RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 PATJQ8NI35 1801 aa22.77■■□□□ 1.24
PPP4R1-228ENST00000584074 CACNA1IQ9P0X4 2223 aa22.77■■□□□ 1.24
PPP4R1-228ENST00000584074 TRIM49BA6NDI0 452 aa22.76■■□□□ 1.23
PPP4R1-228ENST00000584074 TNFRSF10BO14763 440 aa22.76■■□□□ 1.23
PPP4R1-228ENST00000584074 KINO60870 393 aaKnown RBP22.76■■□□□ 1.23
PPP4R1-228ENST00000584074 AP1G2O75843 785 aa22.76■■□□□ 1.23
PPP4R1-228ENST00000584074 YWHAQP27348 245 aa22.76■■□□□ 1.23
PPP4R1-228ENST00000584074 PDE6CP51160 858 aa22.76■■□□□ 1.23
PPP4R1-228ENST00000584074 ZXDBP98169 803 aa22.76■■□□□ 1.23
PPP4R1-228ENST00000584074 INCA1Q0VD86 236 aa22.76■■□□□ 1.23
PPP4R1-228ENST00000584074 MAMSTRQ6ZN01 415 aa22.76■■□□□ 1.23
PPP4R1-228ENST00000584074 Q6ZS52 159 aa22.76■■□□□ 1.23
PPP4R1-228ENST00000584074 ZC3H3Q8IXZ2 948 aaKnown RBP22.76■■□□□ 1.23
PPP4R1-228ENST00000584074 CCDC150Q8NCX0 1101 aa22.76■■□□□ 1.23
PPP4R1-228ENST00000584074 OSCP1Q8WVF1 389 aa22.76■■□□□ 1.23
PPP4R1-228ENST00000584074 SLITRK1Q96PX8 696 aa22.76■■□□□ 1.23
PPP4R1-228ENST00000584074 SMOQ99835 787 aa22.76■■□□□ 1.23
PPP4R1-228ENST00000584074 IER2Q9BTL4 223 aa22.76■■□□□ 1.23
PPP4R1-228ENST00000584074 SEMA4AQ9H3S1 761 aa22.76■■□□□ 1.23
PPP4R1-228ENST00000584074 CYP3A43Q9HB55 503 aa22.76■■□□□ 1.23
PPP4R1-228ENST00000584074 MAN1B1Q9UKM7 699 aa22.76■■□□□ 1.23
PPP4R1-228ENST00000584074 GREB1Q4ZG55 1949 aa22.76■■□□□ 1.23
PPP4R1-228ENST00000584074 KIF26AQ9ULI4 1882 aaPredicted RBP22.75■■□□□ 1.23
PPP4R1-228ENST00000584074 BEST1O76090 585 aa22.75■■□□□ 1.23
PPP4R1-228ENST00000584074 RTN3O95197 1032 aaPredicted RBP22.75■■□□□ 1.23
PPP4R1-228ENST00000584074 LMNAP02545 664 aaKnown RBP22.75■■□□□ 1.23
PPP4R1-228ENST00000584074 PFKLP17858 780 aa22.75■■□□□ 1.23
PPP4R1-228ENST00000584074 CD58P19256 250 aa22.75■■□□□ 1.23
PPP4R1-228ENST00000584074 MXI1P50539 228 aa22.75■■□□□ 1.23
PPP4R1-228ENST00000584074 FKBP3Q00688 224 aaKnown RBP22.75■■□□□ 1.23
PPP4R1-228ENST00000584074 CCINQ13939 588 aa22.75■■□□□ 1.23
PPP4R1-228ENST00000584074 ELOA2Q8IYF1 753 aaPredicted RBP22.75■■□□□ 1.23
PPP4R1-228ENST00000584074 GTPBP4Q9BZE4 634 aaKnown RBP22.75■■□□□ 1.23
PPP4R1-228ENST00000584074 CHORDC1Q9UHD1 332 aaPredicted RBP22.75■■□□□ 1.23
PPP4R1-228ENST00000584074 CIZ1Q9ULV3 898 aaPredicted RBP22.75■■□□□ 1.23
PPP4R1-228ENST00000584074 SLC16A3O15427 465 aaKnown RBP22.74■■□□□ 1.23
PPP4R1-228ENST00000584074 STX10O60499 249 aa22.74■■□□□ 1.23
PPP4R1-228ENST00000584074 OAS1P00973 400 aaKnown RBP22.74■■□□□ 1.23
PPP4R1-228ENST00000584074 CD44P16070 742 aaKnown RBP22.74■■□□□ 1.23
PPP4R1-228ENST00000584074 IFNAR2P48551 515 aa22.74■■□□□ 1.23
PPP4R1-228ENST00000584074 SLC5A3P53794 718 aa22.74■■□□□ 1.23
PPP4R1-228ENST00000584074 SLC7A9P82251 487 aa22.74■■□□□ 1.23
PPP4R1-228ENST00000584074 SATB1Q01826 763 aa22.74■■□□□ 1.23
PPP4R1-228ENST00000584074 LRRC63Q05C16 580 aa22.74■■□□□ 1.23
PPP4R1-228ENST00000584074 DGKKQ5KSL6 1271 aa22.74■■□□□ 1.23
PPP4R1-228ENST00000584074 FBXL13Q8NEE6 735 aa22.74■■□□□ 1.23
PPP4R1-228ENST00000584074 ZMIZ2Q8NF64 920 aa22.74■■□□□ 1.23
PPP4R1-228ENST00000584074 WHAMMQ8TF30 809 aa22.74■■□□□ 1.23
PPP4R1-228ENST00000584074 NELL1Q92832 810 aa22.74■■□□□ 1.23
PPP4R1-228ENST00000584074 FBXO32Q969P5 355 aa22.74■■□□□ 1.23
PPP4R1-228ENST00000584074 NT5C1AQ9BXI3 368 aa22.74■■□□□ 1.23
PPP4R1-228ENST00000584074 LINC00597Q9H2U6 94 aa22.74■■□□□ 1.23
PPP4R1-228ENST00000584074 ECT2Q9H8V3 914 aa22.74■■□□□ 1.23
PPP4R1-228ENST00000584074 RAB20Q9NX57 234 aa22.74■■□□□ 1.23
PPP4R1-228ENST00000584074 SMPD4Q9NXE4 827 aa22.74■■□□□ 1.23
PPP4R1-228ENST00000584074 IL37Q9NZH6 218 aa22.74■■□□□ 1.23
PPP4R1-228ENST00000584074 LEFTY2O00292 366 aa22.73■■□□□ 1.23
PPP4R1-228ENST00000584074 OLFM2O95897 454 aa22.73■■□□□ 1.23
PPP4R1-228ENST00000584074 TDGF1P13385 188 aa22.73■■□□□ 1.23
PPP4R1-228ENST00000584074 TCF3P15923 654 aa22.73■■□□□ 1.23
PPP4R1-228ENST00000584074 ADORA2BP29275 332 aa22.73■■□□□ 1.23
PPP4R1-228ENST00000584074 MAP3K7CLP57077 242 aa22.73■■□□□ 1.23
PPP4R1-228ENST00000584074 EML3Q32P44 896 aa22.73■■□□□ 1.23
PPP4R1-228ENST00000584074 CBWD6Q4V339 395 aa22.73■■□□□ 1.23
PPP4R1-228ENST00000584074 DCAF17Q5H9S7 520 aaPredicted RBP22.73■■□□□ 1.23
PPP4R1-228ENST00000584074 CBWD3Q5JTY5 395 aa22.73■■□□□ 1.23
PPP4R1-228ENST00000584074 CBWD5Q5RIA9 395 aa22.73■■□□□ 1.23
PPP4R1-228ENST00000584074 TCERG1LQ5VWI1 586 aa22.73■■□□□ 1.23
PPP4R1-228ENST00000584074 NAIF1Q69YI7 327 aaPredicted RBP22.73■■□□□ 1.23
PPP4R1-228ENST00000584074 SPEM1Q8N4L4 309 aa22.73■■□□□ 1.23
PPP4R1-228ENST00000584074 CPA6Q8N4T0 437 aa22.73■■□□□ 1.23
PPP4R1-228ENST00000584074 ZBTB44Q8NCP5 570 aa22.73■■□□□ 1.23
PPP4R1-228ENST00000584074 ATRIPQ8WXE1 791 aa22.73■■□□□ 1.23
PPP4R1-228ENST00000584074 ATP2A3Q93084 1043 aa22.73■■□□□ 1.23
PPP4R1-228ENST00000584074 FBRSL1Q9HCM7 1045 aaKnown RBP22.73■■□□□ 1.23
PPP4R1-228ENST00000584074 CSNK1G1Q9HCP0 422 aa22.73■■□□□ 1.23
PPP4R1-228ENST00000584074 ZSCAN32Q9NX65 697 aa22.73■■□□□ 1.23
PPP4R1-228ENST00000584074 PCDHGA2Q9Y5H1 932 aa22.73■■□□□ 1.23
PPP4R1-228ENST00000584074 CPQQ9Y646 472 aa22.73■■□□□ 1.23
PPP4R1-228ENST00000584074 PSMA7O14818 248 aa22.72■■□□□ 1.23
PPP4R1-228ENST00000584074 CILPO75339 1184 aa22.72■■□□□ 1.23
PPP4R1-228ENST00000584074 BMP6P22004 513 aa22.72■■□□□ 1.23
PPP4R1-228ENST00000584074 GJA4P35212 333 aa22.72■■□□□ 1.23
PPP4R1-228ENST00000584074 CXCL12P48061 93 aa22.72■■□□□ 1.23
PPP4R1-228ENST00000584074 CCR3P51677 355 aa22.72■■□□□ 1.23
PPP4R1-228ENST00000584074 STIM1Q13586 685 aa22.72■■□□□ 1.23
PPP4R1-228ENST00000584074 TMEM196Q5HYL7 178 aa22.72■■□□□ 1.23
PPP4R1-228ENST00000584074 FSTL4Q6MZW2 842 aa22.72■■□□□ 1.23
PPP4R1-228ENST00000584074 PDZD8Q8NEN9 1154 aa22.72■■□□□ 1.23
PPP4R1-228ENST00000584074 OVCA2Q8WZ82 227 aa22.72■■□□□ 1.23
PPP4R1-228ENST00000584074 CYFIP2Q96F07 1278 aa22.72■■□□□ 1.23
PPP4R1-228ENST00000584074 DHTKD1Q96HY7 919 aaPredicted RBP22.72■■□□□ 1.23
PPP4R1-228ENST00000584074 HNRNPABQ99729 332 aaKnown RBP22.72■■□□□ 1.23
PPP4R1-228ENST00000584074 C2orf42Q9NWW7 574 aa22.72■■□□□ 1.23
PPP4R1-228ENST00000584074 GMIPQ9P107 970 aa22.72■■□□□ 1.23
PPP4R1-228ENST00000584074 ANAPC1Q9H1A4 1944 aa22.72■■□□□ 1.23
PPP4R1-228ENST00000584074 TRDMT1O14717 391 aaKnown RBP22.71■■□□□ 1.23
PPP4R1-228ENST00000584074 SCAMP3O14828 347 aaKnown RBP22.71■■□□□ 1.23
PPP4R1-228ENST00000584074 FAM200BP0CF97 657 aa22.71■■□□□ 1.23
PPP4R1-228ENST00000584074 TRIM21P19474 475 aaKnown RBP22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms