RNA–Protein interactions for RNA: ENST00000563605.1

AC009088.3-201, humanhuman

TSL 3 BASIC

Gene AC009088.3, Length 357 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009088.3-201ENST00000563605 ZMIZ2Q8NF64 920 aa16.52■□□□□ 0.24
AC009088.3-201ENST00000563605 RIN3Q8TB24 985 aa16.52■□□□□ 0.24
AC009088.3-201ENST00000563605 SH3RF2Q8TEC5 729 aa16.52■□□□□ 0.24
AC009088.3-201ENST00000563605 HNRNPABQ99729 332 aaKnown RBP16.52■□□□□ 0.24
AC009088.3-201ENST00000563605 DNAI2Q9GZS0 605 aa16.52■□□□□ 0.24
AC009088.3-201ENST00000563605 RNF38Q9H0F5 515 aa16.52■□□□□ 0.24
AC009088.3-201ENST00000563605 CLSTN2Q9H4D0 955 aa16.52■□□□□ 0.24
AC009088.3-201ENST00000563605 EBF3Q9H4W6 596 aa16.52■□□□□ 0.24
AC009088.3-201ENST00000563605 KIF9Q9HAQ2 790 aa16.52■□□□□ 0.24
AC009088.3-201ENST00000563605 SPATA6Q9NWH7 488 aaPredicted RBP16.52■□□□□ 0.24
AC009088.3-201ENST00000563605 COQ4Q9Y3A0 265 aa16.52■□□□□ 0.24
AC009088.3-201ENST00000563605 SPECC1L-ADORA2AF8WAN1 911 aa16.51■□□□□ 0.23
AC009088.3-201ENST00000563605 TNFRSF10BO14763 440 aa16.51■□□□□ 0.23
AC009088.3-201ENST00000563605 ARSAP15289 507 aa16.51■□□□□ 0.23
AC009088.3-201ENST00000563605 CUL2Q13617 745 aa16.51■□□□□ 0.23
AC009088.3-201ENST00000563605 ITPRIPL2Q3MIP1 535 aa16.51■□□□□ 0.23
AC009088.3-201ENST00000563605 TMEM176AQ96HP8 235 aa16.51■□□□□ 0.23
AC009088.3-201ENST00000563605 OSBPL6Q9BZF3 934 aa16.51■□□□□ 0.23
AC009088.3-201ENST00000563605 IRF2BPLQ9H1B7 796 aa16.51■□□□□ 0.23
AC009088.3-201ENST00000563605 C8orf33Q9H7E9 229 aaPredicted RBP16.51■□□□□ 0.23
AC009088.3-201ENST00000563605 LMAN1LQ9HAT1 526 aa16.51■□□□□ 0.23
AC009088.3-201ENST00000563605 LMBRD1Q9NUN5 540 aa16.51■□□□□ 0.23
AC009088.3-201ENST00000563605 SMPD4Q9NXE4 827 aa16.51■□□□□ 0.23
AC009088.3-201ENST00000563605 SCAMP3O14828 347 aaKnown RBP16.5■□□□□ 0.23
AC009088.3-201ENST00000563605 PPP3CCP48454 512 aa16.5■□□□□ 0.23
AC009088.3-201ENST00000563605 RAD23BP54727 409 aa16.5■□□□□ 0.23
AC009088.3-201ENST00000563605 RUNX3Q13761 415 aa16.5■□□□□ 0.23
AC009088.3-201ENST00000563605 ZNF268Q14587 947 aaPredicted RBP16.5■□□□□ 0.23
AC009088.3-201ENST00000563605 MTF1Q14872 753 aa16.5■□□□□ 0.23
AC009088.3-201ENST00000563605 PPP1R26Q5T8A7 1209 aaPredicted RBP16.5■□□□□ 0.23
AC009088.3-201ENST00000563605 TXNDC11Q6PKC3 985 aa16.5■□□□□ 0.23
AC009088.3-201ENST00000563605 C1orf210Q8IVY1 113 aa16.5■□□□□ 0.23
AC009088.3-201ENST00000563605 SLC4A11Q8NBS3 891 aa16.5■□□□□ 0.23
AC009088.3-201ENST00000563605 FAM83CQ9BQN1 747 aa16.5■□□□□ 0.23
AC009088.3-201ENST00000563605 NUP62CLQ9H1M0 184 aa16.5■□□□□ 0.23
AC009088.3-201ENST00000563605 LINC00597Q9H2U6 94 aa16.5■□□□□ 0.23
AC009088.3-201ENST00000563605 CSNK1G1Q9HCP0 422 aa16.5■□□□□ 0.23
AC009088.3-201ENST00000563605 HPS4Q9NQG7 708 aa16.5■□□□□ 0.23
AC009088.3-201ENST00000563605 DUS2Q9NX74 493 aaKnown RBP16.5■□□□□ 0.23
AC009088.3-201ENST00000563605 GMIPQ9P107 970 aa16.5■□□□□ 0.23
AC009088.3-201ENST00000563605 RWDD2AQ9UIY3 292 aa16.5■□□□□ 0.23
AC009088.3-201ENST00000563605 WNT6Q9Y6F9 365 aa16.5■□□□□ 0.23
AC009088.3-201ENST00000563605 OTOL1A6NHN0 477 aaPredicted RBP16.49■□□□□ 0.23
AC009088.3-201ENST00000563605 FGFR1OPO95684 399 aaKnown RBP16.49■□□□□ 0.23
AC009088.3-201ENST00000563605 GNA14O95837 355 aa16.49■□□□□ 0.23
AC009088.3-201ENST00000563605 MBL2P11226 248 aaPredicted RBP16.49■□□□□ 0.23
AC009088.3-201ENST00000563605 ACO1P21399 889 aaKnown RBP16.49■□□□□ 0.23
AC009088.3-201ENST00000563605 CTHP32929 405 aa16.49■□□□□ 0.23
AC009088.3-201ENST00000563605 IFNAR2P48551 515 aa16.49■□□□□ 0.23
AC009088.3-201ENST00000563605 PDE6CP51160 858 aa16.49■□□□□ 0.23
AC009088.3-201ENST00000563605 CETN1Q12798 172 aa16.49■□□□□ 0.23
AC009088.3-201ENST00000563605 KCNH2Q12809 1159 aa16.49■□□□□ 0.23
AC009088.3-201ENST00000563605 FZD5Q13467 585 aa16.49■□□□□ 0.23
AC009088.3-201ENST00000563605 PON2Q15165 354 aa16.49■□□□□ 0.23
AC009088.3-201ENST00000563605 ZNF77Q15935 545 aa16.49■□□□□ 0.23
AC009088.3-201ENST00000563605 CLEC20AQ6ZU45 233 aa16.49■□□□□ 0.23
AC009088.3-201ENST00000563605 GPRIN1Q7Z2K8 1008 aa16.49■□□□□ 0.23
AC009088.3-201ENST00000563605 RALGPS2Q86X27 583 aaPredicted RBP16.49■□□□□ 0.23
AC009088.3-201ENST00000563605 TTC39CQ8N584 583 aa16.49■□□□□ 0.23
AC009088.3-201ENST00000563605 PDZD8Q8NEN9 1154 aa16.49■□□□□ 0.23
AC009088.3-201ENST00000563605 CLDN23Q96B33 292 aa16.49■□□□□ 0.23
AC009088.3-201ENST00000563605 CCSER2Q9H7U1 834 aa16.49■□□□□ 0.23
AC009088.3-201ENST00000563605 RBM12Q9NTZ6 932 aaKnown RBP16.49■□□□□ 0.23
AC009088.3-201ENST00000563605 ARHGAP26Q9UNA1 814 aa16.49■□□□□ 0.23
AC009088.3-201ENST00000563605 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.49■□□□□ 0.23
AC009088.3-201ENST00000563605 CPQQ9Y646 472 aa16.49■□□□□ 0.23
AC009088.3-201ENST00000563605 WDFY4Q6ZS81 3184 aa16.49■□□□□ 0.23
AC009088.3-201ENST00000563605 LEFTY2O00292 366 aa16.48■□□□□ 0.23
AC009088.3-201ENST00000563605 LAMTOR5O43504 91 aa16.48■□□□□ 0.23
AC009088.3-201ENST00000563605 AFPP02771 609 aaKnown RBP16.48■□□□□ 0.23
AC009088.3-201ENST00000563605 CCDC192P0DO97 292 aa16.48■□□□□ 0.23
AC009088.3-201ENST00000563605 CD19P15391 556 aa16.48■□□□□ 0.23
AC009088.3-201ENST00000563605 PGFP49763 221 aa16.48■□□□□ 0.23
AC009088.3-201ENST00000563605 ZXDBP98169 803 aa16.48■□□□□ 0.23
AC009088.3-201ENST00000563605 PDGFRLQ15198 375 aa16.48■□□□□ 0.23
AC009088.3-201ENST00000563605 TPD52L1Q16890 204 aaPredicted RBP16.48■□□□□ 0.23
AC009088.3-201ENST00000563605 HECTD3Q5T447 861 aa16.48■□□□□ 0.23
AC009088.3-201ENST00000563605 FOXR2Q6PJQ5 311 aa16.48■□□□□ 0.23
AC009088.3-201ENST00000563605 RRAGAQ7L523 313 aa16.48■□□□□ 0.23
AC009088.3-201ENST00000563605 TRIM59Q8IWR1 403 aa16.48■□□□□ 0.23
AC009088.3-201ENST00000563605 PPM1KQ8N3J5 372 aa16.48■□□□□ 0.23
AC009088.3-201ENST00000563605 MLKLQ8NB16 471 aa16.48■□□□□ 0.23
AC009088.3-201ENST00000563605 EHBP1Q8NDI1 1231 aa16.48■□□□□ 0.23
AC009088.3-201ENST00000563605 FAXDC2Q96IV6 333 aa16.48■□□□□ 0.23
AC009088.3-201ENST00000563605 NT5C1BQ96P26 610 aa16.48■□□□□ 0.23
AC009088.3-201ENST00000563605 MED15Q96RN5 788 aa16.48■□□□□ 0.23
AC009088.3-201ENST00000563605 DUSP16Q9BY84 665 aa16.48■□□□□ 0.23
AC009088.3-201ENST00000563605 NACA2Q9H009 215 aa16.48■□□□□ 0.23
AC009088.3-201ENST00000563605 COMMD8Q9NX08 183 aa16.48■□□□□ 0.23
AC009088.3-201ENST00000563605 IL37Q9NZH6 218 aa16.48■□□□□ 0.23
AC009088.3-201ENST00000563605 F5P12259 2224 aa16.47■□□□□ 0.23
AC009088.3-201ENST00000563605 PTPRDP23468 1912 aa16.47■□□□□ 0.23
AC009088.3-201ENST00000563605 TICRRQ7Z2Z1 1910 aa16.47■□□□□ 0.23
AC009088.3-201ENST00000563605 HHLA1C9JL84 531 aa16.47■□□□□ 0.23
AC009088.3-201ENST00000563605 COCHO43405 550 aa16.47■□□□□ 0.23
AC009088.3-201ENST00000563605 OAS1P00973 400 aaKnown RBP16.47■□□□□ 0.23
AC009088.3-201ENST00000563605 MRE11P49959 708 aa16.47■□□□□ 0.23
AC009088.3-201ENST00000563605 MLLT6P55198 1093 aaPredicted RBP16.47■□□□□ 0.23
AC009088.3-201ENST00000563605 YWHAEP62258 255 aaKnown RBP16.47■□□□□ 0.23
AC009088.3-201ENST00000563605 SLC7A9P82251 487 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms