RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 TASP1Q9H6P5 420 aa20.78■□□□□ 0.92
SHKBP1-214ENST00000597396 KCNK12Q9HB15 430 aa20.78■□□□□ 0.92
SHKBP1-214ENST00000597396 PNPLA8Q9NP80 782 aa20.78■□□□□ 0.92
SHKBP1-214ENST00000597396 FAM207AQ9NSI2 230 aaPredicted RBP20.78■□□□□ 0.92
SHKBP1-214ENST00000597396 COMMD8Q9NX08 183 aa20.78■□□□□ 0.92
SHKBP1-214ENST00000597396 TRPM5Q9NZQ8 1165 aa20.78■□□□□ 0.92
SHKBP1-214ENST00000597396 MUTYHQ9UIF7 546 aa20.78■□□□□ 0.92
SHKBP1-214ENST00000597396 ZMYM5Q9UJ78 669 aa20.78■□□□□ 0.92
SHKBP1-214ENST00000597396 TNFRSF10BO14763 440 aa20.77■□□□□ 0.92
SHKBP1-214ENST00000597396 TADA3O75528 432 aa20.77■□□□□ 0.92
SHKBP1-214ENST00000597396 DDX6P26196 483 aaKnown RBP eCLIP20.77■□□□□ 0.92
SHKBP1-214ENST00000597396 GNA15P30679 374 aa20.77■□□□□ 0.92
SHKBP1-214ENST00000597396 BST2Q10589 180 aaKnown RBP20.77■□□□□ 0.92
SHKBP1-214ENST00000597396 TAF10Q12962 218 aa20.77■□□□□ 0.92
SHKBP1-214ENST00000597396 HTR4Q13639 388 aa20.77■□□□□ 0.92
SHKBP1-214ENST00000597396 DRAP1Q14919 205 aaPredicted RBP20.77■□□□□ 0.92
SHKBP1-214ENST00000597396 CNGA2Q16280 664 aa20.77■□□□□ 0.92
SHKBP1-214ENST00000597396 POTEHQ6S545 545 aa20.77■□□□□ 0.92
SHKBP1-214ENST00000597396 PARM1Q6UWI2 310 aa20.77■□□□□ 0.92
SHKBP1-214ENST00000597396 LCLAT1Q6UWP7 414 aa20.77■□□□□ 0.92
SHKBP1-214ENST00000597396 TTC30AQ86WT1 665 aa20.77■□□□□ 0.92
SHKBP1-214ENST00000597396 NEK11Q8NG66 645 aa20.77■□□□□ 0.92
SHKBP1-214ENST00000597396 SCAMP5Q8TAC9 235 aa20.77■□□□□ 0.92
SHKBP1-214ENST00000597396 UBA3Q8TBC4 463 aa20.77■□□□□ 0.92
SHKBP1-214ENST00000597396 ZSCAN18Q8TBC5 510 aaPredicted RBP20.77■□□□□ 0.92
SHKBP1-214ENST00000597396 RSAD2Q8WXG1 361 aa20.77■□□□□ 0.92
SHKBP1-214ENST00000597396 ZSWIM3Q96MP5 696 aa20.77■□□□□ 0.92
SHKBP1-214ENST00000597396 ERGIC2Q96RQ1 377 aa20.77■□□□□ 0.92
SHKBP1-214ENST00000597396 GANQ9H2C0 597 aa20.77■□□□□ 0.92
SHKBP1-214ENST00000597396 FBXO44Q9H4M3 255 aa20.77■□□□□ 0.92
SHKBP1-214ENST00000597396 TRPC7Q9HCX4 862 aa20.77■□□□□ 0.92
SHKBP1-214ENST00000597396 RTN4Q9NQC3 1192 aaKnown RBP20.77■□□□□ 0.92
SHKBP1-214ENST00000597396 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.77■□□□□ 0.92
SHKBP1-214ENST00000597396 SIK3Q9Y2K2 1263 aa20.77■□□□□ 0.92
SHKBP1-214ENST00000597396 NUMBLQ9Y6R0 609 aa20.77■□□□□ 0.92
SHKBP1-214ENST00000597396 ANHXE9PGG2 379 aa20.76■□□□□ 0.91
SHKBP1-214ENST00000597396 M0QYV0 167 aa20.76■□□□□ 0.91
SHKBP1-214ENST00000597396 THAP12O43422 761 aa20.76■□□□□ 0.91
SHKBP1-214ENST00000597396 MED7O43513 233 aa20.76■□□□□ 0.91
SHKBP1-214ENST00000597396 ABL1P00519 1130 aa20.76■□□□□ 0.91
SHKBP1-214ENST00000597396 POLR2FP61218 127 aaKnown RBP20.76■□□□□ 0.91
SHKBP1-214ENST00000597396 PDE4CQ08493 712 aa20.76■□□□□ 0.91
SHKBP1-214ENST00000597396 PTPN21Q16825 1174 aa20.76■□□□□ 0.91
SHKBP1-214ENST00000597396 FAM78AQ5JUQ0 283 aa20.76■□□□□ 0.91
SHKBP1-214ENST00000597396 SMYD5Q6GMV2 418 aa20.76■□□□□ 0.91
SHKBP1-214ENST00000597396 MAB21L3Q8N8X9 362 aa20.76■□□□□ 0.91
SHKBP1-214ENST00000597396 PDZD8Q8NEN9 1154 aa20.76■□□□□ 0.91
SHKBP1-214ENST00000597396 FGF14Q92915 247 aa20.76■□□□□ 0.91
SHKBP1-214ENST00000597396 SMARCD2Q92925 531 aa20.76■□□□□ 0.91
SHKBP1-214ENST00000597396 ASB16Q96NS5 453 aa20.76■□□□□ 0.91
SHKBP1-214ENST00000597396 KXD1Q9BQD3 176 aa20.76■□□□□ 0.91
SHKBP1-214ENST00000597396 ZFP14Q9HCL3 533 aa20.76■□□□□ 0.91
SHKBP1-214ENST00000597396 SORCS3Q9UPU3 1222 aa20.76■□□□□ 0.91
SHKBP1-214ENST00000597396 DAAM1Q9Y4D1 1078 aa20.76■□□□□ 0.91
SHKBP1-214ENST00000597396 HHLA1C9JL84 531 aa20.75■□□□□ 0.91
SHKBP1-214ENST00000597396 FOXN3O00409 490 aaPredicted RBP20.75■□□□□ 0.91
SHKBP1-214ENST00000597396 XPO1O14980 1071 aaKnown RBP20.75■□□□□ 0.91
SHKBP1-214ENST00000597396 CYP26A1O43174 497 aa20.75■□□□□ 0.91
SHKBP1-214ENST00000597396 TEX33O43247 280 aa20.75■□□□□ 0.91
SHKBP1-214ENST00000597396 PNMA6AP0CW24 399 aaPredicted RBP20.75■□□□□ 0.91
SHKBP1-214ENST00000597396 SETSIPP0DME0 302 aa20.75■□□□□ 0.91
SHKBP1-214ENST00000597396 PPP3CCP48454 512 aa20.75■□□□□ 0.91
SHKBP1-214ENST00000597396 FANCCQ00597 558 aa20.75■□□□□ 0.91
SHKBP1-214ENST00000597396 PTK2Q05397 1052 aa20.75■□□□□ 0.91
SHKBP1-214ENST00000597396 TDGQ13569 410 aa20.75■□□□□ 0.91
SHKBP1-214ENST00000597396 TXNDC8Q6A555 127 aa20.75■□□□□ 0.91
SHKBP1-214ENST00000597396 GPRIN1Q7Z2K8 1008 aa20.75■□□□□ 0.91
SHKBP1-214ENST00000597396 PIGZQ86VD9 579 aa20.75■□□□□ 0.91
SHKBP1-214ENST00000597396 MON1AQ86VX9 555 aa20.75■□□□□ 0.91
SHKBP1-214ENST00000597396 OVCA2Q8WZ82 227 aa20.75■□□□□ 0.91
SHKBP1-214ENST00000597396 ZSWIM1Q9BR11 485 aa20.75■□□□□ 0.91
SHKBP1-214ENST00000597396 NAA15Q9BXJ9 866 aaKnown RBP20.75■□□□□ 0.91
SHKBP1-214ENST00000597396 STK33Q9BYT3 514 aa20.75■□□□□ 0.91
SHKBP1-214ENST00000597396 IL37Q9NZH6 218 aa20.75■□□□□ 0.91
SHKBP1-214ENST00000597396 A0A1B0GTH6 734 aa20.74■□□□□ 0.91
SHKBP1-214ENST00000597396 SOBPA7XYQ1 873 aa20.74■□□□□ 0.91
SHKBP1-214ENST00000597396 AVPR1AP37288 418 aa20.74■□□□□ 0.91
SHKBP1-214ENST00000597396 ZNF445P59923 1031 aa20.74■□□□□ 0.91
SHKBP1-214ENST00000597396 TANGO2Q6ICL3 276 aa20.74■□□□□ 0.91
SHKBP1-214ENST00000597396 ARID3BQ8IVW6 561 aaPredicted RBP20.74■□□□□ 0.91
SHKBP1-214ENST00000597396 ZNF606Q8WXB4 792 aa20.74■□□□□ 0.91
SHKBP1-214ENST00000597396 SLC46A2Q9BY10 475 aa20.74■□□□□ 0.91
SHKBP1-214ENST00000597396 UBXN6Q9BZV1 441 aa20.74■□□□□ 0.91
SHKBP1-214ENST00000597396 ACP6Q9NPH0 428 aa20.74■□□□□ 0.91
SHKBP1-214ENST00000597396 NLRC4Q9NPP4 1024 aa20.74■□□□□ 0.91
SHKBP1-214ENST00000597396 TRAV19A0A0A6YYK7 116 aa20.73■□□□□ 0.91
SHKBP1-214ENST00000597396 ZNF840PA6NDX5 716 aa20.73■□□□□ 0.91
SHKBP1-214ENST00000597396 DPYSL4O14531 572 aa20.73■□□□□ 0.91
SHKBP1-214ENST00000597396 ECI2O75521 394 aa20.73■□□□□ 0.91
SHKBP1-214ENST00000597396 KIF11P52732 1056 aa20.73■□□□□ 0.91
SHKBP1-214ENST00000597396 BPIFB4P59827 614 aa20.73■□□□□ 0.91
SHKBP1-214ENST00000597396 GPIHBP1Q8IV16 184 aa20.73■□□□□ 0.91
SHKBP1-214ENST00000597396 FAM71AQ8IYT1 594 aa20.73■□□□□ 0.91
SHKBP1-214ENST00000597396 CMTM8Q8IZV2 173 aa20.73■□□□□ 0.91
SHKBP1-214ENST00000597396 RNF214Q8ND24 703 aa20.73■□□□□ 0.91
SHKBP1-214ENST00000597396 SECISBP2LQ93073 1101 aaKnown RBP20.73■□□□□ 0.91
SHKBP1-214ENST00000597396 E2F7Q96AV8 911 aa20.73■□□□□ 0.91
SHKBP1-214ENST00000597396 ELSPBP1Q96BH3 223 aa20.73■□□□□ 0.91
SHKBP1-214ENST00000597396 NAP1L5Q96NT1 182 aaPredicted RBP20.73■□□□□ 0.91
SHKBP1-214ENST00000597396 SPAG5Q96R06 1193 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms