RNA–Protein interactions for RNA: ENST00000588629.1

ATP6V0A1-218, Transcript of ATPase H+ transporting V0 subunit a1, humanhuman

TSL 2

Gene ATP6V0A1, Length 1,797 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1-218ENST00000588629 PLVAPQ9BX97 442 aa20.45■□□□□ 0.86
ATP6V0A1-218ENST00000588629 LRRC4Q9HBW1 653 aa20.45■□□□□ 0.86
ATP6V0A1-218ENST00000588629 MTUS1Q9ULD2 1270 aa20.45■□□□□ 0.86
ATP6V0A1-218ENST00000588629 YBX2Q9Y2T7 364 aaKnown RBP20.45■□□□□ 0.86
ATP6V0A1-218ENST00000588629 LAMA3Q16787 3333 aa20.45■□□□□ 0.86
ATP6V0A1-218ENST00000588629 TMEM191CA6NGB0 347 aa20.44■□□□□ 0.86
ATP6V0A1-218ENST00000588629 C5orf67F2Z3F1 127 aa20.44■□□□□ 0.86
ATP6V0A1-218ENST00000588629 ENC1O14682 589 aa20.44■□□□□ 0.86
ATP6V0A1-218ENST00000588629 LILRB3O75022 631 aa20.44■□□□□ 0.86
ATP6V0A1-218ENST00000588629 CASQ1P31415 396 aa20.44■□□□□ 0.86
ATP6V0A1-218ENST00000588629 PBX2P40425 430 aa20.44■□□□□ 0.86
ATP6V0A1-218ENST00000588629 TKTL1P51854 596 aa20.44■□□□□ 0.86
ATP6V0A1-218ENST00000588629 ADCY1Q08828 1119 aa20.44■□□□□ 0.86
ATP6V0A1-218ENST00000588629 MESDQ14696 234 aa20.44■□□□□ 0.86
ATP6V0A1-218ENST00000588629 PTPROQ16827 1216 aa20.44■□□□□ 0.86
ATP6V0A1-218ENST00000588629 VSTM1Q6UX27 236 aa20.44■□□□□ 0.86
ATP6V0A1-218ENST00000588629 ZDHHC17Q8IUH5 632 aa20.44■□□□□ 0.86
ATP6V0A1-218ENST00000588629 SPPL2BQ8TCT7 592 aa20.44■□□□□ 0.86
ATP6V0A1-218ENST00000588629 PNPLA8Q9NP80 782 aa20.44■□□□□ 0.86
ATP6V0A1-218ENST00000588629 PCDHA11Q9Y5I1 949 aa20.44■□□□□ 0.86
ATP6V0A1-218ENST00000588629 RFC1P35251 1148 aaPredicted RBP20.44■□□□□ 0.86
ATP6V0A1-218ENST00000588629 MAGEA11P43364 429 aa20.44■□□□□ 0.86
ATP6V0A1-218ENST00000588629 GPR15P49685 360 aa20.44■□□□□ 0.86
ATP6V0A1-218ENST00000588629 SLC6A3Q01959 620 aa20.44■□□□□ 0.86
ATP6V0A1-218ENST00000588629 OGDHQ02218 1023 aa20.44■□□□□ 0.86
ATP6V0A1-218ENST00000588629 TAF5Q15542 800 aa20.44■□□□□ 0.86
ATP6V0A1-218ENST00000588629 C11orf63Q6NUN7 778 aa20.44■□□□□ 0.86
ATP6V0A1-218ENST00000588629 DCUN1D2Q6PH85 259 aa20.44■□□□□ 0.86
ATP6V0A1-218ENST00000588629 SCN4BQ8IWT1 228 aa20.44■□□□□ 0.86
ATP6V0A1-218ENST00000588629 GPR65Q8IYL9 337 aa20.44■□□□□ 0.86
ATP6V0A1-218ENST00000588629 C2orf15Q8WU43 125 aaKnown RBP20.44■□□□□ 0.86
ATP6V0A1-218ENST00000588629 KHSRPQ92945 711 aaKnown RBP eCLIP20.44■□□□□ 0.86
ATP6V0A1-218ENST00000588629 SLC27A5Q9Y2P5 690 aa20.44■□□□□ 0.86
ATP6V0A1-218ENST00000588629 HYOU1Q9Y4L1 999 aa20.44■□□□□ 0.86
ATP6V0A1-218ENST00000588629 PATJQ8NI35 1801 aa20.43■□□□□ 0.86
ATP6V0A1-218ENST00000588629 TMEM110-MUSTN1A8MSY1 372 aa20.43■□□□□ 0.86
ATP6V0A1-218ENST00000588629 MYO1FO00160 1098 aa20.43■□□□□ 0.86
ATP6V0A1-218ENST00000588629 ATP1A1P05023 1023 aaKnown RBP20.43■□□□□ 0.86
ATP6V0A1-218ENST00000588629 TAP1Q03518 808 aa20.43■□□□□ 0.86
ATP6V0A1-218ENST00000588629 ZNF252P-AS1Q0IIN9 211 aa20.43■□□□□ 0.86
ATP6V0A1-218ENST00000588629 CPNE8Q86YQ8 564 aa20.43■□□□□ 0.86
ATP6V0A1-218ENST00000588629 SYCE1Q8N0S2 351 aa20.43■□□□□ 0.86
ATP6V0A1-218ENST00000588629 SIX6OS1Q8N1H7 587 aa20.43■□□□□ 0.86
ATP6V0A1-218ENST00000588629 EMC1Q8N766 993 aa20.43■□□□□ 0.86
ATP6V0A1-218ENST00000588629 KIF18AQ8NI77 898 aa20.43■□□□□ 0.86
ATP6V0A1-218ENST00000588629 NDRG1Q92597 394 aaKnown RBP20.43■□□□□ 0.86
ATP6V0A1-218ENST00000588629 PBX4Q9BYU1 374 aa20.43■□□□□ 0.86
ATP6V0A1-218ENST00000588629 TMEM59LQ9UK28 342 aa20.43■□□□□ 0.86
ATP6V0A1-218ENST00000588629 LZTS1Q9Y250 596 aa20.43■□□□□ 0.86
ATP6V0A1-218ENST00000588629 JRKLQ9Y4A0 524 aa20.43■□□□□ 0.86
ATP6V0A1-218ENST00000588629 CHD7Q9P2D1 2997 aa20.42■□□□□ 0.86
ATP6V0A1-218ENST00000588629 CTAGE9A4FU28 777 aa20.42■□□□□ 0.86
ATP6V0A1-218ENST00000588629 TNFRSF10BO14763 440 aa20.42■□□□□ 0.86
ATP6V0A1-218ENST00000588629 GRAP2O75791 330 aa20.42■□□□□ 0.86
ATP6V0A1-218ENST00000588629 SOAT2O75908 522 aa20.42■□□□□ 0.86
ATP6V0A1-218ENST00000588629 ABLIM3O94929 683 aa20.42■□□□□ 0.86
ATP6V0A1-218ENST00000588629 DNAJB1P25685 340 aa20.42■□□□□ 0.86
ATP6V0A1-218ENST00000588629 ERVFC1P60507 584 aa20.42■□□□□ 0.86
ATP6V0A1-218ENST00000588629 DUSP4Q13115 394 aa20.42■□□□□ 0.86
ATP6V0A1-218ENST00000588629 DDR2Q16832 855 aa20.42■□□□□ 0.86
ATP6V0A1-218ENST00000588629 MGAT5BQ3V5L5 792 aa20.42■□□□□ 0.86
ATP6V0A1-218ENST00000588629 SDHAF4Q5VUM1 108 aa20.42■□□□□ 0.86
ATP6V0A1-218ENST00000588629 NT5DC3Q86UY8 548 aa20.42■□□□□ 0.86
ATP6V0A1-218ENST00000588629 ZNF461Q8TAF7 563 aa20.42■□□□□ 0.86
ATP6V0A1-218ENST00000588629 SPPL3Q8TCT6 385 aa20.42■□□□□ 0.86
ATP6V0A1-218ENST00000588629 NAPGQ99747 312 aaPredicted RBP20.42■□□□□ 0.86
ATP6V0A1-218ENST00000588629 ULBP1Q9BZM6 244 aa20.42■□□□□ 0.86
ATP6V0A1-218ENST00000588629 RXFP1Q9HBX9 757 aa20.42■□□□□ 0.86
ATP6V0A1-218ENST00000588629 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.42■□□□□ 0.86
ATP6V0A1-218ENST00000588629 FNIP2Q9P278 1114 aa20.42■□□□□ 0.86
ATP6V0A1-218ENST00000588629 PACSIN2Q9UNF0 486 aaPredicted RBP20.42■□□□□ 0.86
ATP6V0A1-218ENST00000588629 ALG6Q9Y672 507 aa20.42■□□□□ 0.86
ATP6V0A1-218ENST00000588629 TRIM66O15016 1216 aa20.41■□□□□ 0.86
ATP6V0A1-218ENST00000588629 TEX28O15482 410 aa20.41■□□□□ 0.86
ATP6V0A1-218ENST00000588629 NCK2O43639 380 aa20.41■□□□□ 0.86
ATP6V0A1-218ENST00000588629 HAPLN1P10915 354 aaPredicted RBP20.41■□□□□ 0.86
ATP6V0A1-218ENST00000588629 COMTP21964 271 aa20.41■□□□□ 0.86
ATP6V0A1-218ENST00000588629 SLC5A3P53794 718 aa20.41■□□□□ 0.86
ATP6V0A1-218ENST00000588629 RNASE9P60153 205 aaKnown RBP20.41■□□□□ 0.86
ATP6V0A1-218ENST00000588629 MRPS5P82675 430 aaKnown RBP20.41■□□□□ 0.86
ATP6V0A1-218ENST00000588629 RAB33AQ14088 237 aa20.41■□□□□ 0.86
ATP6V0A1-218ENST00000588629 MEI1Q5TIA1 1274 aa20.41■□□□□ 0.86
ATP6V0A1-218ENST00000588629 TRNP1Q6NT89 227 aa20.41■□□□□ 0.86
ATP6V0A1-218ENST00000588629 SLC26A9Q7LBE3 791 aa20.41■□□□□ 0.86
ATP6V0A1-218ENST00000588629 TMC7Q7Z402 723 aa20.41■□□□□ 0.86
ATP6V0A1-218ENST00000588629 STKLD1Q8NE28 680 aa20.41■□□□□ 0.86
ATP6V0A1-218ENST00000588629 SCAMP5Q8TAC9 235 aa20.41■□□□□ 0.86
ATP6V0A1-218ENST00000588629 POF1BQ8WVV4 589 aa20.41■□□□□ 0.86
ATP6V0A1-218ENST00000588629 C8orf48Q96LL4 319 aa20.41■□□□□ 0.86
ATP6V0A1-218ENST00000588629 SEPT5Q99719 369 aaPredicted RBP20.41■□□□□ 0.86
ATP6V0A1-218ENST00000588629 TCF25Q9BQ70 676 aa20.41■□□□□ 0.86
ATP6V0A1-218ENST00000588629 CNGB3Q9NQW8 809 aa20.41■□□□□ 0.86
ATP6V0A1-218ENST00000588629 TNRC18O15417 2968 aaPredicted RBP20.41■□□□□ 0.86
ATP6V0A1-218ENST00000588629 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.41■□□□□ 0.86
ATP6V0A1-218ENST00000588629 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.41■□□□□ 0.86
ATP6V0A1-218ENST00000588629 CSPG5O95196 566 aa20.41■□□□□ 0.86
ATP6V0A1-218ENST00000588629 CNPP09543 421 aaKnown RBP20.41■□□□□ 0.86
ATP6V0A1-218ENST00000588629 FLT3P36888 993 aa20.41■□□□□ 0.86
ATP6V0A1-218ENST00000588629 SCNN1AP37088 669 aa20.41■□□□□ 0.86
ATP6V0A1-218ENST00000588629 PEX26Q7Z412 305 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms