RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 KLRB1Q12918 225 aa2.52□□□□□ -2.01
TRAV1-1-201ENST00000542354 GRIK2Q13002 908 aa2.52□□□□□ -2.01
TRAV1-1-201ENST00000542354 G3BP1Q13283 466 aaKnown RBP eCLIP2.52□□□□□ -2.01
TRAV1-1-201ENST00000542354 KCNAB2Q13303 367 aa2.52□□□□□ -2.01
TRAV1-1-201ENST00000542354 ADAM9Q13443 819 aa2.52□□□□□ -2.01
TRAV1-1-201ENST00000542354 DMC1Q14565 340 aa2.52□□□□□ -2.01
TRAV1-1-201ENST00000542354 INPP5AQ14642 412 aa2.52□□□□□ -2.01
TRAV1-1-201ENST00000542354 NR1I3Q14994 352 aa2.52□□□□□ -2.01
TRAV1-1-201ENST00000542354 CLCA4Q14CN2 919 aa2.52□□□□□ -2.01
TRAV1-1-201ENST00000542354 PTPAQ15257 358 aa2.52□□□□□ -2.01
TRAV1-1-201ENST00000542354 NKG7Q16617 165 aa2.52□□□□□ -2.01
TRAV1-1-201ENST00000542354 LY6KQ17RY6 165 aa2.52□□□□□ -2.01
TRAV1-1-201ENST00000542354 EIF2S3LQ2VIR3 472 aaKnown RBP2.52□□□□□ -2.01
TRAV1-1-201ENST00000542354 C14orf28Q4W4Y0 310 aa2.52□□□□□ -2.01
TRAV1-1-201ENST00000542354 MUM1L1Q5H9M0 696 aa2.52□□□□□ -2.01
TRAV1-1-201ENST00000542354 TTC39AQ5SRH9 613 aa2.52□□□□□ -2.01
TRAV1-1-201ENST00000542354 ODR4Q5SWX8 454 aa2.52□□□□□ -2.01
TRAV1-1-201ENST00000542354 NSMFQ6X4W1 530 aa2.52□□□□□ -2.01
TRAV1-1-201ENST00000542354 UBE3DQ7Z6J8 389 aa2.52□□□□□ -2.01
TRAV1-1-201ENST00000542354 PALB2Q86YC2 1186 aa2.52□□□□□ -2.01
TRAV1-1-201ENST00000542354 MFSD6LQ8IWD5 586 aa2.52□□□□□ -2.01
TRAV1-1-201ENST00000542354 CCDC82Q8N4S0 544 aa2.52□□□□□ -2.01
TRAV1-1-201ENST00000542354 ANKRD44Q8N8A2 993 aa2.52□□□□□ -2.01
TRAV1-1-201ENST00000542354 VGLL2Q8N8G2 317 aa2.52□□□□□ -2.01
TRAV1-1-201ENST00000542354 DAGLBQ8NCG7 672 aa2.52□□□□□ -2.01
TRAV1-1-201ENST00000542354 RGS22Q8NE09 1264 aa2.52□□□□□ -2.01
TRAV1-1-201ENST00000542354 NSUN7Q8NE18 718 aaKnown RBP2.52□□□□□ -2.01
TRAV1-1-201ENST00000542354 FAM13CQ8NE31 585 aa2.52□□□□□ -2.01
TRAV1-1-201ENST00000542354 MZB1Q8WU39 189 aa2.52□□□□□ -2.01
TRAV1-1-201ENST00000542354 DACT3Q96B18 629 aaPredicted RBP2.52□□□□□ -2.01
TRAV1-1-201ENST00000542354 NSUN4Q96CB9 384 aaKnown RBP2.52□□□□□ -2.01
TRAV1-1-201ENST00000542354 CNOT6LQ96LI5 555 aaKnown RBP2.52□□□□□ -2.01
TRAV1-1-201ENST00000542354 CFAP53Q96M91 514 aa2.52□□□□□ -2.01
TRAV1-1-201ENST00000542354 FNBP1Q96RU3 617 aa2.52□□□□□ -2.01
TRAV1-1-201ENST00000542354 RPS6KC1Q96S38 1066 aa2.52□□□□□ -2.01
TRAV1-1-201ENST00000542354 ADAM2Q99965 735 aa2.52□□□□□ -2.01
TRAV1-1-201ENST00000542354 GAREM1Q9H706 876 aa2.52□□□□□ -2.01
TRAV1-1-201ENST00000542354 CHST12Q9NRB3 414 aa2.52□□□□□ -2.01
TRAV1-1-201ENST00000542354 AATFQ9NY61 560 aaKnown RBP eCLIP2.52□□□□□ -2.01
TRAV1-1-201ENST00000542354 GMIPQ9P107 970 aa2.52□□□□□ -2.01
TRAV1-1-201ENST00000542354 TNFRSF10DQ9UBN6 386 aa2.52□□□□□ -2.01
TRAV1-1-201ENST00000542354 FTSJ1Q9UET6 329 aa2.52□□□□□ -2.01
TRAV1-1-201ENST00000542354 ERRFI1Q9UJM3 462 aaPredicted RBP2.52□□□□□ -2.01
TRAV1-1-201ENST00000542354 RPH3AQ9Y2J0 694 aaPredicted RBP2.52□□□□□ -2.01
TRAV1-1-201ENST00000542354 FAN1Q9Y2M0 1017 aa2.52□□□□□ -2.01
TRAV1-1-201ENST00000542354 CDY2AQ9Y6F7 541 aa2.52□□□□□ -2.01
TRAV1-1-201ENST00000542354 PRRC2CQ9Y520 2896 aaKnown RBP2.52□□□□□ -2.01
TRAV1-1-201ENST00000542354 KMT2CQ8NEZ4 4911 aaKnown RBP2.52□□□□□ -2.01
TRAV1-1-201ENST00000542354 WDR81Q562E7 1941 aa2.52□□□□□ -2.01
TRAV1-1-201ENST00000542354 PKDREJQ9NTG1 2253 aa2.52□□□□□ -2.01
TRAV1-1-201ENST00000542354 PARP14Q460N5 1801 aa2.52□□□□□ -2.01
TRAV1-1-201ENST00000542354 KNL1Q8NG31 2342 aa2.51□□□□□ -2.01
TRAV1-1-201ENST00000542354 PCDH15Q96QU1 1955 aa2.51□□□□□ -2.01
TRAV1-1-201ENST00000542354 A0A1W2PQ27 194 aa2.51□□□□□ -2.01
TRAV1-1-201ENST00000542354 A0A1W2PQ64 194 aa2.51□□□□□ -2.01
TRAV1-1-201ENST00000542354 A0A1W2PQC6 194 aa2.51□□□□□ -2.01
TRAV1-1-201ENST00000542354 OTOL1A6NHN0 477 aaPredicted RBP2.51□□□□□ -2.01
TRAV1-1-201ENST00000542354 CHADO15335 359 aa2.51□□□□□ -2.01
TRAV1-1-201ENST00000542354 REC8O95072 547 aa2.51□□□□□ -2.01
TRAV1-1-201ENST00000542354 URODP06132 367 aa2.51□□□□□ -2.01
TRAV1-1-201ENST00000542354 IFIT2P09913 472 aaKnown RBP2.51□□□□□ -2.01
TRAV1-1-201ENST00000542354 USP17L7P0C7H9 530 aa2.51□□□□□ -2.01
TRAV1-1-201ENST00000542354 ALAS1P13196 640 aa2.51□□□□□ -2.01
TRAV1-1-201ENST00000542354 ZSCAN20P17040 1043 aaPredicted RBP2.51□□□□□ -2.01
TRAV1-1-201ENST00000542354 BPIP17213 487 aa2.51□□□□□ -2.01
TRAV1-1-201ENST00000542354 EIF4BP23588 611 aaKnown RBP2.51□□□□□ -2.01
TRAV1-1-201ENST00000542354 ITGA3P26006 1051 aa2.51□□□□□ -2.01
TRAV1-1-201ENST00000542354 RPL10P27635 214 aaKnown RBP2.51□□□□□ -2.01
TRAV1-1-201ENST00000542354 SSTR2P30874 369 aa2.51□□□□□ -2.01
TRAV1-1-201ENST00000542354 SLC6A4P31645 630 aa2.51□□□□□ -2.01
TRAV1-1-201ENST00000542354 TRHRP34981 398 aaPredicted RBP2.51□□□□□ -2.01
TRAV1-1-201ENST00000542354 P2RY2P41231 377 aa2.51□□□□□ -2.01
TRAV1-1-201ENST00000542354 LEPRP48357 1165 aaKnown RBP2.51□□□□□ -2.01
TRAV1-1-201ENST00000542354 MCM2P49736 904 aa2.51□□□□□ -2.01
TRAV1-1-201ENST00000542354 DUSP3P51452 185 aaPredicted RBP2.51□□□□□ -2.01
TRAV1-1-201ENST00000542354 GABREP78334 506 aa2.51□□□□□ -2.01
TRAV1-1-201ENST00000542354 MRPS6P82932 125 aaKnown RBP2.51□□□□□ -2.01
TRAV1-1-201ENST00000542354 SCRN1Q12765 414 aa2.51□□□□□ -2.01
TRAV1-1-201ENST00000542354 BAATQ14032 418 aaPredicted RBP2.51□□□□□ -2.01
TRAV1-1-201ENST00000542354 SF3A1Q15459 793 aaKnown RBP2.51□□□□□ -2.01
TRAV1-1-201ENST00000542354 CCDC27Q2M243 656 aa2.51□□□□□ -2.01
TRAV1-1-201ENST00000542354 INAVAQ3KP66 663 aa2.51□□□□□ -2.01
TRAV1-1-201ENST00000542354 FBXO43Q4G163 708 aa2.51□□□□□ -2.01
TRAV1-1-201ENST00000542354 PABPC1LQ4VXU2 614 aaKnown RBP2.51□□□□□ -2.01
TRAV1-1-201ENST00000542354 LRRC24Q50LG9 513 aa2.51□□□□□ -2.01
TRAV1-1-201ENST00000542354 FAM78AQ5JUQ0 283 aa2.51□□□□□ -2.01
TRAV1-1-201ENST00000542354 PPM1LQ5SGD2 360 aa2.51□□□□□ -2.01
TRAV1-1-201ENST00000542354 ZFYVE27Q5T4F4 411 aa2.51□□□□□ -2.01
TRAV1-1-201ENST00000542354 SYCP2LQ5T4T6 812 aa2.51□□□□□ -2.01
TRAV1-1-201ENST00000542354 GORABQ5T7V8 394 aa2.51□□□□□ -2.01
TRAV1-1-201ENST00000542354 ANO7Q6IWH7 933 aa2.51□□□□□ -2.01
TRAV1-1-201ENST00000542354 VITQ6UXI7 678 aa2.51□□□□□ -2.01
TRAV1-1-201ENST00000542354 SLC36A4Q6YBV0 504 aa2.51□□□□□ -2.01
TRAV1-1-201ENST00000542354 SEPT14Q6ZU15 432 aa2.51□□□□□ -2.01
TRAV1-1-201ENST00000542354 RSRC2Q7L4I2 434 aaKnown RBP2.51□□□□□ -2.01
TRAV1-1-201ENST00000542354 HAUS6Q7Z4H7 955 aa2.51□□□□□ -2.01
TRAV1-1-201ENST00000542354 RASSF3Q86WH2 238 aa2.51□□□□□ -2.01
TRAV1-1-201ENST00000542354 NOSTRINQ8IVI9 506 aa2.51□□□□□ -2.01
TRAV1-1-201ENST00000542354 SLFN12Q8IYM2 578 aa2.51□□□□□ -2.01
TRAV1-1-201ENST00000542354 ZNF655Q8N720 491 aaPredicted RBP2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms