1RDN18-1 FYV5P25585 152 aa6.99□□□□□ -1.29
RDN18-1RDN18-1 YJL127C-BQ3E828 52 aa6.99□□□□□ -1.29
RDN18-1RDN18-1 Q0032Q9ZZX7 96 aa6.98□□□□□ -1.29
RDN18-1RDN18-1 RPL11AP0C0W9 174 aaKnown RBP6.97□□□□□ -1.29
RDN18-1RDN18-1 RPL11BQ3E757 174 aaPredicted RBP6.97□□□□□ -1.29
RDN18-1RDN18-1 YPR195CQ06594 109 aa6.94□□□□□ -1.3
RDN18-1RDN18-1 EMC6Q12431 108 aa6.94□□□□□ -1.3
RDN18-1RDN18-1 YDR119W-AQ2V2P9 66 aa6.94□□□□□ -1.3
Retrieved 100 of 5,963 RNA–protein pairs in 8.3 ms