RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.34□□□□□ -0.753e-10■■■■■ 130.4
TNFRSF1A-214ENST00000543048 GKN1Q9NS71 199 aa10.34□□□□□ -0.75
TNFRSF1A-214ENST00000543048 RAB20Q9NX57 234 aa10.34□□□□□ -0.75
TNFRSF1A-214ENST00000543048 ARMCX3Q9UH62 379 aaPredicted RBP10.34□□□□□ -0.75
TNFRSF1A-214ENST00000543048 PATJQ8NI35 1801 aa10.34□□□□□ -0.75
TNFRSF1A-214ENST00000543048 COL4A3Q01955 1670 aa10.34□□□□□ -0.75
TNFRSF1A-214ENST00000543048 NCANO14594 1321 aa10.33□□□□□ -0.76
TNFRSF1A-214ENST00000543048 BICDL2A1A5D9 508 aa10.33□□□□□ -0.76
TNFRSF1A-214ENST00000543048 TRIM49BA6NDI0 452 aa10.33□□□□□ -0.76
TNFRSF1A-214ENST00000543048 SHISA7A6NL88 538 aa10.33□□□□□ -0.76
TNFRSF1A-214ENST00000543048 ARNTLO00327 626 aa10.33□□□□□ -0.76
TNFRSF1A-214ENST00000543048 BIN1O00499 593 aa10.33□□□□□ -0.76
TNFRSF1A-214ENST00000543048 MAP3K7O43318 606 aa10.33□□□□□ -0.76
TNFRSF1A-214ENST00000543048 LRRN2O75325 713 aa10.33□□□□□ -0.76
TNFRSF1A-214ENST00000543048 RTN3O95197 1032 aaPredicted RBP10.33□□□□□ -0.76
TNFRSF1A-214ENST00000543048 PRAMEF12O95522 483 aa10.33□□□□□ -0.76
TNFRSF1A-214ENST00000543048 BMP6P22004 513 aa10.33□□□□□ -0.76
TNFRSF1A-214ENST00000543048 YWHAQP27348 245 aa10.33□□□□□ -0.76
TNFRSF1A-214ENST00000543048 MXI1P50539 228 aa10.33□□□□□ -0.76
TNFRSF1A-214ENST00000543048 PDE6CP51160 858 aa10.33□□□□□ -0.76
TNFRSF1A-214ENST00000543048 KPNA1P52294 538 aaPredicted RBP10.33□□□□□ -0.76
TNFRSF1A-214ENST00000543048 CACNA2D1P54289 1103 aa10.33□□□□□ -0.76
TNFRSF1A-214ENST00000543048 USP46P62068 366 aa10.33□□□□□ -0.76
TNFRSF1A-214ENST00000543048 INCA1Q0VD86 236 aa10.33□□□□□ -0.76
TNFRSF1A-214ENST00000543048 FZD5Q13467 585 aa10.33□□□□□ -0.76
TNFRSF1A-214ENST00000543048 ANGPT1Q15389 498 aa10.33□□□□□ -0.76
TNFRSF1A-214ENST00000543048 WDR44Q5JSH3 913 aa10.33□□□□□ -0.76
TNFRSF1A-214ENST00000543048 TCERG1LQ5VWI1 586 aa10.33□□□□□ -0.76
TNFRSF1A-214ENST00000543048 C1orf228Q6PIY5 440 aa10.33□□□□□ -0.76
TNFRSF1A-214ENST00000543048 FOXR2Q6PJQ5 311 aa10.33□□□□□ -0.76
TNFRSF1A-214ENST00000543048 CLEC17AQ6ZS10 378 aa10.33□□□□□ -0.76
TNFRSF1A-214ENST00000543048 FRMD5Q7Z6J6 570 aa10.33□□□□□ -0.76
TNFRSF1A-214ENST00000543048 ALYREFQ86V81 257 aaKnown RBP10.33□□□□□ -0.76
TNFRSF1A-214ENST00000543048 C1orf210Q8IVY1 113 aa10.33□□□□□ -0.76
TNFRSF1A-214ENST00000543048 FUKQ8N0W3 1084 aa10.33□□□□□ -0.76
TNFRSF1A-214ENST00000543048 TTC39CQ8N584 583 aa10.33□□□□□ -0.76
TNFRSF1A-214ENST00000543048 NELFBQ8WX92 580 aa10.33□□□□□ -0.76
TNFRSF1A-214ENST00000543048 FAM3CQ92520 227 aa10.33□□□□□ -0.76
TNFRSF1A-214ENST00000543048 SEMA4DQ92854 862 aa10.33□□□□□ -0.76
TNFRSF1A-214ENST00000543048 SMARCD1Q96GM5 515 aa10.33□□□□□ -0.76
TNFRSF1A-214ENST00000543048 MSANTD3Q96H12 275 aa10.33□□□□□ -0.76
TNFRSF1A-214ENST00000543048 ZFYVE19Q96K21 471 aa10.33□□□□□ -0.76
TNFRSF1A-214ENST00000543048 KCNK16Q96T55 309 aa10.33□□□□□ -0.76
TNFRSF1A-214ENST00000543048 NT5C1AQ9BXI3 368 aa10.33□□□□□ -0.76
TNFRSF1A-214ENST00000543048 KIF9Q9HAQ2 790 aa10.33□□□□□ -0.76
TNFRSF1A-214ENST00000543048 TRPC7Q9HCX4 862 aa10.33□□□□□ -0.76
TNFRSF1A-214ENST00000543048 TMEM30AQ9NV96 361 aa10.33□□□□□ -0.76
TNFRSF1A-214ENST00000543048 COMMD8Q9NX08 183 aa10.33□□□□□ -0.76
TNFRSF1A-214ENST00000543048 GCNT4Q9P109 453 aa10.33□□□□□ -0.76
TNFRSF1A-214ENST00000543048 CCL26Q9Y258 94 aa10.33□□□□□ -0.76
TNFRSF1A-214ENST00000543048 PIAS3Q9Y6X2 628 aa10.33□□□□□ -0.76
TNFRSF1A-214ENST00000543048 ZFHX2Q9C0A1 2572 aaPredicted RBP10.33□□□□□ -0.76
TNFRSF1A-214ENST00000543048 MYO18AQ92614 2054 aaKnown RBP10.32□□□□□ -0.76
TNFRSF1A-214ENST00000543048 MYO16Q9Y6X6 1858 aa10.32□□□□□ -0.76
TNFRSF1A-214ENST00000543048 ZNF840PA6NDX5 716 aa10.32□□□□□ -0.76
TNFRSF1A-214ENST00000543048 TADA3O75528 432 aa10.32□□□□□ -0.76
TNFRSF1A-214ENST00000543048 AP1G2O75843 785 aa10.32□□□□□ -0.76
TNFRSF1A-214ENST00000543048 TARSP26639 723 aaKnown RBP10.32□□□□□ -0.76
TNFRSF1A-214ENST00000543048 RPS9P46781 194 aaKnown RBP10.32□□□□□ -0.76
TNFRSF1A-214ENST00000543048 TAF10Q12962 218 aa10.32□□□□□ -0.76
TNFRSF1A-214ENST00000543048 MMRN1Q13201 1228 aa10.32□□□□□ -0.76
TNFRSF1A-214ENST00000543048 ORC1Q13415 861 aa10.32□□□□□ -0.76
TNFRSF1A-214ENST00000543048 ITPRIPL2Q3MIP1 535 aa10.32□□□□□ -0.76
TNFRSF1A-214ENST00000543048 KLHL10Q6JEL2 608 aa10.32□□□□□ -0.76
TNFRSF1A-214ENST00000543048 CC2D1AQ6P1N0 951 aaPredicted RBP10.32□□□□□ -0.76
TNFRSF1A-214ENST00000543048 FAM35AQ86V20 835 aa10.32□□□□□ -0.76
TNFRSF1A-214ENST00000543048 RALGPS2Q86X27 583 aaPredicted RBP10.32□□□□□ -0.76
TNFRSF1A-214ENST00000543048 ARL14EPQ8N8R7 260 aaPredicted RBP10.32□□□□□ -0.76
TNFRSF1A-214ENST00000543048 C12orf29Q8N999 325 aa10.32□□□□□ -0.76
TNFRSF1A-214ENST00000543048 TRIML1Q8N9V2 468 aa10.32□□□□□ -0.76
TNFRSF1A-214ENST00000543048 SLC2A14Q8TDB8 520 aa10.32□□□□□ -0.76
TNFRSF1A-214ENST00000543048 TATDN2Q93075 761 aa10.32□□□□□ -0.76
TNFRSF1A-214ENST00000543048 CYFIP2Q96F07 1278 aa10.32□□□□□ -0.76
TNFRSF1A-214ENST00000543048 SLITRK1Q96PX8 696 aa10.32□□□□□ -0.76
TNFRSF1A-214ENST00000543048 SLC22A12Q96S37 553 aa10.32□□□□□ -0.76
TNFRSF1A-214ENST00000543048 HNRNPABQ99729 332 aaKnown RBP10.32□□□□□ -0.76
TNFRSF1A-214ENST00000543048 DUSP9Q99956 384 aaKnown RBP10.32□□□□□ -0.76
TNFRSF1A-214ENST00000543048 FAM83CQ9BQN1 747 aa10.32□□□□□ -0.76
TNFRSF1A-214ENST00000543048 NIF3L1Q9GZT8 377 aa10.32□□□□□ -0.76
TNFRSF1A-214ENST00000543048 FAM124BQ9H5Z6 455 aaPredicted RBP10.32□□□□□ -0.76
TNFRSF1A-214ENST00000543048 LMAN1LQ9HAT1 526 aa10.32□□□□□ -0.76
TNFRSF1A-214ENST00000543048 GTSE1Q9NYZ3 720 aa10.32□□□□□ -0.76
TNFRSF1A-214ENST00000543048 IL37Q9NZH6 218 aa10.32□□□□□ -0.76
TNFRSF1A-214ENST00000543048 KIAA1468Q9P260 1216 aa10.32□□□□□ -0.76
TNFRSF1A-214ENST00000543048 CHORDC1Q9UHD1 332 aaPredicted RBP10.32□□□□□ -0.76
TNFRSF1A-214ENST00000543048 NDRG2Q9UN36 371 aaKnown RBP10.32□□□□□ -0.76
TNFRSF1A-214ENST00000543048 COQ4Q9Y3A0 265 aa10.32□□□□□ -0.76
TNFRSF1A-214ENST00000543048 PTPRZ1P23471 2315 aaPredicted RBP10.32□□□□□ -0.76
TNFRSF1A-214ENST00000543048 RIF1Q5UIP0 2472 aaKnown RBP10.31□□□□□ -0.76
TNFRSF1A-214ENST00000543048 C2orf78A6NCI8 922 aa10.31□□□□□ -0.76
TNFRSF1A-214ENST00000543048 TNFRSF10BO14763 440 aa10.31□□□□□ -0.76
TNFRSF1A-214ENST00000543048 CILPO75339 1184 aa10.31□□□□□ -0.76
TNFRSF1A-214ENST00000543048 FGFR1OPO95684 399 aaKnown RBP10.31□□□□□ -0.76
TNFRSF1A-214ENST00000543048 ABL1P00519 1130 aa10.31□□□□□ -0.76
TNFRSF1A-214ENST00000543048 CKMP06732 381 aa10.31□□□□□ -0.76
TNFRSF1A-214ENST00000543048 CCDC130P13994 396 aa10.31□□□□□ -0.76
TNFRSF1A-214ENST00000543048 CD58P19256 250 aa10.31□□□□□ -0.76
TNFRSF1A-214ENST00000543048 MLLT3P42568 568 aaPredicted RBP10.31□□□□□ -0.76
TNFRSF1A-214ENST00000543048 MRE11P49959 708 aa10.31□□□□□ -0.76
TNFRSF1A-214ENST00000543048 AMPD2Q01433 879 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 123.7 ms