RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 NFICP08651 508 aa18.17■□□□□ 0.5
PHGDH-234ENST00000642041 FGFR1P11362 822 aa18.17■□□□□ 0.5
PHGDH-234ENST00000642041 DESP17661 470 aa18.17■□□□□ 0.5
PHGDH-234ENST00000642041 CETN2P41208 172 aa18.17■□□□□ 0.5
PHGDH-234ENST00000642041 WNT7BP56706 349 aa18.17■□□□□ 0.5
PHGDH-234ENST00000642041 FAM189BP81408 668 aa18.17■□□□□ 0.5
PHGDH-234ENST00000642041 LMNB2Q03252 620 aa18.17■□□□□ 0.5
PHGDH-234ENST00000642041 INCA1Q0VD86 236 aa18.17■□□□□ 0.5
PHGDH-234ENST00000642041 SV2CQ496J9 727 aa18.17■□□□□ 0.5
PHGDH-234ENST00000642041 CDR2LQ86X02 465 aaPredicted RBP18.17■□□□□ 0.5
PHGDH-234ENST00000642041 MCOLN2Q8IZK6 566 aa18.17■□□□□ 0.5
PHGDH-234ENST00000642041 CEP120Q8N960 986 aa18.17■□□□□ 0.5
PHGDH-234ENST00000642041 ACTRT1Q8TDG2 376 aa18.17■□□□□ 0.5
PHGDH-234ENST00000642041 MAIP1Q8WWC4 291 aa18.17■□□□□ 0.5
PHGDH-234ENST00000642041 ATRIPQ8WXE1 791 aa18.17■□□□□ 0.5
PHGDH-234ENST00000642041 ANKRD7Q92527 254 aa18.17■□□□□ 0.5
PHGDH-234ENST00000642041 ZNF653Q96CK0 615 aa18.17■□□□□ 0.5
PHGDH-234ENST00000642041 RUNDC3BQ96NL0 473 aa18.17■□□□□ 0.5
PHGDH-234ENST00000642041 TLR10Q9BXR5 811 aa18.17■□□□□ 0.5
PHGDH-234ENST00000642041 THAP2Q9H0W7 228 aa18.17■□□□□ 0.5
PHGDH-234ENST00000642041 ELAC1Q9H777 363 aaKnown RBP18.17■□□□□ 0.5
PHGDH-234ENST00000642041 PARVAQ9NVD7 372 aa18.17■□□□□ 0.5
PHGDH-234ENST00000642041 SNTG2Q9NY99 539 aa18.17■□□□□ 0.5
PHGDH-234ENST00000642041 ANK1P16157 1881 aa18.16■□□□□ 0.5
PHGDH-234ENST00000642041 MYO1FO00160 1098 aa18.16■□□□□ 0.5
PHGDH-234ENST00000642041 ENC1O14682 589 aa18.16■□□□□ 0.5
PHGDH-234ENST00000642041 DCNP07585 359 aaKnown RBP18.16■□□□□ 0.5
PHGDH-234ENST00000642041 PNMA6AP0CW24 399 aaPredicted RBP18.16■□□□□ 0.5
PHGDH-234ENST00000642041 SETSIPP0DME0 302 aa18.16■□□□□ 0.5
PHGDH-234ENST00000642041 ABCB4P21439 1286 aa18.16■□□□□ 0.5
PHGDH-234ENST00000642041 RPL9P32969 192 aaKnown RBP18.16■□□□□ 0.5
PHGDH-234ENST00000642041 ASPAP45381 313 aa18.16■□□□□ 0.5
PHGDH-234ENST00000642041 BRD3Q15059 726 aa18.16■□□□□ 0.5
PHGDH-234ENST00000642041 CNGA2Q16280 664 aa18.16■□□□□ 0.5
PHGDH-234ENST00000642041 TMC5Q6UXY8 1006 aa18.16■□□□□ 0.5
PHGDH-234ENST00000642041 MMGT1Q8N4V1 131 aa18.16■□□□□ 0.5
PHGDH-234ENST00000642041 SLC20A1Q8WUM9 679 aa18.16■□□□□ 0.5
PHGDH-234ENST00000642041 DDX27Q96GQ7 796 aaKnown RBP18.16■□□□□ 0.5
PHGDH-234ENST00000642041 TMEM176AQ96HP8 235 aa18.16■□□□□ 0.5
PHGDH-234ENST00000642041 HES6Q96HZ4 224 aa18.16■□□□□ 0.5
PHGDH-234ENST00000642041 CASD1Q96PB1 797 aa18.16■□□□□ 0.5
PHGDH-234ENST00000642041 NT5C1AQ9BXI3 368 aa18.16■□□□□ 0.5
PHGDH-234ENST00000642041 PACSIN1Q9BY11 444 aa18.16■□□□□ 0.5
PHGDH-234ENST00000642041 GDAP2Q9NXN4 497 aa18.16■□□□□ 0.5
PHGDH-234ENST00000642041 ADAM22Q9P0K1 906 aa18.16■□□□□ 0.5
PHGDH-234ENST00000642041 CNOT8Q9UFF9 292 aaKnown RBP18.16■□□□□ 0.5
PHGDH-234ENST00000642041 SIX4Q9UIU6 781 aa18.16■□□□□ 0.5
PHGDH-234ENST00000642041 SALL4Q9UJQ4 1053 aa18.16■□□□□ 0.5
PHGDH-234ENST00000642041 SIT1Q9Y3P8 196 aa18.16■□□□□ 0.5
PHGDH-234ENST00000642041 TMCO5BA8MYB1 307 aa18.15■□□□□ 0.5
PHGDH-234ENST00000642041 SPTLC1O15269 473 aa18.15■□□□□ 0.5
PHGDH-234ENST00000642041 FANCGO15287 622 aa18.15■□□□□ 0.5
PHGDH-234ENST00000642041 CILPO75339 1184 aa18.15■□□□□ 0.5
PHGDH-234ENST00000642041 CXCL14O95715 111 aa18.15■□□□□ 0.5
PHGDH-234ENST00000642041 ITGA4P13612 1032 aa18.15■□□□□ 0.5
PHGDH-234ENST00000642041 EPCAMP16422 314 aa18.15■□□□□ 0.5
PHGDH-234ENST00000642041 LRPAP1P30533 357 aa18.15■□□□□ 0.5
PHGDH-234ENST00000642041 PBX3P40426 434 aa18.15■□□□□ 0.5
PHGDH-234ENST00000642041 GSCP56915 257 aaPredicted RBP18.15■□□□□ 0.5
PHGDH-234ENST00000642041 ACAP1Q15027 740 aa18.15■□□□□ 0.5
PHGDH-234ENST00000642041 MAP9Q49MG5 647 aa18.15■□□□□ 0.5
PHGDH-234ENST00000642041 TAF3Q5VWG9 929 aa18.15■□□□□ 0.5
PHGDH-234ENST00000642041 SPOPLQ6IQ16 392 aa18.15■□□□□ 0.5
PHGDH-234ENST00000642041 MRPL10Q7Z7H8 261 aaKnown RBP18.15■□□□□ 0.5
PHGDH-234ENST00000642041 GPR149Q86SP6 731 aa18.15■□□□□ 0.5
PHGDH-234ENST00000642041 NT5DC3Q86UY8 548 aa18.15■□□□□ 0.5
PHGDH-234ENST00000642041 ZNF564Q8TBZ8 553 aaPredicted RBP18.15■□□□□ 0.5
PHGDH-234ENST00000642041 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.15■□□□□ 0.5
PHGDH-234ENST00000642041 PKNOX2Q96KN3 472 aa18.15■□□□□ 0.5
PHGDH-234ENST00000642041 PCDHB18PQ96TA0 734 aa18.15■□□□□ 0.5
PHGDH-234ENST00000642041 NXF1Q9UBU9 619 aaKnown RBP18.15■□□□□ 0.5
PHGDH-234ENST00000642041 PARP2Q9UGN5 583 aa18.15■□□□□ 0.5
PHGDH-234ENST00000642041 SMIM28A0A1B0GU29 152 aa18.14■□□□□ 0.49
PHGDH-234ENST00000642041 HOXA2O43364 376 aa18.14■□□□□ 0.49
PHGDH-234ENST00000642041 RECQL4O94761 1208 aa18.14■□□□□ 0.49
PHGDH-234ENST00000642041 MAN1A1P33908 653 aa18.14■□□□□ 0.49
PHGDH-234ENST00000642041 TAF6P49848 677 aa18.14■□□□□ 0.49
PHGDH-234ENST00000642041 NOMO3P69849 1222 aa18.14■□□□□ 0.49
PHGDH-234ENST00000642041 ZNF528Q3MIS6 628 aa18.14■□□□□ 0.49
PHGDH-234ENST00000642041 SGO2Q562F6 1265 aa18.14■□□□□ 0.49
PHGDH-234ENST00000642041 UBXN11Q5T124 520 aa18.14■□□□□ 0.49
PHGDH-234ENST00000642041 CREG2Q8IUH2 290 aa18.14■□□□□ 0.49
PHGDH-234ENST00000642041 SLC39A11Q8N1S5 342 aa18.14■□□□□ 0.49
PHGDH-234ENST00000642041 LRRC43Q8N309 656 aa18.14■□□□□ 0.49
PHGDH-234ENST00000642041 OLIG1Q8TAK6 271 aa18.14■□□□□ 0.49
PHGDH-234ENST00000642041 CXorf38Q8TB03 319 aa18.14■□□□□ 0.49
PHGDH-234ENST00000642041 SLC22A17Q8WUG5 538 aa18.14■□□□□ 0.49
PHGDH-234ENST00000642041 TNIP3Q96KP6 325 aa18.14■□□□□ 0.49
PHGDH-234ENST00000642041 UROC1Q96N76 676 aa18.14■□□□□ 0.49
PHGDH-234ENST00000642041 EIF2AQ9BY44 585 aaKnown RBP18.14■□□□□ 0.49
PHGDH-234ENST00000642041 CYLDQ9NQC7 956 aa18.14■□□□□ 0.49
PHGDH-234ENST00000642041 FAM105AQ9NUU6 356 aa18.14■□□□□ 0.49
PHGDH-234ENST00000642041 CA14Q9ULX7 337 aa18.14■□□□□ 0.49
PHGDH-234ENST00000642041 IPPQ9Y573 584 aa18.14■□□□□ 0.49
PHGDH-234ENST00000642041 GOLGA6L10A0A0M3HER8 536 aa18.13■□□□□ 0.49
PHGDH-234ENST00000642041 CCDC151A5D8V7 595 aa18.13■□□□□ 0.49
PHGDH-234ENST00000642041 PIRO00625 290 aa18.13■□□□□ 0.49
PHGDH-234ENST00000642041 MMP8P22894 467 aa18.13■□□□□ 0.49
PHGDH-234ENST00000642041 CTNNA2P26232 953 aa18.13■□□□□ 0.49
PHGDH-234ENST00000642041 CA8P35219 290 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms