RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 BDNFP23560 247 aa7.34□□□□□ -1.23
PRPF40B-214ENST00000551320 WEE1P30291 646 aa7.34□□□□□ -1.23
PRPF40B-214ENST00000551320 CDC25CP30307 473 aa7.34□□□□□ -1.23
PRPF40B-214ENST00000551320 GBP1P32455 592 aa7.34□□□□□ -1.23
PRPF40B-214ENST00000551320 HOXD13P35453 343 aa7.34□□□□□ -1.23
PRPF40B-214ENST00000551320 WASP42768 502 aa7.34□□□□□ -1.23
PRPF40B-214ENST00000551320 TUFMP49411 452 aaKnown RBP7.34□□□□□ -1.23
PRPF40B-214ENST00000551320 PGFP49763 221 aa7.34□□□□□ -1.23
PRPF40B-214ENST00000551320 DGKEP52429 567 aa7.34□□□□□ -1.23
PRPF40B-214ENST00000551320 CLDN10P78369 228 aa7.34□□□□□ -1.23
PRPF40B-214ENST00000551320 CREB5Q02930 508 aa7.34□□□□□ -1.23
PRPF40B-214ENST00000551320 GRSF1Q12849 480 aaKnown RBP eCLIP7.34□□□□□ -1.23
PRPF40B-214ENST00000551320 ORC1Q13415 861 aa7.34□□□□□ -1.23
PRPF40B-214ENST00000551320 PPP2R5DQ14738 602 aa7.34□□□□□ -1.23
PRPF40B-214ENST00000551320 MTF1Q14872 753 aa7.34□□□□□ -1.23
PRPF40B-214ENST00000551320 PTPAQ15257 358 aa7.34□□□□□ -1.23
PRPF40B-214ENST00000551320 SOWAHAQ2M3V2 549 aa7.34□□□□□ -1.23
PRPF40B-214ENST00000551320 UAP1L1Q3KQV9 507 aa7.34□□□□□ -1.23
PRPF40B-214ENST00000551320 PLK5Q496M5 336 aa7.34□□□□□ -1.23
PRPF40B-214ENST00000551320 CRTC2Q53ET0 693 aaPredicted RBP7.34□□□□□ -1.23
PRPF40B-214ENST00000551320 DGKKQ5KSL6 1271 aa7.34□□□□□ -1.23
PRPF40B-214ENST00000551320 IL31Q6EBC2 164 aa7.34□□□□□ -1.23
PRPF40B-214ENST00000551320 ANO7Q6IWH7 933 aa7.34□□□□□ -1.23
PRPF40B-214ENST00000551320 ITIH5Q86UX2 942 aa7.34□□□□□ -1.23
PRPF40B-214ENST00000551320 MON1AQ86VX9 555 aa7.34□□□□□ -1.23
PRPF40B-214ENST00000551320 C12orf40Q86WS4 652 aa7.34□□□□□ -1.23
PRPF40B-214ENST00000551320 CBWD2Q8IUF1 395 aa7.34□□□□□ -1.23
PRPF40B-214ENST00000551320 THEM5Q8N1Q8 247 aa7.34□□□□□ -1.23
PRPF40B-214ENST00000551320 C12orf50Q8NA57 414 aaPredicted RBP7.34□□□□□ -1.23
PRPF40B-214ENST00000551320 LEMD2Q8NC56 503 aa7.34□□□□□ -1.23
PRPF40B-214ENST00000551320 OR2I1PQ8NGU4 316 aa7.34□□□□□ -1.23
PRPF40B-214ENST00000551320 GAB3Q8WWW8 586 aa7.34□□□□□ -1.23
PRPF40B-214ENST00000551320 GCNAQ96QF7 691 aa7.34□□□□□ -1.23
PRPF40B-214ENST00000551320 PKMYT1Q99640 499 aa7.34□□□□□ -1.23
PRPF40B-214ENST00000551320 P2RY13Q9BPV8 354 aa7.34□□□□□ -1.23
PRPF40B-214ENST00000551320 MRPL45Q9BRJ2 306 aaKnown RBP7.34□□□□□ -1.23
PRPF40B-214ENST00000551320 TIPINQ9BVW5 301 aa7.34□□□□□ -1.23
PRPF40B-214ENST00000551320 TRIM9Q9C026 710 aa7.34□□□□□ -1.23
PRPF40B-214ENST00000551320 GPR88Q9GZN0 384 aa7.34□□□□□ -1.23
PRPF40B-214ENST00000551320 RNF38Q9H0F5 515 aa7.34□□□□□ -1.23
PRPF40B-214ENST00000551320 DPEP3Q9H4B8 488 aa7.34□□□□□ -1.23
PRPF40B-214ENST00000551320 ECT2Q9H8V3 914 aa7.34□□□□□ -1.23
PRPF40B-214ENST00000551320 CRTAC1Q9NQ79 661 aa7.34□□□□□ -1.23
PRPF40B-214ENST00000551320 FBXO2Q9UK22 296 aaPredicted RBP7.34□□□□□ -1.23
PRPF40B-214ENST00000551320 ODF2LQ9ULJ1 636 aa7.34□□□□□ -1.23
PRPF40B-214ENST00000551320 ASB3Q9Y575 518 aa7.34□□□□□ -1.23
PRPF40B-214ENST00000551320 OBSL1O75147 1896 aa7.34□□□□□ -1.23
PRPF40B-214ENST00000551320 NUP210Q8TEM1 1887 aaPredicted RBP7.34□□□□□ -1.23
PRPF40B-214ENST00000551320 ATRXP46100 2492 aa7.34□□□□□ -1.24
PRPF40B-214ENST00000551320 ANKRD11Q6UB99 2663 aaPredicted RBP7.34□□□□□ -1.24
PRPF40B-214ENST00000551320 TRDMT1O14717 391 aaKnown RBP7.33□□□□□ -1.24
PRPF40B-214ENST00000551320 TM4SF5O14894 197 aa7.33□□□□□ -1.24
PRPF40B-214ENST00000551320 CLIC2O15247 247 aa7.33□□□□□ -1.24
PRPF40B-214ENST00000551320 XPOTO43592 962 aaKnown RBP7.33□□□□□ -1.24
PRPF40B-214ENST00000551320 EPN2O95208 641 aa7.33□□□□□ -1.24
PRPF40B-214ENST00000551320 MPLP40238 635 aa7.33□□□□□ -1.24
PRPF40B-214ENST00000551320 OPRD1P41143 372 aa7.33□□□□□ -1.24
PRPF40B-214ENST00000551320 RAP1GAPP47736 663 aa7.33□□□□□ -1.24
PRPF40B-214ENST00000551320 WDR4P57081 412 aaKnown RBP7.33□□□□□ -1.24
PRPF40B-214ENST00000551320 TSPY1Q01534 308 aa7.33□□□□□ -1.24
PRPF40B-214ENST00000551320 CYP27A1Q02318 531 aa7.33□□□□□ -1.24
PRPF40B-214ENST00000551320 KDSRQ06136 332 aa7.33□□□□□ -1.24
PRPF40B-214ENST00000551320 DMC1Q14565 340 aa7.33□□□□□ -1.24
PRPF40B-214ENST00000551320 ZNF77Q15935 545 aa7.33□□□□□ -1.24
PRPF40B-214ENST00000551320 GAB4Q2WGN9 574 aa7.33□□□□□ -1.24
PRPF40B-214ENST00000551320 MDH1BQ5I0G3 518 aa7.33□□□□□ -1.24
PRPF40B-214ENST00000551320 ARL6IP4Q66PJ3 421 aaKnown RBP7.33□□□□□ -1.24
PRPF40B-214ENST00000551320 CC2D1AQ6P1N0 951 aaPredicted RBP7.33□□□□□ -1.24
PRPF40B-214ENST00000551320 CACNA2D4Q7Z3S7 1137 aa7.33□□□□□ -1.24
PRPF40B-214ENST00000551320 SPATA2LQ8IUW3 424 aaPredicted RBP7.33□□□□□ -1.24
PRPF40B-214ENST00000551320 ADGRF2Q8IZF7 708 aa7.33□□□□□ -1.24
PRPF40B-214ENST00000551320 SYCP3Q8IZU3 236 aa7.33□□□□□ -1.24
PRPF40B-214ENST00000551320 GPR161Q8N6U8 529 aaKnown RBP7.33□□□□□ -1.24
PRPF40B-214ENST00000551320 NAT16Q8N8M0 369 aa7.33□□□□□ -1.24
PRPF40B-214ENST00000551320 KBTBD7Q8WVZ9 684 aa7.33□□□□□ -1.24
PRPF40B-214ENST00000551320 MRPS31Q92665 395 aaKnown RBP7.33□□□□□ -1.24
PRPF40B-214ENST00000551320 HPS1Q92902 700 aa7.33□□□□□ -1.24
PRPF40B-214ENST00000551320 MYLPFQ96A32 169 aa7.33□□□□□ -1.24
PRPF40B-214ENST00000551320 E2F7Q96AV8 911 aa7.33□□□□□ -1.24
PRPF40B-214ENST00000551320 ITPKCQ96DU7 683 aa7.33□□□□□ -1.24
PRPF40B-214ENST00000551320 STRA6Q9BX79 667 aa7.33□□□□□ -1.24
PRPF40B-214ENST00000551320 CD93Q9NPY3 652 aa7.33□□□□□ -1.24
PRPF40B-214ENST00000551320 THG1LQ9NWX6 298 aaKnown RBP7.33□□□□□ -1.24
PRPF40B-214ENST00000551320 RBAKQ9NYW8 714 aaPredicted RBP7.33□□□□□ -1.24
PRPF40B-214ENST00000551320 MAFFQ9ULX9 164 aa7.33□□□□□ -1.24
PRPF40B-214ENST00000551320 PCDHGA11Q9Y5H2 935 aa7.33□□□□□ -1.24
PRPF40B-214ENST00000551320 STYXL1Q9Y6J8 313 aa7.33□□□□□ -1.24
PRPF40B-214ENST00000551320 LAMA5O15230 3695 aa7.33□□□□□ -1.24
PRPF40B-214ENST00000551320 DENND4CQ5VZ89 1909 aa7.33□□□□□ -1.24
PRPF40B-214ENST00000551320 PKD1L2Q7Z442 2459 aa7.33□□□□□ -1.24
PRPF40B-214ENST00000551320 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.32□□□□□ -1.24
PRPF40B-214ENST00000551320 K7EQS6 105 aa7.32□□□□□ -1.24
PRPF40B-214ENST00000551320 LEFTY2O00292 366 aa7.32□□□□□ -1.24
PRPF40B-214ENST00000551320 HUS1O60921 280 aa7.32□□□□□ -1.24
PRPF40B-214ENST00000551320 KCNK5O95279 499 aa7.32□□□□□ -1.24
PRPF40B-214ENST00000551320 PAPSS2O95340 614 aaPredicted RBP7.32□□□□□ -1.24
PRPF40B-214ENST00000551320 ZIC2O95409 532 aaPredicted RBP7.32□□□□□ -1.24
PRPF40B-214ENST00000551320 CST3P01034 146 aaPredicted RBP7.32□□□□□ -1.24
PRPF40B-214ENST00000551320 ZNF806P0C7X5 589 aa7.32□□□□□ -1.24
PRPF40B-214ENST00000551320 IRF1P10914 325 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms