RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 PUM1Q14671 1186 aaKnown RBP eCLIP9.94□□□□□ -0.821e-6■□□□□ 9.4
YBX3-218ENST00000546298 EML3Q32P44 896 aa9.94□□□□□ -0.82
YBX3-218ENST00000546298 EDRF1Q3B7T1 1238 aa9.94□□□□□ -0.82
YBX3-218ENST00000546298 HEATR6Q6AI08 1181 aaKnown RBP9.94□□□□□ -0.82
YBX3-218ENST00000546298 LAIR1Q6GTX8 287 aa9.94□□□□□ -0.82
YBX3-218ENST00000546298 SCARA5Q6ZMJ2 495 aa9.94□□□□□ -0.82
YBX3-218ENST00000546298 PRR23BQ6ZRT6 265 aa9.94□□□□□ -0.82
YBX3-218ENST00000546298 CEP68Q76N32 757 aa9.94□□□□□ -0.82
YBX3-218ENST00000546298 ACOT1Q86TX2 421 aa9.94□□□□□ -0.82
YBX3-218ENST00000546298 FAM35AQ86V20 835 aa9.94□□□□□ -0.82
YBX3-218ENST00000546298 FAM186BQ8IYM0 893 aa9.94□□□□□ -0.82
YBX3-218ENST00000546298 CRYBG2Q8N1P7 616 aa9.94□□□□□ -0.82
YBX3-218ENST00000546298 RIN3Q8TB24 985 aa9.94□□□□□ -0.82
YBX3-218ENST00000546298 CD101Q93033 1021 aa9.94□□□□□ -0.82
YBX3-218ENST00000546298 FBXO32Q969P5 355 aa9.94□□□□□ -0.82
YBX3-218ENST00000546298 ACDQ96AP0 544 aa9.94□□□□□ -0.82
YBX3-218ENST00000546298 CHAMP1Q96JM3 812 aa9.94□□□□□ -0.82
YBX3-218ENST00000546298 GTPBP4Q9BZE4 634 aaKnown RBP9.94□□□□□ -0.82
YBX3-218ENST00000546298 LINC00597Q9H2U6 94 aa9.94□□□□□ -0.82
YBX3-218ENST00000546298 CYP3A43Q9HB55 503 aa9.94□□□□□ -0.82
YBX3-218ENST00000546298 RMND1Q9NWS8 449 aa9.94□□□□□ -0.82
YBX3-218ENST00000546298 TBC1D14Q9P2M4 693 aa9.94□□□□□ -0.82
YBX3-218ENST00000546298 MAPK8IP1Q9UQF2 711 aa9.94□□□□□ -0.82
YBX3-218ENST00000546298 NME7Q9Y5B8 376 aa9.94□□□□□ -0.82
YBX3-218ENST00000546298 MYH15Q9Y2K3 1946 aa9.94□□□□□ -0.82
YBX3-218ENST00000546298 EP300Q09472 2414 aaPredicted RBP9.93□□□□□ -0.82
YBX3-218ENST00000546298 CETN3O15182 167 aa9.93□□□□□ -0.82
YBX3-218ENST00000546298 AP1G2O75843 785 aa9.93□□□□□ -0.82
YBX3-218ENST00000546298 AKAP3O75969 853 aa9.93□□□□□ -0.82
YBX3-218ENST00000546298 SMC2O95347 1197 aa9.93□□□□□ -0.82
YBX3-218ENST00000546298 OLFM2O95897 454 aa9.93□□□□□ -0.82
YBX3-218ENST00000546298 OAS1P00973 400 aaKnown RBP9.93□□□□□ -0.82
YBX3-218ENST00000546298 EGFP01133 1207 aa9.93□□□□□ -0.82
YBX3-218ENST00000546298 HLA-DRAP01903 254 aa9.93□□□□□ -0.82
YBX3-218ENST00000546298 RETP07949 1114 aa9.93□□□□□ -0.82
YBX3-218ENST00000546298 PRR29P0C7W0 189 aa9.93□□□□□ -0.82
YBX3-218ENST00000546298 MBL2P11226 248 aaPredicted RBP9.93□□□□□ -0.82
YBX3-218ENST00000546298 GTF2H1P32780 548 aa9.93□□□□□ -0.82
YBX3-218ENST00000546298 RAP1GAPP47736 663 aa9.93□□□□□ -0.82
YBX3-218ENST00000546298 GCLMP48507 274 aa9.93□□□□□ -0.82
YBX3-218ENST00000546298 NDST1P52848 882 aa9.93□□□□□ -0.82
YBX3-218ENST00000546298 WDR44Q5JSH3 913 aa9.93□□□□□ -0.82
YBX3-218ENST00000546298 HECTD3Q5T447 861 aa9.93□□□□□ -0.82
YBX3-218ENST00000546298 WDR5BQ86VZ2 330 aa9.93□□□□□ -0.82
YBX3-218ENST00000546298 TTC39CQ8N584 583 aa9.93□□□□□ -0.82
YBX3-218ENST00000546298 CAMKK1Q8N5S9 505 aa9.93□□□□□ -0.82
YBX3-218ENST00000546298 KCNK16Q96T55 309 aa9.93□□□□□ -0.82
YBX3-218ENST00000546298 RNF38Q9H0F5 515 aa9.93□□□□□ -0.82
YBX3-218ENST00000546298 GOLPH3LQ9H4A5 285 aa9.93□□□□□ -0.82
YBX3-218ENST00000546298 FBXO44Q9H4M3 255 aa9.93□□□□□ -0.82
YBX3-218ENST00000546298 HOOK1Q9UJC3 728 aaKnown RBP9.93□□□□□ -0.82
YBX3-218ENST00000546298 USP18Q9UMW8 372 aa9.93□□□□□ -0.82
YBX3-218ENST00000546298 CPQQ9Y646 472 aa9.93□□□□□ -0.82
YBX3-218ENST00000546298 GPR179Q6PRD1 2367 aa9.93□□□□□ -0.82
YBX3-218ENST00000546298 E2F8A0AVK6 867 aa9.92□□□□□ -0.82
YBX3-218ENST00000546298 HRO43593 1189 aa9.92□□□□□ -0.82
YBX3-218ENST00000546298 FOXD2O60548 495 aaPredicted RBP9.92□□□□□ -0.82
YBX3-218ENST00000546298 LRP3O75074 770 aa9.92□□□□□ -0.82
YBX3-218ENST00000546298 RNF40O75150 1001 aa9.92□□□□□ -0.82
YBX3-218ENST00000546298 ADH1CP00326 375 aa9.92□□□□□ -0.82
YBX3-218ENST00000546298 FAM200BP0CF97 657 aa9.92□□□□□ -0.82
YBX3-218ENST00000546298 EPB41P11171 864 aaKnown RBP9.92□□□□□ -0.82
YBX3-218ENST00000546298 ASPAP45381 313 aa9.92□□□□□ -0.82
YBX3-218ENST00000546298 TUBP50607 506 aa9.92□□□□□ -0.82
YBX3-218ENST00000546298 SLC5A3P53794 718 aa9.92□□□□□ -0.82
YBX3-218ENST00000546298 CACNA2D1P54289 1103 aa9.92□□□□□ -0.82
YBX3-218ENST00000546298 LPAL2Q16609 132 aa9.92□□□□□ -0.82
YBX3-218ENST00000546298 SNX30Q5VWJ9 437 aa9.92□□□□□ -0.82
YBX3-218ENST00000546298 KRT39Q6A163 491 aa9.92□□□□□ -0.82
YBX3-218ENST00000546298 PAQR9Q6ZVX9 377 aa9.92□□□□□ -0.82
YBX3-218ENST00000546298 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.92□□□□□ -0.82
YBX3-218ENST00000546298 ADGRG2Q8IZP9 1017 aa9.92□□□□□ -0.82
YBX3-218ENST00000546298 FUKQ8N0W3 1084 aa9.92□□□□□ -0.82
YBX3-218ENST00000546298 SLC2A14Q8TDB8 520 aa9.92□□□□□ -0.82
YBX3-218ENST00000546298 RMDN1Q96DB5 314 aa9.92□□□□□ -0.82
YBX3-218ENST00000546298 OTUB2Q96DC9 234 aa9.92□□□□□ -0.82
YBX3-218ENST00000546298 CHFRQ96EP1 664 aa9.92□□□□□ -0.82
YBX3-218ENST00000546298 FAXDC2Q96IV6 333 aa9.92□□□□□ -0.82
YBX3-218ENST00000546298 GSDMAQ96QA5 445 aa9.92□□□□□ -0.82
YBX3-218ENST00000546298 HNRNPABQ99729 332 aaKnown RBP9.92□□□□□ -0.82
YBX3-218ENST00000546298 TSG101Q99816 390 aa9.92□□□□□ -0.82
YBX3-218ENST00000546298 NT5C1AQ9BXI3 368 aa9.92□□□□□ -0.82
YBX3-218ENST00000546298 NIF3L1Q9GZT8 377 aa9.92□□□□□ -0.82
YBX3-218ENST00000546298 NACA2Q9H009 215 aa9.92□□□□□ -0.82
YBX3-218ENST00000546298 SDCBP2Q9H190 292 aa9.92□□□□□ -0.82
YBX3-218ENST00000546298 GDPD2Q9HCC8 539 aa9.92□□□□□ -0.82
YBX3-218ENST00000546298 FBRSL1Q9HCM7 1045 aaKnown RBP9.92□□□□□ -0.82
YBX3-218ENST00000546298 TMEM8AQ9HCN3 771 aa9.92□□□□□ -0.82
YBX3-218ENST00000546298 KRT82Q9NSB4 513 aa9.92□□□□□ -0.82
YBX3-218ENST00000546298 SMPD4Q9NXE4 827 aa9.92□□□□□ -0.82
YBX3-218ENST00000546298 IL37Q9NZH6 218 aa9.92□□□□□ -0.82
YBX3-218ENST00000546298 CFAP97Q9P2B7 532 aa9.92□□□□□ -0.82
YBX3-218ENST00000546298 CHORDC1Q9UHD1 332 aaPredicted RBP9.92□□□□□ -0.82
YBX3-218ENST00000546298 SH3BP1Q9Y3L3 701 aa9.92□□□□□ -0.82
YBX3-218ENST00000546298 COL4A3Q01955 1670 aa9.92□□□□□ -0.82
YBX3-218ENST00000546298 GVINP1Q7Z2Y8 2422 aa9.92□□□□□ -0.82
YBX3-218ENST00000546298 FAM92AA1XBS5 289 aa9.91□□□□□ -0.82
YBX3-218ENST00000546298 TNFRSF10BO14763 440 aa9.91□□□□□ -0.82
YBX3-218ENST00000546298 TRIM49P0CI25 452 aa9.91□□□□□ -0.82
YBX3-218ENST00000546298 TRIM49CP0CI26 452 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms