RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 DNAJB11Q9UBS4 358 aa6.08□□□□□ -1.44
SYNE2-210ENST00000553455 IPO5O00410 1097 aaKnown RBP6.07□□□□□ -1.44
SYNE2-210ENST00000553455 DHHO43323 396 aa6.07□□□□□ -1.44
SYNE2-210ENST00000553455 COQ9O75208 318 aa6.07□□□□□ -1.44
SYNE2-210ENST00000553455 ERBB2P04626 1255 aa6.07□□□□□ -1.44
SYNE2-210ENST00000553455 PDHA1P08559 390 aa6.07□□□□□ -1.44
SYNE2-210ENST00000553455 ZNF20P17024 532 aa6.07□□□□□ -1.44
SYNE2-210ENST00000553455 NTSR1P30989 418 aa6.07□□□□□ -1.44
SYNE2-210ENST00000553455 UQCRC1P31930 480 aa6.07□□□□□ -1.44
SYNE2-210ENST00000553455 TIAL1Q01085 375 aaKnown RBP eCLIP6.07□□□□□ -1.44
SYNE2-210ENST00000553455 FZD5Q13467 585 aa6.07□□□□□ -1.44
SYNE2-210ENST00000553455 TP53BP2Q13625 1128 aa6.07□□□□□ -1.44
SYNE2-210ENST00000553455 CCNIQ14094 377 aa6.07□□□□□ -1.44
SYNE2-210ENST00000553455 DEPDC1Q5TB30 811 aa6.07□□□□□ -1.44
SYNE2-210ENST00000553455 GPR149Q86SP6 731 aa6.07□□□□□ -1.44
SYNE2-210ENST00000553455 SUGP1Q8IWZ8 645 aaKnown RBP6.07□□□□□ -1.44
SYNE2-210ENST00000553455 ABRAQ8N0Z2 381 aa6.07□□□□□ -1.44
SYNE2-210ENST00000553455 SSH3Q8TE77 659 aa6.07□□□□□ -1.44
SYNE2-210ENST00000553455 CACTINQ8WUQ7 758 aaKnown RBP6.07□□□□□ -1.44
SYNE2-210ENST00000553455 SLC25A43Q8WUT9 341 aaPredicted RBP6.07□□□□□ -1.44
SYNE2-210ENST00000553455 LPIN2Q92539 896 aa6.07□□□□□ -1.44
SYNE2-210ENST00000553455 ZDHHC12Q96GR4 267 aa6.07□□□□□ -1.44
SYNE2-210ENST00000553455 ZNF668Q96K58 619 aaPredicted RBP6.07□□□□□ -1.44
SYNE2-210ENST00000553455 ZBTB45Q96K62 511 aaPredicted RBP6.07□□□□□ -1.44
SYNE2-210ENST00000553455 C1QTNF3Q9BXJ4 246 aa6.07□□□□□ -1.44
SYNE2-210ENST00000553455 ACTRT3Q9BYD9 372 aa6.07□□□□□ -1.44
SYNE2-210ENST00000553455 CA14Q9ULX7 337 aa6.07□□□□□ -1.44
SYNE2-210ENST00000553455 FER1L4A9Z1Z3 1794 aa6.07□□□□□ -1.44
SYNE2-210ENST00000553455 CENPVL1A0A0U1RR11 272 aa6.06□□□□□ -1.44
SYNE2-210ENST00000553455 ZAR1LA6NP61 321 aa6.06□□□□□ -1.44
SYNE2-210ENST00000553455 M0R3H8 397 aa6.06□□□□□ -1.44
SYNE2-210ENST00000553455 PPM1DO15297 605 aa6.06□□□□□ -1.44
SYNE2-210ENST00000553455 GLP2RO95838 553 aa6.06□□□□□ -1.44
SYNE2-210ENST00000553455 C1SP09871 688 aa6.06□□□□□ -1.44
SYNE2-210ENST00000553455 DHRS4L1P0CG22 281 aa6.06□□□□□ -1.44
SYNE2-210ENST00000553455 SRGNP10124 158 aa6.06□□□□□ -1.44
SYNE2-210ENST00000553455 LAG3P18627 525 aa6.06□□□□□ -1.44
SYNE2-210ENST00000553455 HTR7P34969 479 aa6.06□□□□□ -1.44
SYNE2-210ENST00000553455 MAGEA10P43363 369 aaPredicted RBP6.06□□□□□ -1.44
SYNE2-210ENST00000553455 PGDP52209 483 aa6.06□□□□□ -1.44
SYNE2-210ENST00000553455 PNLIPRP1P54315 467 aa6.06□□□□□ -1.44
SYNE2-210ENST00000553455 CTSWP56202 376 aa6.06□□□□□ -1.44
SYNE2-210ENST00000553455 GPS1Q13098 491 aa6.06□□□□□ -1.44
SYNE2-210ENST00000553455 BIRC3Q13489 604 aa6.06□□□□□ -1.44
SYNE2-210ENST00000553455 ATP1A4Q13733 1029 aa6.06□□□□□ -1.44
SYNE2-210ENST00000553455 PRKG1Q13976 671 aa6.06□□□□□ -1.44
SYNE2-210ENST00000553455 SULT6B1Q6IMI4 303 aa6.06□□□□□ -1.44
SYNE2-210ENST00000553455 RNF207Q6ZRF8 634 aa6.06□□□□□ -1.44
SYNE2-210ENST00000553455 RHOUQ7L0Q8 258 aa6.06□□□□□ -1.44
SYNE2-210ENST00000553455 ZNF354CQ86Y25 554 aa6.06□□□□□ -1.44
