RNA–Protein interactions for RNA: ENST00000639406.1

KCNMA1-259, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNMA1, Length 5,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-259ENST00000639406 KCTD4Q8WVF5 259 aa11.28□□□□□ -0.6
KCNMA1-259ENST00000639406 INO80BQ9C086 356 aaPredicted RBP11.28□□□□□ -0.6
KCNMA1-259ENST00000639406 KIAA1683Q9H0B3 1180 aa11.28□□□□□ -0.6
KCNMA1-259ENST00000639406 CHMP1AQ9HD42 196 aaPredicted RBP11.28□□□□□ -0.6
KCNMA1-259ENST00000639406 GPR108Q9NPR9 543 aa11.28□□□□□ -0.6
KCNMA1-259ENST00000639406 MAGI3Q5TCQ9 1506 aa11.28□□□□□ -0.6
KCNMA1-259ENST00000639406 PDS5AQ29RF7 1337 aaKnown RBP11.28□□□□□ -0.6
KCNMA1-259ENST00000639406 SPATA31A6Q5VVP1 1343 aa11.28□□□□□ -0.6
KCNMA1-259ENST00000639406 FGFR3P22607 806 aa11.28□□□□□ -0.6
KCNMA1-259ENST00000639406 CCT8P50990 548 aa11.28□□□□□ -0.6
KCNMA1-259ENST00000639406 PEX3P56589 373 aa11.28□□□□□ -0.6
KCNMA1-259ENST00000639406 NME5P56597 212 aa11.28□□□□□ -0.6
KCNMA1-259ENST00000639406 DGCR6Q14129 220 aa11.28□□□□□ -0.6
KCNMA1-259ENST00000639406 EXOC3L1Q86VI1 746 aa11.28□□□□□ -0.6
KCNMA1-259ENST00000639406 TPCN2Q8NHX9 752 aa11.28□□□□□ -0.6
KCNMA1-259ENST00000639406 RNF139Q8WU17 664 aa11.28□□□□□ -0.6
KCNMA1-259ENST00000639406 PROX1Q92786 737 aa11.28□□□□□ -0.6
KCNMA1-259ENST00000639406 VPS33AQ96AX1 596 aa11.28□□□□□ -0.6
KCNMA1-259ENST00000639406 CDHR1Q96JP9 859 aa11.28□□□□□ -0.6
KCNMA1-259ENST00000639406 SEPHS2Q99611 448 aa11.28□□□□□ -0.6
KCNMA1-259ENST00000639406 EPB41L1Q9H4G0 881 aa11.28□□□□□ -0.6
KCNMA1-259ENST00000639406 COPRSQ9NQ92 184 aa11.28□□□□□ -0.6
KCNMA1-259ENST00000639406 ALG6Q9Y672 507 aa11.28□□□□□ -0.6
KCNMA1-259ENST00000639406 NR5A2O00482 541 aa11.27□□□□□ -0.6
KCNMA1-259ENST00000639406 CSNK2BP67870 215 aa11.27□□□□□ -0.6
KCNMA1-259ENST00000639406 MTM1Q13496 603 aa11.27□□□□□ -0.6
KCNMA1-259ENST00000639406 PPP1R15BQ5SWA1 713 aa11.27□□□□□ -0.6
KCNMA1-259ENST00000639406 ZBTB46Q86UZ6 589 aa11.27□□□□□ -0.6
KCNMA1-259ENST00000639406 CCDC36Q8IYA8 594 aa11.27□□□□□ -0.6
KCNMA1-259ENST00000639406 COMMD8Q9NX08 183 aa11.27□□□□□ -0.6
KCNMA1-259ENST00000639406 ARMCX1Q9P291 453 aa11.27□□□□□ -0.6
KCNMA1-259ENST00000639406 DUSP12Q9UNI6 340 aa11.27□□□□□ -0.6
KCNMA1-259ENST00000639406 JCADQ9P266 1359 aa11.27□□□□□ -0.6
KCNMA1-259ENST00000639406 POLBP06746 335 aa11.27□□□□□ -0.6
KCNMA1-259ENST00000639406 SKIV2L2P42285 1042 aaKnown RBP11.27□□□□□ -0.6
KCNMA1-259ENST00000639406 EFR3AQ14156 821 aa11.27□□□□□ -0.6
KCNMA1-259ENST00000639406 OTOAQ7RTW8 1153 aa11.27□□□□□ -0.6
KCNMA1-259ENST00000639406 SAPCD2Q86UD0 394 aa11.27□□□□□ -0.6
KCNMA1-259ENST00000639406 ZBTB38Q8NAP3 1195 aaPredicted RBP11.27□□□□□ -0.6
KCNMA1-259ENST00000639406 SLC30A5Q8TAD4 765 aa11.27□□□□□ -0.6
KCNMA1-259ENST00000639406 MMTAG2Q9BU76 263 aaKnown RBP11.27□□□□□ -0.6
KCNMA1-259ENST00000639406 RPF1Q9H9Y2 349 aaKnown RBP11.27□□□□□ -0.6
KCNMA1-259ENST00000639406 TRMT13Q9NUP7 481 aaKnown RBP11.27□□□□□ -0.6
KCNMA1-259ENST00000639406 PAK5Q9P286 719 aa11.27□□□□□ -0.6
KCNMA1-259ENST00000639406 ATP8B3O60423 1300 aa11.27□□□□□ -0.6
KCNMA1-259ENST00000639406 HS6ST1O60243 411 aa11.27□□□□□ -0.61
KCNMA1-259ENST00000639406 LDLRP01130 860 aa11.27□□□□□ -0.61
KCNMA1-259ENST00000639406 ENO2P09104 434 aaPredicted RBP11.27□□□□□ -0.61
KCNMA1-259ENST00000639406 WARSP23381 471 aaKnown RBP11.27□□□□□ -0.61
KCNMA1-259ENST00000639406 POU1F1P28069 291 aa11.27□□□□□ -0.61
KCNMA1-259ENST00000639406 TSNQ15631 228 aaKnown RBP11.27□□□□□ -0.61
KCNMA1-259ENST00000639406 TXNRD1Q16881 649 aa11.27□□□□□ -0.61
KCNMA1-259ENST00000639406 FAM98BQ52LJ0 330 aaKnown RBP11.27□□□□□ -0.61
KCNMA1-259ENST00000639406 PYDC2Q56P42 97 aa11.27□□□□□ -0.61
KCNMA1-259ENST00000639406 GPATCH4Q5T3I0 446 aaKnown RBP11.27□□□□□ -0.61
KCNMA1-259ENST00000639406 ENOSF1Q7L5Y1 443 aa11.27□□□□□ -0.61
KCNMA1-259ENST00000639406 PEX5LQ8IYB4 626 aa11.27□□□□□ -0.61
KCNMA1-259ENST00000639406 BHLHE22Q8NFJ8 381 aaPredicted RBP11.27□□□□□ -0.61
KCNMA1-259ENST00000639406 ACTRT1Q8TDG2 376 aa11.27□□□□□ -0.61
KCNMA1-259ENST00000639406 PIM2Q9P1W9 311 aa11.27□□□□□ -0.61
KCNMA1-259ENST00000639406 SYNPO2Q9UMS6 1093 aa11.27□□□□□ -0.61
KCNMA1-259ENST00000639406 NAALADL1Q9UQQ1 740 aa11.27□□□□□ -0.61
KCNMA1-259ENST00000639406 RIPK2O43353 540 aa11.27□□□□□ -0.61
KCNMA1-259ENST00000639406 FAM153BP0C7A2 387 aa11.27□□□□□ -0.61
KCNMA1-259ENST00000639406 ME2P23368 584 aa11.27□□□□□ -0.61
KCNMA1-259ENST00000639406 CTSWP56202 376 aa11.27□□□□□ -0.61
KCNMA1-259ENST00000639406 SLC15A2Q16348 729 aa11.27□□□□□ -0.61
KCNMA1-259ENST00000639406 FAM153CQ494X1 144 aa11.27□□□□□ -0.61
KCNMA1-259ENST00000639406 RNF43Q68DV7 783 aa11.27□□□□□ -0.61
KCNMA1-259ENST00000639406 C8orf59Q8N0T1 100 aaPredicted RBP11.27□□□□□ -0.61
KCNMA1-259ENST00000639406 EID3Q8N140 333 aa11.27□□□□□ -0.61
KCNMA1-259ENST00000639406 DLG3Q92796 817 aa11.27□□□□□ -0.61
KCNMA1-259ENST00000639406 ZFP42Q96MM3 310 aa11.27□□□□□ -0.61
KCNMA1-259ENST00000639406 MTG1Q9BT17 334 aaPredicted RBP11.27□□□□□ -0.61
KCNMA1-259ENST00000639406 A0A0G2JPF8 293 aa11.27□□□□□ -0.61
KCNMA1-259ENST00000639406 HNRNPCL3B7ZW38 293 aa11.27□□□□□ -0.61
KCNMA1-259ENST00000639406 HNRNPCL4P0DMR1 293 aa11.27□□□□□ -0.61
KCNMA1-259ENST00000639406 RAB25P57735 213 aa11.27□□□□□ -0.61
KCNMA1-259ENST00000639406 LSM3P62310 102 aaKnown RBP11.27□□□□□ -0.61
KCNMA1-259ENST00000639406 HERVK_113P62684 666 aa11.27□□□□□ -0.61
KCNMA1-259ENST00000639406 VAC14Q08AM6 782 aa11.27□□□□□ -0.61
KCNMA1-259ENST00000639406 KRT33BQ14525 404 aa11.27□□□□□ -0.61
KCNMA1-259ENST00000639406 MTFR1Q15390 333 aa11.27□□□□□ -0.61
KCNMA1-259ENST00000639406 KCTD1Q719H9 257 aa11.27□□□□□ -0.61
KCNMA1-259ENST00000639406 EIF3MQ7L2H7 374 aaKnown RBP11.27□□□□□ -0.61
KCNMA1-259ENST00000639406 MIER2Q8N344 545 aa11.27□□□□□ -0.61
KCNMA1-259ENST00000639406 AMER2Q8N7J2 671 aa11.27□□□□□ -0.61
KCNMA1-259ENST00000639406 SHCBP1Q8NEM2 672 aa11.27□□□□□ -0.61
KCNMA1-259ENST00000639406 PAFAH2Q99487 392 aa11.27□□□□□ -0.61
KCNMA1-259ENST00000639406 TBC1D10AQ9BXI6 508 aa11.27□□□□□ -0.61
KCNMA1-259ENST00000639406 PNMA3Q9UL41 463 aa11.27□□□□□ -0.61
KCNMA1-259ENST00000639406 NPHP4O75161 1426 aaPredicted RBP11.26□□□□□ -0.61
KCNMA1-259ENST00000639406 LOC100506127A0A0U1RQW1 187 aa11.26□□□□□ -0.61
KCNMA1-259ENST00000639406 ZNF197O14709 1029 aa11.26□□□□□ -0.61
KCNMA1-259ENST00000639406 UCHL3P15374 230 aa11.26□□□□□ -0.61
KCNMA1-259ENST00000639406 MRPS22P82650 360 aaKnown RBP11.26□□□□□ -0.61
KCNMA1-259ENST00000639406 DDI2Q5TDH0 399 aa11.26□□□□□ -0.61
KCNMA1-259ENST00000639406 SLC13A5Q86YT5 568 aaPredicted RBP11.26□□□□□ -0.61
KCNMA1-259ENST00000639406 GALNT15Q8N3T1 639 aa11.26□□□□□ -0.61
KCNMA1-259ENST00000639406 OR6B3Q8NGW1 331 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms