RNA–Protein interactions for RNA: ENST00000492650.1

VPS36-205, Transcript of vacuolar protein sorting 36 homolog, human

TSL 5

Gene VPS36, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS36-205	ENST00000492650	SNX18	Q96RF0	628 aa		4.08	□□□□□ -1.76
VPS36-205	ENST00000492650	TCF7L1	Q9HCS4	588 aa		4.08	□□□□□ -1.76
VPS36-205	ENST00000492650	TRNAU1AP	Q9NX07	287 aa	Known RBP	4.08	□□□□□ -1.76
VPS36-205	ENST00000492650	ZSCAN32	Q9NX65	697 aa		4.08	□□□□□ -1.76
VPS36-205	ENST00000492650	CACNA1I	Q9P0X4	2223 aa		4.08	□□□□□ -1.76
VPS36-205	ENST00000492650	GABRQ	Q9UN88	632 aa		4.08	□□□□□ -1.76
VPS36-205	ENST00000492650		A0A088AWK7	358 aa		4.07	□□□□□ -1.76
VPS36-205	ENST00000492650	SH3BP5	O60239	455 aa		4.07	□□□□□ -1.76
VPS36-205	ENST00000492650	GCAT	O75600	419 aa		4.07	□□□□□ -1.76
VPS36-205	ENST00000492650	USP1	O94782	785 aa		4.07	□□□□□ -1.76
VPS36-205	ENST00000492650	CHRM5	P08912	532 aa	Predicted RBP	4.07	□□□□□ -1.76
VPS36-205	ENST00000492650	KCNA3	P22001	575 aa		4.07	□□□□□ -1.76
VPS36-205	ENST00000492650	PAX3	P23760	479 aa		4.07	□□□□□ -1.76
VPS36-205	ENST00000492650	FPR3	P25089	353 aa		4.07	□□□□□ -1.76
VPS36-205	ENST00000492650	POLG	P54098	1239 aa	Predicted RBP	4.07	□□□□□ -1.76
VPS36-205	ENST00000492650	WNT3	P56703	355 aa		4.07	□□□□□ -1.76
VPS36-205	ENST00000492650	KRTAP10-9	P60411	292 aa		4.07	□□□□□ -1.76
VPS36-205	ENST00000492650	E2F1	Q01094	437 aa		4.07	□□□□□ -1.76
VPS36-205	ENST00000492650	SET	Q01105	290 aa	Predicted RBP	4.07	□□□□□ -1.76
VPS36-205	ENST00000492650	FHL1	Q13642	323 aa		4.07	□□□□□ -1.76
VPS36-205	ENST00000492650	ZNF268	Q14587	947 aa	Predicted RBP	4.07	□□□□□ -1.76
VPS36-205	ENST00000492650	PLA1A	Q53H76	456 aa		4.07	□□□□□ -1.76
VPS36-205	ENST00000492650	AWAT2	Q6E213	333 aa		4.07	□□□□□ -1.76
VPS36-205	ENST00000492650	CCSAP	Q6IQ19	270 aa	Predicted RBP	4.07	□□□□□ -1.76
VPS36-205	ENST00000492650	DPY19L3	Q6ZPD9	716 aa		4.07	□□□□□ -1.76
VPS36-205	ENST00000492650	DAAM2	Q86T65	1068 aa		4.07	□□□□□ -1.76
VPS36-205	ENST00000492650	SIRT6	Q8N6T7	355 aa		4.07	□□□□□ -1.76
VPS36-205	ENST00000492650	NANOGP1	Q8N7R0	232 aa		4.07	□□□□□ -1.76
VPS36-205	ENST00000492650	TMEM171	Q8WVE6	324 aa		4.07	□□□□□ -1.76
VPS36-205	ENST00000492650	RAPGEF4	Q8WZA2	1011 aa		4.07	□□□□□ -1.76
VPS36-205	ENST00000492650	PPP2R3C	Q969Q6	453 aa		4.07	□□□□□ -1.76
VPS36-205	ENST00000492650	FAM118B	Q9BPY3	351 aa		4.07	□□□□□ -1.76
VPS36-205	ENST00000492650	MESP1	Q9BRJ9	268 aa		4.07	□□□□□ -1.76
VPS36-205	ENST00000492650	THAP7	Q9BT49	309 aa	Predicted RBP	4.07	□□□□□ -1.76
VPS36-205	ENST00000492650	MAF1	Q9H063	256 aa		4.07	□□□□□ -1.76
VPS36-205	ENST00000492650	THRAP3	Q9Y2W1	955 aa	Known RBP	4.07	□□□□□ -1.76
VPS36-205	ENST00000492650	SNX14	Q9Y5W7	946 aa		4.07	□□□□□ -1.76
VPS36-205	ENST00000492650	EID1	Q9Y6B2	187 aa		4.07	□□□□□ -1.76
VPS36-205	ENST00000492650	PSMD9	O00233	223 aa		4.06	□□□□□ -1.76
VPS36-205	ENST00000492650	BTN3A1	O00481	513 aa		4.06	□□□□□ -1.76
VPS36-205	ENST00000492650	CES2	O00748	559 aa		4.06	□□□□□ -1.76
VPS36-205	ENST00000492650	DSCR3	O14972	297 aa		4.06	□□□□□ -1.76
VPS36-205	ENST00000492650	KIF3B	O15066	747 aa		4.06	□□□□□ -1.76
VPS36-205	ENST00000492650	BCAR3	O75815	825 aa		4.06	□□□□□ -1.76
VPS36-205	ENST00000492650	HTR1B	P28222	390 aa		4.06	□□□□□ -1.76
VPS36-205	ENST00000492650	NR4A2	P43354	598 aa		4.06	□□□□□ -1.76
VPS36-205	ENST00000492650	CTBP1	Q13363	440 aa		4.06	□□□□□ -1.76
VPS36-205	ENST00000492650	UBE4A	Q14139	1066 aa		4.06	□□□□□ -1.76
VPS36-205	ENST00000492650	MLC1	Q15049	377 aa		4.06	□□□□□ -1.76
VPS36-205	ENST00000492650	LRRC41	Q15345	812 aa		4.06	□□□□□ -1.76
VPS36-205	ENST00000492650	CYP1B1	Q16678	543 aa		4.06	□□□□□ -1.76
VPS36-205	ENST00000492650	FAM187B	Q17R55	369 aa		4.06	□□□□□ -1.76
VPS36-205	ENST00000492650	ZNF260	Q3ZCT1	412 aa		4.06	□□□□□ -1.76
VPS36-205	ENST00000492650		Q4G0T1	1027 aa		4.06	□□□□□ -1.76
VPS36-205	ENST00000492650	ZNF783	Q6ZMS7	281 aa		4.06	□□□□□ -1.76
VPS36-205	ENST00000492650	TECPR1	Q7Z6L1	1165 aa		4.06	□□□□□ -1.76
VPS36-205	ENST00000492650	DENND1C	Q8IV53	801 aa		4.06	□□□□□ -1.76
VPS36-205	ENST00000492650	NME8	Q8N427	588 aa		4.06	□□□□□ -1.76
VPS36-205	ENST00000492650	OR6B3	Q8NGW1	331 aa		4.06	□□□□□ -1.76
VPS36-205	ENST00000492650	BPIFB1	Q8TDL5	484 aa		4.06	□□□□□ -1.76
VPS36-205	ENST00000492650	DIS3L	Q8TF46	1054 aa	Known RBP	4.06	□□□□□ -1.76
VPS36-205	ENST00000492650	CCDC17	Q96LX7	622 aa		4.06	□□□□□ -1.76
VPS36-205	ENST00000492650	LRGUK	Q96M69	825 aa		4.06	□□□□□ -1.76
VPS36-205	ENST00000492650	PRR25	Q96S07	402 aa		4.06	□□□□□ -1.76
VPS36-205	ENST00000492650	TMEM79	Q9BSE2	394 aa		4.06	□□□□□ -1.76
VPS36-205	ENST00000492650	C17orf80	Q9BSJ5	609 aa		4.06	□□□□□ -1.76
VPS36-205	ENST00000492650	MS4A7	Q9GZW8	240 aa	Predicted RBP	4.06	□□□□□ -1.76
VPS36-205	ENST00000492650	GBA2	Q9HCG7	927 aa	Predicted RBP	4.06	□□□□□ -1.76
VPS36-205	ENST00000492650	CAMSAP3	Q9P1Y5	1249 aa	Predicted RBP	4.06	□□□□□ -1.76
VPS36-205	ENST00000492650	TCEAL9	Q9UHQ7	104 aa		4.06	□□□□□ -1.76
VPS36-205	ENST00000492650	AMFR	Q9UKV5	643 aa		4.06	□□□□□ -1.76
VPS36-205	ENST00000492650		A0A087WWL8	130 aa		4.05	□□□□□ -1.76
VPS36-205	ENST00000492650		A0A1W2PPL8	197 aa		4.05	□□□□□ -1.76
VPS36-205	ENST00000492650		E5RJQ4	531 aa		4.05	□□□□□ -1.76
VPS36-205	ENST00000492650	TRIM38	O00635	465 aa		4.05	□□□□□ -1.76
VPS36-205	ENST00000492650	KCNAB3	O43448	404 aa		4.05	□□□□□ -1.76
VPS36-205	ENST00000492650	TBC1D4	O60343	1298 aa		4.05	□□□□□ -1.76
VPS36-205	ENST00000492650	KIT	P10721	976 aa		4.05	□□□□□ -1.76
VPS36-205	ENST00000492650	MYCL	P12524	364 aa	Predicted RBP	4.05	□□□□□ -1.76
VPS36-205	ENST00000492650	ATP5F1	P24539	256 aa	Predicted RBP	4.05	□□□□□ -1.76
VPS36-205	ENST00000492650	LAMB3	Q13751	1172 aa		4.05	□□□□□ -1.76
VPS36-205	ENST00000492650	MAP9	Q49MG5	647 aa		4.05	□□□□□ -1.76
VPS36-205	ENST00000492650	RNASE12	Q5GAN4	147 aa	Known RBP	4.05	□□□□□ -1.76
VPS36-205	ENST00000492650	GAS2L3	Q86XJ1	694 aa		4.05	□□□□□ -1.76
VPS36-205	ENST00000492650	SPART	Q8N0X7	666 aa		4.05	□□□□□ -1.76
VPS36-205	ENST00000492650	ADAMTS18	Q8TE60	1221 aa		4.05	□□□□□ -1.76
VPS36-205	ENST00000492650	PNISR	Q8TF01	805 aa	Known RBP	4.05	□□□□□ -1.76
VPS36-205	ENST00000492650	KBTBD7	Q8WVZ9	684 aa		4.05	□□□□□ -1.76
VPS36-205	ENST00000492650	NT5C1B	Q96P26	610 aa		4.05	□□□□□ -1.76
VPS36-205	ENST00000492650	FYTTD1	Q96QD9	318 aa	Known RBP	4.05	□□□□□ -1.76
VPS36-205	ENST00000492650	MMS19	Q96T76	1030 aa		4.05	□□□□□ -1.76
VPS36-205	ENST00000492650	WAC	Q9BTA9	647 aa		4.05	□□□□□ -1.76
VPS36-205	ENST00000492650	EFHD1	Q9BUP0	239 aa		4.05	□□□□□ -1.76
VPS36-205	ENST00000492650	TRIM54	Q9BYV2	358 aa		4.05	□□□□□ -1.76
VPS36-205	ENST00000492650	SLC12A5	Q9H2X9	1139 aa		4.05	□□□□□ -1.76
VPS36-205	ENST00000492650	SCAF8	Q9UPN6	1271 aa	Known RBP	4.05	□□□□□ -1.76
VPS36-205	ENST00000492650	LAS1L	Q9Y4W2	734 aa	Known RBP	4.05	□□□□□ -1.76
VPS36-205	ENST00000492650	COMMD10	Q9Y6G5	202 aa		4.05	□□□□□ -1.76
VPS36-205	ENST00000492650	TCRBV5S1A1T	A0A578	114 aa		4.04	□□□□□ -1.76
VPS36-205	ENST00000492650	TMEM233	B4DJY2	109 aa		4.04	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms