RNA–Protein interactions for RNA: ENST00000604024.5

CEP290-208, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best)

Gene CEP290, Length 2,741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-208ENST00000604024 SNX15Q9NRS6 342 aa1.74□□□□□ -2.13
CEP290-208ENST00000604024 TMX2Q9Y320 296 aa1.74□□□□□ -2.13
CEP290-208ENST00000604024 CDKN2AP42771 156 aaKnown RBP1.73□□□□□ -2.13
CEP290-208ENST00000604024 BCAT1P54687 386 aa1.73□□□□□ -2.13
CEP290-208ENST00000604024 BOP1Q14137 746 aaKnown RBP1.73□□□□□ -2.13
CEP290-208ENST00000604024 FAM110CQ1W6H9 321 aa1.73□□□□□ -2.13
CEP290-208ENST00000604024 MGAT5BQ3V5L5 792 aa1.73□□□□□ -2.13
CEP290-208ENST00000604024 ARHGAP40Q5TG30 622 aa1.73□□□□□ -2.13
CEP290-208ENST00000604024 SYDE2Q5VT97 1194 aa1.73□□□□□ -2.13
CEP290-208ENST00000604024 PGM2L1Q6PCE3 622 aa1.73□□□□□ -2.13
CEP290-208ENST00000604024 SLC15A3Q8IY34 581 aa1.73□□□□□ -2.13
CEP290-208ENST00000604024 IZUMO1Q8IYV9 350 aa1.73□□□□□ -2.13
CEP290-208ENST00000604024 DCP1BQ8IZD4 617 aaKnown RBP1.73□□□□□ -2.13
CEP290-208ENST00000604024 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP1.73□□□□□ -2.13
CEP290-208ENST00000604024 TEKT5Q96M29 485 aa1.73□□□□□ -2.13
CEP290-208ENST00000604024 MESP1Q9BRJ9 268 aa1.73□□□□□ -2.13
CEP290-208ENST00000604024 DPCDQ9BVM2 203 aaPredicted RBP1.73□□□□□ -2.13
CEP290-208ENST00000604024 DPH1Q9BZG8 443 aa1.73□□□□□ -2.13
CEP290-208ENST00000604024 DHX36Q9H2U1 1008 aaKnown RBP1.73□□□□□ -2.13
CEP290-208ENST00000604024 SLCO5A1Q9H2Y9 848 aa1.73□□□□□ -2.13
CEP290-208ENST00000604024 FOXP1Q9H334 677 aaPredicted RBP1.73□□□□□ -2.13
CEP290-208ENST00000604024 SEMA5BQ9P283 1151 aa1.73□□□□□ -2.13
CEP290-208ENST00000604024 HEY2Q9UBP5 337 aa1.73□□□□□ -2.13
CEP290-208ENST00000604024 IGLV5-39A0A0G2JS06 123 aa1.73□□□□□ -2.13
CEP290-208ENST00000604024 C4orf47A7E2U8 309 aa1.73□□□□□ -2.13
CEP290-208ENST00000604024 H3BNX3 289 aa1.73□□□□□ -2.13
CEP290-208ENST00000604024 GABRDO14764 452 aa1.73□□□□□ -2.13
CEP290-208ENST00000604024 GCATO75600 419 aa1.73□□□□□ -2.13
CEP290-208ENST00000604024 PSG1P11464 419 aa1.73□□□□□ -2.13
CEP290-208ENST00000604024 FGF3P11487 239 aaPredicted RBP1.73□□□□□ -2.13
CEP290-208ENST00000604024 CFHR3Q02985 330 aa1.73□□□□□ -2.13
CEP290-208ENST00000604024 SLC9C1Q4G0N8 1177 aa1.73□□□□□ -2.13
CEP290-208ENST00000604024 TMTC4Q5T4D3 741 aa1.73□□□□□ -2.13
CEP290-208ENST00000604024 BCDIN3DQ7Z5W3 292 aaKnown RBP1.73□□□□□ -2.13
CEP290-208ENST00000604024 ANKRD13BQ86YJ7 626 aa1.73□□□□□ -2.13
CEP290-208ENST00000604024 IQCF1Q8N6M8 205 aa1.73□□□□□ -2.13
CEP290-208ENST00000604024 XPNPEP3Q9NQH7 507 aa1.73□□□□□ -2.13
CEP290-208ENST00000604024 LMBRD1Q9NUN5 540 aa1.73□□□□□ -2.13
CEP290-208ENST00000604024 ZSCAN32Q9NX65 697 aa1.73□□□□□ -2.13
CEP290-208ENST00000604024 XPR1Q9UBH6 696 aa1.73□□□□□ -2.13
CEP290-208ENST00000604024 MED16Q9Y2X0 877 aa1.73□□□□□ -2.13
CEP290-208ENST00000604024 SQORQ9Y6N5 450 aa1.73□□□□□ -2.13
CEP290-208ENST00000604024 M0QYG6 137 aa1.72□□□□□ -2.13
CEP290-208ENST00000604024 PRPF4O43172 522 aaKnown RBP eCLIP1.72□□□□□ -2.13
CEP290-208ENST00000604024 TLX3O43711 291 aaPredicted RBP1.72□□□□□ -2.13
CEP290-208ENST00000604024 PCDHGA12O60330 932 aa1.72□□□□□ -2.13
CEP290-208ENST00000604024 PMPCBO75439 489 aa1.72□□□□□ -2.13
CEP290-208ENST00000604024 CD19P15391 556 aa1.72□□□□□ -2.13
CEP290-208ENST00000604024 EPHA3P29320 983 aa1.72□□□□□ -2.13
CEP290-208ENST00000604024 IL6STP40189 918 aaPredicted RBP1.72□□□□□ -2.13
CEP290-208ENST00000604024 PXNP49023 591 aaPredicted RBP1.72□□□□□ -2.13
CEP290-208ENST00000604024 ALDH7A1P49419 539 aaKnown RBP1.72□□□□□ -2.13
CEP290-208ENST00000604024 HTR6P50406 440 aa1.72□□□□□ -2.13
CEP290-208ENST00000604024 TIRAPP58753 221 aa1.72□□□□□ -2.13
CEP290-208ENST00000604024 ACAP2Q15057 778 aa1.72□□□□□ -2.13
CEP290-208ENST00000604024 ASIC2Q16515 512 aa1.72□□□□□ -2.13
CEP290-208ENST00000604024 B4GALNT2Q8NHY0 566 aa1.72□□□□□ -2.13
CEP290-208ENST00000604024 R3HDM4Q96D70 268 aa1.72□□□□□ -2.13
CEP290-208ENST00000604024 ZNF668Q96K58 619 aaPredicted RBP1.72□□□□□ -2.13
CEP290-208ENST00000604024 SARS2Q9NP81 518 aaKnown RBP1.72□□□□□ -2.13
CEP290-208ENST00000604024 CNNM1Q9NRU3 951 aa1.72□□□□□ -2.13
CEP290-208ENST00000604024 KLHL13Q9P2N7 655 aa1.72□□□□□ -2.13
CEP290-208ENST00000604024 PCDHGA9Q9Y5G4 932 aaKnown RBP1.72□□□□□ -2.13
CEP290-208ENST00000604024 PCDHGA8Q9Y5G5 932 aa1.72□□□□□ -2.13
CEP290-208ENST00000604024 PCDHGA7Q9Y5G6 932 aa1.72□□□□□ -2.13
CEP290-208ENST00000604024 PCDHGA6Q9Y5G7 932 aa1.72□□□□□ -2.13
CEP290-208ENST00000604024 PCDHGA3Q9Y5H0 932 aa1.72□□□□□ -2.13
CEP290-208ENST00000604024 LACTBL1A8MY62 500 aa1.72□□□□□ -2.13
CEP290-208ENST00000604024 GRPP07492 148 aa1.72□□□□□ -2.13
CEP290-208ENST00000604024 HOXD9P28356 352 aaPredicted RBP1.72□□□□□ -2.13
CEP290-208ENST00000604024 MLH1P40692 756 aa1.72□□□□□ -2.13
CEP290-208ENST00000604024 EGR4Q05215 589 aa1.72□□□□□ -2.13
CEP290-208ENST00000604024 MTX1Q13505 466 aa1.72□□□□□ -2.13
CEP290-208ENST00000604024 CLCA4Q14CN2 919 aa1.72□□□□□ -2.13
CEP290-208ENST00000604024 ZNF750Q32MQ0 723 aa1.72□□□□□ -2.13
CEP290-208ENST00000604024 RNASE12Q5GAN4 147 aaKnown RBP1.72□□□□□ -2.13
CEP290-208ENST00000604024 RGS7BPQ6MZT1 257 aaPredicted RBP1.72□□□□□ -2.13
CEP290-208ENST00000604024 CNTD1Q8N815 330 aa1.72□□□□□ -2.13
CEP290-208ENST00000604024 VRK1Q99986 396 aaPredicted RBP1.72□□□□□ -2.13
CEP290-208ENST00000604024 C1orf43Q9BWL3 253 aa1.72□□□□□ -2.13
CEP290-208ENST00000604024 RXFP3Q9NSD7 469 aa1.72□□□□□ -2.13
CEP290-208ENST00000604024 GJB4Q9NTQ9 266 aa1.72□□□□□ -2.13
CEP290-208ENST00000604024 DECR2Q9NUI1 292 aa1.72□□□□□ -2.13
CEP290-208ENST00000604024 PCDHA7Q9UN72 937 aa1.72□□□□□ -2.13
CEP290-208ENST00000604024 TMA7Q9Y2S6 64 aaKnown RBP1.72□□□□□ -2.13
CEP290-208ENST00000604024 ARHGEF17Q96PE2 2063 aaPredicted RBP1.72□□□□□ -2.13
CEP290-208ENST00000604024 AHNAK2Q8IVF2 5795 aa1.71□□□□□ -2.14
CEP290-208ENST00000604024 A8MVJ9 347 aa1.71□□□□□ -2.14
CEP290-208ENST00000604024 ALG1L2C9J202 215 aa1.71□□□□□ -2.14
CEP290-208ENST00000604024 CCP110O43303 1012 aa1.71□□□□□ -2.14
CEP290-208ENST00000604024 TMPRSS11DO60235 418 aa1.71□□□□□ -2.14
CEP290-208ENST00000604024 APEHP13798 732 aaKnown RBP1.71□□□□□ -2.14
CEP290-208ENST00000604024 CDC25AP30304 524 aa1.71□□□□□ -2.14
CEP290-208ENST00000604024 CLCN2P51788 898 aa1.71□□□□□ -2.14
CEP290-208ENST00000604024 KRTAP10-5P60370 271 aa1.71□□□□□ -2.14
CEP290-208ENST00000604024 MYO1EQ12965 1108 aa1.71□□□□□ -2.14
CEP290-208ENST00000604024 CAPRIN2Q6IMN6 1127 aaKnown RBP1.71□□□□□ -2.14
CEP290-208ENST00000604024 SDE2Q6IQ49 451 aa1.71□□□□□ -2.14
CEP290-208ENST00000604024 USP43Q70EL4 1123 aa1.71□□□□□ -2.14
CEP290-208ENST00000604024 COL23A1Q86Y22 540 aaPredicted RBP1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms