RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 PDGFRBP09619 1106 aa10.11□□□□□ -0.79
NPLOC4-219ENST00000576713 HOXB8P17481 243 aaPredicted RBP10.11□□□□□ -0.79
NPLOC4-219ENST00000576713 ATF6P18850 670 aa10.11□□□□□ -0.79
NPLOC4-219ENST00000576713 PAX3P23760 479 aa10.11□□□□□ -0.79
NPLOC4-219ENST00000576713 ATICP31939 592 aa10.11□□□□□ -0.79
NPLOC4-219ENST00000576713 GTF2H1P32780 548 aa10.11□□□□□ -0.79
NPLOC4-219ENST00000576713 FMO5P49326 533 aa10.11□□□□□ -0.79
NPLOC4-219ENST00000576713 GPR15P49685 360 aa10.11□□□□□ -0.79
NPLOC4-219ENST00000576713 CACNA2D1P54289 1103 aa10.11□□□□□ -0.79
NPLOC4-219ENST00000576713 MYO1EQ12965 1108 aa10.11□□□□□ -0.79
NPLOC4-219ENST00000576713 DUSP4Q13115 394 aa10.11□□□□□ -0.79
NPLOC4-219ENST00000576713 NCAPHQ15003 741 aa10.11□□□□□ -0.79
NPLOC4-219ENST00000576713 KRT39Q6A163 491 aa10.11□□□□□ -0.79
NPLOC4-219ENST00000576713 TCEAL8Q8IYN2 117 aa10.11□□□□□ -0.79
NPLOC4-219ENST00000576713 CMASQ8NFW8 434 aaPredicted RBP10.11□□□□□ -0.79
NPLOC4-219ENST00000576713 WHAMMQ8TF30 809 aa10.11□□□□□ -0.79
NPLOC4-219ENST00000576713 KAT5Q92993 513 aa10.11□□□□□ -0.79
NPLOC4-219ENST00000576713 SYAP1Q96A49 352 aaPredicted RBP10.11□□□□□ -0.79
NPLOC4-219ENST00000576713 ABHD17AQ96GS6 310 aa10.11□□□□□ -0.79
NPLOC4-219ENST00000576713 BCO2Q9BYV7 579 aa10.11□□□□□ -0.79
NPLOC4-219ENST00000576713 PLEKHA4Q9H4M7 779 aa10.11□□□□□ -0.79
NPLOC4-219ENST00000576713 CYP4F11Q9HBI6 524 aa10.11□□□□□ -0.79
NPLOC4-219ENST00000576713 BRD7Q9NPI1 651 aa10.11□□□□□ -0.79
NPLOC4-219ENST00000576713 RAB20Q9NX57 234 aa10.11□□□□□ -0.79
NPLOC4-219ENST00000576713 CEP72Q9P209 647 aa10.11□□□□□ -0.79
NPLOC4-219ENST00000576713 AFF4Q9UHB7 1163 aaKnown RBP10.11□□□□□ -0.79
NPLOC4-219ENST00000576713 DSEQ9UL01 958 aa10.11□□□□□ -0.79
NPLOC4-219ENST00000576713 INSL5Q9Y5Q6 135 aa10.11□□□□□ -0.79
NPLOC4-219ENST00000576713 TTC28Q96AY4 2481 aa10.1□□□□□ -0.79
NPLOC4-219ENST00000576713 ARHGEF37A1IGU5 675 aa10.1□□□□□ -0.79
NPLOC4-219ENST00000576713 SYCE3A1L190 88 aa10.1□□□□□ -0.79
NPLOC4-219ENST00000576713 FSD2A1L4K1 749 aa10.1□□□□□ -0.79
NPLOC4-219ENST00000576713 TACC1O75410 805 aa10.1□□□□□ -0.79
NPLOC4-219ENST00000576713 C1RP00736 705 aa10.1□□□□□ -0.79
NPLOC4-219ENST00000576713 ERCC5P28715 1186 aaPredicted RBP10.1□□□□□ -0.79
NPLOC4-219ENST00000576713 GRNP28799 593 aaKnown RBP10.1□□□□□ -0.79
NPLOC4-219ENST00000576713 CCR2P41597 374 aa10.1□□□□□ -0.79
NPLOC4-219ENST00000576713 TNNC1P63316 161 aa10.1□□□□□ -0.79
NPLOC4-219ENST00000576713 NOP14P78316 857 aaKnown RBP10.1□□□□□ -0.79
NPLOC4-219ENST00000576713 MYL7Q01449 175 aa10.1□□□□□ -0.79
NPLOC4-219ENST00000576713 ZP2Q05996 745 aa10.1□□□□□ -0.79
NPLOC4-219ENST00000576713 CBX2Q14781 532 aaPredicted RBP10.1□□□□□ -0.79
NPLOC4-219ENST00000576713 NFKBIBQ15653 356 aa10.1□□□□□ -0.79
NPLOC4-219ENST00000576713 SLC5A9Q2M3M2 681 aa10.1□□□□□ -0.79
NPLOC4-219ENST00000576713 SGSM1Q2NKQ1 1148 aa10.1□□□□□ -0.79
NPLOC4-219ENST00000576713 ZNF667Q5HYK9 610 aa10.1□□□□□ -0.79
NPLOC4-219ENST00000576713 MIIPQ5JXC2 388 aa10.1□□□□□ -0.79
NPLOC4-219ENST00000576713 SDHAF4Q5VUM1 108 aa10.1□□□□□ -0.79
NPLOC4-219ENST00000576713 TPGS2Q68CL5 300 aa10.1□□□□□ -0.79
NPLOC4-219ENST00000576713 FAM171BQ6P995 826 aa10.1□□□□□ -0.79
NPLOC4-219ENST00000576713 FOXR1Q6PIV2 292 aa10.1□□□□□ -0.79
NPLOC4-219ENST00000576713 PAQR9Q6ZVX9 377 aa10.1□□□□□ -0.79
NPLOC4-219ENST00000576713 DPH6Q7L8W6 267 aa10.1□□□□□ -0.79
NPLOC4-219ENST00000576713 GRASPQ7Z6J2 395 aaPredicted RBP10.1□□□□□ -0.79
NPLOC4-219ENST00000576713 METTL23Q86XA0 190 aa10.1□□□□□ -0.79
NPLOC4-219ENST00000576713 ARHGEF19Q8IW93 802 aa10.1□□□□□ -0.79
NPLOC4-219ENST00000576713 TMEM86AQ8N2M4 240 aa10.1□□□□□ -0.79
NPLOC4-219ENST00000576713 FBXL13Q8NEE6 735 aa10.1□□□□□ -0.79
NPLOC4-219ENST00000576713 ST13P5Q8NFI4 369 aaPredicted RBP10.1□□□□□ -0.79
NPLOC4-219ENST00000576713 GPR152Q8TDT2 470 aa10.1□□□□□ -0.79
NPLOC4-219ENST00000576713 HDAC7Q8WUI4 952 aa10.1□□□□□ -0.79
NPLOC4-219ENST00000576713 SYT15Q9BQS2 421 aa10.1□□□□□ -0.79
NPLOC4-219ENST00000576713 ACBD6Q9BR61 282 aa10.1□□□□□ -0.79
NPLOC4-219ENST00000576713 ZDHHC7Q9NXF8 308 aa10.1□□□□□ -0.79
NPLOC4-219ENST00000576713 DNMT3BQ9UBC3 853 aaKnown RBP10.1□□□□□ -0.79
NPLOC4-219ENST00000576713 AJAP1Q9UKB5 411 aaPredicted RBP10.1□□□□□ -0.79
NPLOC4-219ENST00000576713 YIPF1Q9Y548 306 aa10.1□□□□□ -0.79
NPLOC4-219ENST00000576713 NOTCH4Q99466 2003 aa10.09□□□□□ -0.79
NPLOC4-219ENST00000576713 CLDN5O00501 218 aa10.09□□□□□ -0.79
NPLOC4-219ENST00000576713 PRRG1O14668 218 aa10.09□□□□□ -0.79
NPLOC4-219ENST00000576713 MOSPD3O75425 235 aa10.09□□□□□ -0.79
NPLOC4-219ENST00000576713 CALCAP01258 141 aa10.09□□□□□ -0.79
NPLOC4-219ENST00000576713 SRGAP2BP0DMP2 458 aa10.09□□□□□ -0.79
NPLOC4-219ENST00000576713 CD58P19256 250 aa10.09□□□□□ -0.79
NPLOC4-219ENST00000576713 CYP2F1P24903 491 aa10.09□□□□□ -0.79
NPLOC4-219ENST00000576713 NDST1P52848 882 aa10.09□□□□□ -0.79
NPLOC4-219ENST00000576713 ITIH3Q06033 890 aa10.09□□□□□ -0.79
NPLOC4-219ENST00000576713 TWF1Q12792 350 aa10.09□□□□□ -0.79
NPLOC4-219ENST00000576713 SFSWAPQ12872 951 aaKnown RBP10.09□□□□□ -0.79
NPLOC4-219ENST00000576713 LRMPQ12912 555 aa10.09□□□□□ -0.79
NPLOC4-219ENST00000576713 STX1AQ16623 288 aa10.09□□□□□ -0.79
NPLOC4-219ENST00000576713 ANO6Q4KMQ2 910 aa10.09□□□□□ -0.79
NPLOC4-219ENST00000576713 MDH1BQ5I0G3 518 aa10.09□□□□□ -0.79
NPLOC4-219ENST00000576713 PPM1LQ5SGD2 360 aa10.09□□□□□ -0.79
NPLOC4-219ENST00000576713 TMCO4Q5TGY1 634 aa10.09□□□□□ -0.79
NPLOC4-219ENST00000576713 LIN9Q5TKA1 542 aa10.09□□□□□ -0.79
NPLOC4-219ENST00000576713 CDKAL1Q5VV42 579 aa10.09□□□□□ -0.79
NPLOC4-219ENST00000576713 DPY19L2P1Q6NXN4 242 aa10.09□□□□□ -0.79
NPLOC4-219ENST00000576713 SASS6Q6UVJ0 657 aa10.09□□□□□ -0.79
NPLOC4-219ENST00000576713 RGL4Q8IZJ4 473 aa10.09□□□□□ -0.79
NPLOC4-219ENST00000576713 UBR7Q8N806 425 aa10.09□□□□□ -0.79
NPLOC4-219ENST00000576713 OR6B3Q8NGW1 331 aa10.09□□□□□ -0.79
NPLOC4-219ENST00000576713 ITFG1Q8TB96 612 aa10.09□□□□□ -0.79
NPLOC4-219ENST00000576713 ENOX1Q8TC92 643 aaKnown RBP10.09□□□□□ -0.79
NPLOC4-219ENST00000576713 SMG7Q92540 1137 aaKnown RBP10.09□□□□□ -0.79
NPLOC4-219ENST00000576713 MYLPFQ96A32 169 aa10.09□□□□□ -0.79
NPLOC4-219ENST00000576713 TCEAL4Q96EI5 215 aa10.09□□□□□ -0.79
NPLOC4-219ENST00000576713 LRRC3Q9BY71 257 aa10.09□□□□□ -0.79
NPLOC4-219ENST00000576713 ELOVL4Q9GZR5 314 aa10.09□□□□□ -0.79
NPLOC4-219ENST00000576713 NIF3L1Q9GZT8 377 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms