RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 TTLL2Q9BWV7 592 aa13.83□□□□□ -0.2
SF3B3-202ENST00000562722 ZNF518BQ9C0D4 1074 aa13.83□□□□□ -0.2
SF3B3-202ENST00000562722 RNF38Q9H0F5 515 aa13.83□□□□□ -0.2
SF3B3-202ENST00000562722 DPEP3Q9H4B8 488 aa13.83□□□□□ -0.2
SF3B3-202ENST00000562722 KBTBD4Q9NVX7 518 aa13.83□□□□□ -0.2
SF3B3-202ENST00000562722 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.82□□□□□ -0.2
SF3B3-202ENST00000562722 C4orf47A7E2U8 309 aa13.82□□□□□ -0.2
SF3B3-202ENST00000562722 CLDN5O00501 218 aa13.82□□□□□ -0.2
SF3B3-202ENST00000562722 TM4SF5O14894 197 aa13.82□□□□□ -0.2
SF3B3-202ENST00000562722 KHNYNO15037 678 aaKnown RBP13.82□□□□□ -0.2
SF3B3-202ENST00000562722 TACC1O75410 805 aa13.82□□□□□ -0.2
SF3B3-202ENST00000562722 ADH1CP00326 375 aa13.82□□□□□ -0.2
SF3B3-202ENST00000562722 APODP05090 189 aa13.82□□□□□ -0.2
SF3B3-202ENST00000562722 PMLP29590 882 aa13.82□□□□□ -0.2
SF3B3-202ENST00000562722 DHPSP49366 369 aaPredicted RBP13.82□□□□□ -0.2
SF3B3-202ENST00000562722 CACNA2D1P54289 1103 aa13.82□□□□□ -0.2
SF3B3-202ENST00000562722 SLC7A9P82251 487 aa13.82□□□□□ -0.2
SF3B3-202ENST00000562722 KDSRQ06136 332 aa13.82□□□□□ -0.2
SF3B3-202ENST00000562722 BIRC3Q13489 604 aa13.82□□□□□ -0.2
SF3B3-202ENST00000562722 DHCR24Q15392 516 aa13.82□□□□□ -0.2
SF3B3-202ENST00000562722 E2F4Q16254 413 aa13.82□□□□□ -0.2
SF3B3-202ENST00000562722 PSAPL1Q6NUJ1 521 aa13.82□□□□□ -0.2
SF3B3-202ENST00000562722 DDX42Q86XP3 938 aaKnown RBP eCLIP13.82□□□□□ -0.2
SF3B3-202ENST00000562722 B3GALNT2Q8NCR0 500 aa13.82□□□□□ -0.2
SF3B3-202ENST00000562722 ZNF507Q8TCN5 953 aa13.82□□□□□ -0.2
SF3B3-202ENST00000562722 CNOT6LQ96LI5 555 aaKnown RBP13.82□□□□□ -0.2
SF3B3-202ENST00000562722 MED10Q9BTT4 135 aa13.82□□□□□ -0.2
SF3B3-202ENST00000562722 LSM14BQ9BX40 385 aaKnown RBP13.82□□□□□ -0.2
SF3B3-202ENST00000562722 BCCIPQ9P287 314 aaKnown RBP eCLIP13.82□□□□□ -0.2
SF3B3-202ENST00000562722 TFIP11Q9UBB9 837 aaKnown RBP13.82□□□□□ -0.2
SF3B3-202ENST00000562722 MMP17Q9ULZ9 603 aa13.82□□□□□ -0.2
SF3B3-202ENST00000562722 EPG5Q9HCE0 2579 aa13.82□□□□□ -0.2
SF3B3-202ENST00000562722 ATP8B3O60423 1300 aa13.82□□□□□ -0.2
SF3B3-202ENST00000562722 UBE4BO95155 1302 aa13.82□□□□□ -0.2
SF3B3-202ENST00000562722 MAP3K13O43283 966 aa13.81□□□□□ -0.2
SF3B3-202ENST00000562722 TGFB1I1O43294 461 aa13.81□□□□□ -0.2
SF3B3-202ENST00000562722 KLF8O95600 359 aaPredicted RBP13.81□□□□□ -0.2
SF3B3-202ENST00000562722 OAS1P00973 400 aaKnown RBP13.81□□□□□ -0.2
SF3B3-202ENST00000562722 ADH5P11766 374 aa13.81□□□□□ -0.2
SF3B3-202ENST00000562722 YWHAQP27348 245 aa13.81□□□□□ -0.2
SF3B3-202ENST00000562722 TIE1P35590 1138 aa13.81□□□□□ -0.2
SF3B3-202ENST00000562722 SLC6A11P48066 632 aa13.81□□□□□ -0.2
SF3B3-202ENST00000562722 NOVA1P51513 510 aaKnown RBP13.81□□□□□ -0.2
SF3B3-202ENST00000562722 MYL6P60660 151 aa13.81□□□□□ -0.2
SF3B3-202ENST00000562722 MRPS21P82921 87 aaKnown RBP13.81□□□□□ -0.2
SF3B3-202ENST00000562722 CRY1Q16526 586 aa13.81□□□□□ -0.2
SF3B3-202ENST00000562722 FOXD4L5Q5VV16 416 aaPredicted RBP13.81□□□□□ -0.2
SF3B3-202ENST00000562722 DAB2IPQ5VWQ8 1189 aa13.81□□□□□ -0.2
SF3B3-202ENST00000562722 PMS2CLQ68D20 193 aa13.81□□□□□ -0.2
SF3B3-202ENST00000562722 EPM2AIP1Q7L775 607 aaPredicted RBP13.81□□□□□ -0.2
SF3B3-202ENST00000562722 ADGRG2Q8IZP9 1017 aa13.81□□□□□ -0.2
SF3B3-202ENST00000562722 NUP93Q8N1F7 819 aa13.81□□□□□ -0.2
SF3B3-202ENST00000562722 PGBD3Q8N328 593 aa13.81□□□□□ -0.2
SF3B3-202ENST00000562722 ALLCQ8N6M5 410 aa13.81□□□□□ -0.2
SF3B3-202ENST00000562722 MDGA1Q8NFP4 955 aa13.81□□□□□ -0.2
SF3B3-202ENST00000562722 FOXD4L4Q8WXT5 416 aaPredicted RBP13.81□□□□□ -0.2
SF3B3-202ENST00000562722 FBXO32Q969P5 355 aa13.81□□□□□ -0.2
SF3B3-202ENST00000562722 SYAP1Q96A49 352 aaPredicted RBP13.81□□□□□ -0.2
SF3B3-202ENST00000562722 SPACA7Q96KW9 195 aa13.81□□□□□ -0.2
SF3B3-202ENST00000562722 PNKPQ96T60 521 aa13.81□□□□□ -0.2
SF3B3-202ENST00000562722 NACA2Q9H009 215 aa13.81□□□□□ -0.2
SF3B3-202ENST00000562722 BLZF1Q9H2G9 400 aa13.81□□□□□ -0.2
SF3B3-202ENST00000562722 POLMQ9NP87 494 aaPredicted RBP13.81□□□□□ -0.2
SF3B3-202ENST00000562722 ARHGEF4Q9NR80 690 aa13.81□□□□□ -0.2
SF3B3-202ENST00000562722 NME7Q9Y5B8 376 aa13.81□□□□□ -0.2
SF3B3-202ENST00000562722 SPAG17Q6Q759 2223 aa13.8□□□□□ -0.2
SF3B3-202ENST00000562722 LNP1A1A4G5 178 aa13.8□□□□□ -0.2
SF3B3-202ENST00000562722 ANTXRLA6NF34 631 aa13.8□□□□□ -0.2
SF3B3-202ENST00000562722 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.8□□□□□ -0.2
SF3B3-202ENST00000562722 EXOC3O60645 756 aa13.8□□□□□ -0.2
SF3B3-202ENST00000562722 CUTAO60888 179 aa13.8□□□□□ -0.2
SF3B3-202ENST00000562722 PPP6R2O75170 966 aa13.8□□□□□ -0.2
SF3B3-202ENST00000562722 RTN3O95197 1032 aaPredicted RBP13.8□□□□□ -0.2
SF3B3-202ENST00000562722 KAT7O95251 611 aa13.8□□□□□ -0.2
SF3B3-202ENST00000562722 OLFM2O95897 454 aa13.8□□□□□ -0.2
SF3B3-202ENST00000562722 FAM163BP0C2L3 166 aa13.8□□□□□ -0.2
SF3B3-202ENST00000562722 BCKDHBP21953 392 aa13.8□□□□□ -0.2
SF3B3-202ENST00000562722 ATICP31939 592 aa13.8□□□□□ -0.2
SF3B3-202ENST00000562722 SNRPFP62306 86 aaKnown RBP13.8□□□□□ -0.2
SF3B3-202ENST00000562722 GAB4Q2WGN9 574 aa13.8□□□□□ -0.2
SF3B3-202ENST00000562722 ZNF699Q32M78 642 aa13.8□□□□□ -0.2
SF3B3-202ENST00000562722 FOXD4L6Q3SYB3 417 aaPredicted RBP13.8□□□□□ -0.2
SF3B3-202ENST00000562722 FOXD4L3Q6VB84 417 aaPredicted RBP13.8□□□□□ -0.2
SF3B3-202ENST00000562722 SCARA5Q6ZMJ2 495 aa13.8□□□□□ -0.2
SF3B3-202ENST00000562722 UNC13DQ70J99 1090 aa13.8□□□□□ -0.2
SF3B3-202ENST00000562722 RASSF3Q86WH2 238 aa13.8□□□□□ -0.2
SF3B3-202ENST00000562722 TXNDC5Q8NBS9 432 aaKnown RBP13.8□□□□□ -0.2
SF3B3-202ENST00000562722 PDZD8Q8NEN9 1154 aa13.8□□□□□ -0.2
SF3B3-202ENST00000562722 WHAMMQ8TF30 809 aa13.8□□□□□ -0.2
SF3B3-202ENST00000562722 SCFD1Q8WVM8 642 aa13.8□□□□□ -0.2
SF3B3-202ENST00000562722 HMGB4Q8WW32 186 aa13.8□□□□□ -0.2
SF3B3-202ENST00000562722 PIGKQ92643 395 aa13.8□□□□□ -0.2
SF3B3-202ENST00000562722 C7orf25Q9BPX7 421 aa13.8□□□□□ -0.2
SF3B3-202ENST00000562722 B3GNT5Q9BYG0 378 aa13.8□□□□□ -0.2
SF3B3-202ENST00000562722 MAGEF1Q9HAY2 307 aa13.8□□□□□ -0.2
SF3B3-202ENST00000562722 ZDHHC4Q9NPG8 344 aa13.8□□□□□ -0.2
SF3B3-202ENST00000562722 TMEM9BQ9NQ34 198 aa13.8□□□□□ -0.2
SF3B3-202ENST00000562722 TBC1D14Q9P2M4 693 aa13.8□□□□□ -0.2
SF3B3-202ENST00000562722 SH3BP1Q9Y3L3 701 aa13.8□□□□□ -0.2
SF3B3-202ENST00000562722 K7ELQ4 463 aaPredicted RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 150.9 ms