SYNE2-210ENST00000553455 GATAD2AQ86YP4 633 aa6.06□□□□□ -1.44
SYNE2-210ENST00000553455 TPSD1Q9BZJ3 242 aa6.06□□□□□ -1.44
SYNE2-210ENST00000553455 TMOD4Q9NZQ9 345 aa6.06□□□□□ -1.44
SYNE2-210ENST00000553455 LPAR3Q9UBY5 353 aa6.06□□□□□ -1.44
SYNE2-210ENST00000553455 TSC22D4Q9Y3Q8 395 aa6.06□□□□□ -1.44
SYNE2-210ENST00000553455 HS3ST4Q9Y661 456 aa6.06□□□□□ -1.44
SYNE2-210ENST00000553455 NTSR2O95665 410 aa6.05□□□□□ -1.44
SYNE2-210ENST00000553455 CCT5P48643 541 aa6.05□□□□□ -1.44
SYNE2-210ENST00000553455 ATXN1P54253 815 aaKnown RBP6.05□□□□□ -1.44
SYNE2-210ENST00000553455 ADAM17P78536 824 aa6.05□□□□□ -1.44
SYNE2-210ENST00000553455 EFEMP1Q12805 493 aa6.05□□□□□ -1.44
SYNE2-210ENST00000553455 LY6KQ17RY6 165 aa6.05□□□□□ -1.44
SYNE2-210ENST00000553455 TRIM71Q2Q1W2 868 aaKnown RBP6.05□□□□□ -1.44
SYNE2-210ENST00000553455 GALNT15Q8N3T1 639 aa6.05□□□□□ -1.44
SYNE2-210ENST00000553455 MBD3L2Q8NHZ7 208 aaPredicted RBP6.05□□□□□ -1.44
SYNE2-210ENST00000553455 MYCBPAPQ8TBZ2 947 aa6.05□□□□□ -1.44
SYNE2-210ENST00000553455 OSCP1Q8WVF1 389 aa6.05□□□□□ -1.44
SYNE2-210ENST00000553455 ASB10Q8WXI3 467 aa6.05□□□□□ -1.44
SYNE2-210ENST00000553455 GCC1Q96CN9 775 aa6.05□□□□□ -1.44
SYNE2-210ENST00000553455 CDK5RAP1Q96SZ6 601 aaKnown RBP6.05□□□□□ -1.44
SYNE2-210ENST00000553455 C17orf80Q9BSJ5 609 aa6.05□□□□□ -1.44
SYNE2-210ENST00000553455 TP63Q9H3D4 680 aaPredicted RBP6.05□□□□□ -1.44
SYNE2-210ENST00000553455 MLXIPQ9HAP2 919 aa6.05□□□□□ -1.44
SYNE2-210ENST00000553455 ITM2CQ9NQX7 267 aa6.05□□□□□ -1.44
SYNE2-210ENST00000553455 RIMKLBQ9ULI2 386 aa6.05□□□□□ -1.44
SYNE2-210ENST00000553455 FZD1Q9UP38 647 aa6.05□□□□□ -1.44
SYNE2-210ENST00000553455 PROM1O43490 865 aa6.04□□□□□ -1.44
SYNE2-210ENST00000553455 FOXD2O60548 495 aaPredicted RBP6.04□□□□□ -1.44
SYNE2-210ENST00000553455 CBFA2T3O75081 653 aa6.04□□□□□ -1.44
SYNE2-210ENST00000553455 USP1O94782 785 aa6.04□□□□□ -1.44
SYNE2-210ENST00000553455 VNN1O95497 513 aa6.04□□□□□ -1.44
SYNE2-210ENST00000553455 LMNAP02545 664 aaKnown RBP6.04□□□□□ -1.44
SYNE2-210ENST00000553455 RHOP08100 348 aa6.04□□□□□ -1.44
SYNE2-210ENST00000553455 GYS1P13807 737 aa6.04□□□□□ -1.44
SYNE2-210ENST00000553455 HSD3B1P14060 373 aa6.04□□□□□ -1.44
SYNE2-210ENST00000553455 PRKAR1BP31321 381 aa6.04□□□□□ -1.44
SYNE2-210ENST00000553455 GUCY1B3Q02153 619 aa6.04□□□□□ -1.44
SYNE2-210ENST00000553455 PPFIA1Q13136 1202 aa6.04□□□□□ -1.44
SYNE2-210ENST00000553455 SF3B3Q15393 1217 aaKnown RBP6.04□□□□□ -1.44
SYNE2-210ENST00000553455 NRN1LQ496H8 165 aa6.04□□□□□ -1.44
SYNE2-210ENST00000553455 FBLN7Q53RD9 439 aa6.04□□□□□ -1.44
SYNE2-210ENST00000553455 ERICH6BQ5W0A0 696 aa6.04□□□□□ -1.44
SYNE2-210ENST00000553455 SLC9A4Q6AI14 798 aa6.04□□□□□ -1.44
SYNE2-210ENST00000553455 MAVSQ7Z434 540 aa6.04□□□□□ -1.44
SYNE2-210ENST00000553455 DTX2Q86UW9 622 aa6.04□□□□□ -1.44
SYNE2-210ENST00000553455 ARHGEF19Q8IW93 802 aa6.04□□□□□ -1.44
SYNE2-210ENST00000553455 IZUMO1Q8IYV9 350 aa6.04□□□□□ -1.44
SYNE2-210ENST00000553455 LNX2Q8N448 690 aa6.04□□□□□ -1.44
SYNE2-210ENST00000553455 B3GALNT2Q8NCR0 500 aa6.04□□□□□ -1.44
SYNE2-210ENST00000553455 OTUD7AQ8TE49 926 aaPredicted RBP6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 124.5 ms