RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 WDR44Q5JSH3 913 aa8.78□□□□□ -1
HDAC6-221ENST00000477561 TTI2Q6NXR4 508 aa8.78□□□□□ -1
HDAC6-221ENST00000477561 UNC93AQ86WB7 457 aa8.78□□□□□ -1
HDAC6-221ENST00000477561 NUP93Q8N1F7 819 aa8.78□□□□□ -1
HDAC6-221ENST00000477561 CRYBG2Q8N1P7 616 aa8.78□□□□□ -1
HDAC6-221ENST00000477561 SCAMP5Q8TAC9 235 aa8.78□□□□□ -1
HDAC6-221ENST00000477561 WHAMMQ8TF30 809 aa8.78□□□□□ -1
HDAC6-221ENST00000477561 FAM3CQ92520 227 aa8.78□□□□□ -1
HDAC6-221ENST00000477561 JAKMIP2Q96AA8 810 aa8.78□□□□□ -1
HDAC6-221ENST00000477561 CYFIP2Q96F07 1278 aa8.78□□□□□ -1
HDAC6-221ENST00000477561 SMOQ99835 787 aa8.78□□□□□ -1
HDAC6-221ENST00000477561 ARID3AQ99856 593 aa8.78□□□□□ -1
HDAC6-221ENST00000477561 NT5C1AQ9BXI3 368 aa8.78□□□□□ -1
HDAC6-221ENST00000477561 CYP3A43Q9HB55 503 aa8.78□□□□□ -1
HDAC6-221ENST00000477561 TRPV5Q9NQA5 729 aa8.78□□□□□ -1
HDAC6-221ENST00000477561 KRT82Q9NSB4 513 aa8.78□□□□□ -1
HDAC6-221ENST00000477561 THG1LQ9NWX6 298 aaKnown RBP8.78□□□□□ -1
HDAC6-221ENST00000477561 OBP2AQ9NY56 170 aa8.78□□□□□ -1
HDAC6-221ENST00000477561 TRPM5Q9NZQ8 1165 aa8.78□□□□□ -1
HDAC6-221ENST00000477561 CHORDC1Q9UHD1 332 aaPredicted RBP8.78□□□□□ -1
HDAC6-221ENST00000477561 ATP8B3O60423 1300 aa8.78□□□□□ -1
HDAC6-221ENST00000477561 ZNF840PA6NDX5 716 aa8.77□□□□□ -1.01
HDAC6-221ENST00000477561 SMTNL1A8MU46 457 aa8.77□□□□□ -1.01
HDAC6-221ENST00000477561 MAN2B1O00754 1011 aa8.77□□□□□ -1.01
HDAC6-221ENST00000477561 CILPO75339 1184 aa8.77□□□□□ -1.01
HDAC6-221ENST00000477561 USP17L7P0C7H9 530 aa8.77□□□□□ -1.01
HDAC6-221ENST00000477561 ARSAP15289 507 aa8.77□□□□□ -1.01
HDAC6-221ENST00000477561 YWHAQP27348 245 aa8.77□□□□□ -1.01
HDAC6-221ENST00000477561 PPP1R2P41236 205 aa8.77□□□□□ -1.01
HDAC6-221ENST00000477561 MCCD1P59942 119 aaPredicted RBP8.77□□□□□ -1.01
HDAC6-221ENST00000477561 INCA1Q0VD86 236 aa8.77□□□□□ -1.01
HDAC6-221ENST00000477561 FZD5Q13467 585 aa8.77□□□□□ -1.01
HDAC6-221ENST00000477561 DPCR1Q3MIW9 517 aa8.77□□□□□ -1.01
HDAC6-221ENST00000477561 CC2D1AQ6P1N0 951 aaPredicted RBP8.77□□□□□ -1.01
HDAC6-221ENST00000477561 FRMD5Q7Z6J6 570 aa8.77□□□□□ -1.01
HDAC6-221ENST00000477561 FILIP1Q7Z7B0 1213 aa8.77□□□□□ -1.01
HDAC6-221ENST00000477561 CREBRFQ8IUR6 639 aa8.77□□□□□ -1.01
HDAC6-221ENST00000477561 C1orf210Q8IVY1 113 aa8.77□□□□□ -1.01
HDAC6-221ENST00000477561 ZMIZ2Q8NF64 920 aa8.77□□□□□ -1.01
HDAC6-221ENST00000477561 SH3RF2Q8TEC5 729 aa8.77□□□□□ -1.01
HDAC6-221ENST00000477561 FBXO32Q969P5 355 aa8.77□□□□□ -1.01
HDAC6-221ENST00000477561 SLC35C1Q96A29 364 aa8.77□□□□□ -1.01
HDAC6-221ENST00000477561 SMARCD1Q96GM5 515 aa8.77□□□□□ -1.01
HDAC6-221ENST00000477561 CEP295NLQ96MC4 621 aa8.77□□□□□ -1.01
HDAC6-221ENST00000477561 HEXIM2Q96MH2 286 aaKnown RBP8.77□□□□□ -1.01
HDAC6-221ENST00000477561 NELL2Q99435 816 aa8.77□□□□□ -1.01
HDAC6-221ENST00000477561 TTLL2Q9BWV7 592 aa8.77□□□□□ -1.01
HDAC6-221ENST00000477561 SRRTQ9BXP5 876 aaKnown RBP8.77□□□□□ -1.01
HDAC6-221ENST00000477561 RNF38Q9H0F5 515 aa8.77□□□□□ -1.01
HDAC6-221ENST00000477561 EBF3Q9H4W6 596 aa8.77□□□□□ -1.01
HDAC6-221ENST00000477561 LMAN1LQ9HAT1 526 aa8.77□□□□□ -1.01
HDAC6-221ENST00000477561 CBX8Q9HC52 389 aa8.77□□□□□ -1.01
HDAC6-221ENST00000477561 DMAP1Q9NPF5 467 aaPredicted RBP8.77□□□□□ -1.01
HDAC6-221ENST00000477561 SPATA6Q9NWH7 488 aaPredicted RBP8.77□□□□□ -1.01
HDAC6-221ENST00000477561 SMPD4Q9NXE4 827 aa8.77□□□□□ -1.01
HDAC6-221ENST00000477561 EHD2Q9NZN4 543 aa8.77□□□□□ -1.01
HDAC6-221ENST00000477561 GCNT4Q9P109 453 aa8.77□□□□□ -1.01
HDAC6-221ENST00000477561 ZMYM5Q9UJ78 669 aa8.77□□□□□ -1.01
HDAC6-221ENST00000477561 MRPS17Q9Y2R5 130 aaKnown RBP8.77□□□□□ -1.01
HDAC6-221ENST00000477561 TICRRQ7Z2Z1 1910 aa8.77□□□□□ -1.01
HDAC6-221ENST00000477561 DMDP11532 3685 aa8.76□□□□□ -1.01
HDAC6-221ENST00000477561 BICDL2A1A5D9 508 aa8.76□□□□□ -1.01
HDAC6-221ENST00000477561 OTOL1A6NHN0 477 aaPredicted RBP8.76□□□□□ -1.01
HDAC6-221ENST00000477561 SOBPA7XYQ1 873 aa8.76□□□□□ -1.01
HDAC6-221ENST00000477561 SPECC1L-ADORA2AF8WAN1 911 aa8.76□□□□□ -1.01
HDAC6-221ENST00000477561 TNFRSF10BO14763 440 aa8.76□□□□□ -1.01
HDAC6-221ENST00000477561 SCAMP3O14828 347 aaKnown RBP8.76□□□□□ -1.01
HDAC6-221ENST00000477561 NCAM2O15394 837 aa8.76□□□□□ -1.01
HDAC6-221ENST00000477561 RTN3O95197 1032 aaPredicted RBP8.76□□□□□ -1.01
HDAC6-221ENST00000477561 FAM200BP0CF97 657 aa8.76□□□□□ -1.01
HDAC6-221ENST00000477561 TRIM21P19474 475 aaKnown RBP8.76□□□□□ -1.01
HDAC6-221ENST00000477561 ERCC5P28715 1186 aaPredicted RBP8.76□□□□□ -1.01
HDAC6-221ENST00000477561 FMO5P49326 533 aa8.76□□□□□ -1.01
HDAC6-221ENST00000477561 PGFP49763 221 aa8.76□□□□□ -1.01
HDAC6-221ENST00000477561 SLC5A3P53794 718 aa8.76□□□□□ -1.01
HDAC6-221ENST00000477561 ZXDBP98169 803 aa8.76□□□□□ -1.01
HDAC6-221ENST00000477561 PLCB2Q00722 1185 aa8.76□□□□□ -1.01
HDAC6-221ENST00000477561 PAK1Q13153 545 aa8.76□□□□□ -1.01
HDAC6-221ENST00000477561 ZNF268Q14587 947 aaPredicted RBP8.76□□□□□ -1.01
HDAC6-221ENST00000477561 MTF1Q14872 753 aa8.76□□□□□ -1.01
HDAC6-221ENST00000477561 PON2Q15165 354 aa8.76□□□□□ -1.01
HDAC6-221ENST00000477561 ZNF77Q15935 545 aa8.76□□□□□ -1.01
HDAC6-221ENST00000477561 ITPRIPL2Q3MIP1 535 aa8.76□□□□□ -1.01
HDAC6-221ENST00000477561 PPP1R26Q5T8A7 1209 aaPredicted RBP8.76□□□□□ -1.01
HDAC6-221ENST00000477561 TXNDC11Q6PKC3 985 aa8.76□□□□□ -1.01
HDAC6-221ENST00000477561 C11orf57Q6ZUT1 292 aaPredicted RBP8.76□□□□□ -1.01
HDAC6-221ENST00000477561 GPRIN1Q7Z2K8 1008 aa8.76□□□□□ -1.01
HDAC6-221ENST00000477561 ZNF687Q8N1G0 1237 aa8.76□□□□□ -1.01
HDAC6-221ENST00000477561 SLC4A11Q8NBS3 891 aa8.76□□□□□ -1.01
HDAC6-221ENST00000477561 CEP63Q96MT8 703 aa8.76□□□□□ -1.01
HDAC6-221ENST00000477561 SLITRK1Q96PX8 696 aa8.76□□□□□ -1.01
HDAC6-221ENST00000477561 HNRNPABQ99729 332 aaKnown RBP8.76□□□□□ -1.01
HDAC6-221ENST00000477561 FAM83CQ9BQN1 747 aa8.76□□□□□ -1.01
HDAC6-221ENST00000477561 OSBPL6Q9BZF3 934 aa8.76□□□□□ -1.01
HDAC6-221ENST00000477561 IRF2BPLQ9H1B7 796 aa8.76□□□□□ -1.01
HDAC6-221ENST00000477561 LINC00597Q9H2U6 94 aa8.76□□□□□ -1.01
HDAC6-221ENST00000477561 C8orf33Q9H7E9 229 aaPredicted RBP8.76□□□□□ -1.01
HDAC6-221ENST00000477561 KIF9Q9HAQ2 790 aa8.76□□□□□ -1.01
HDAC6-221ENST00000477561 METTL14Q9HCE5 456 aaKnown RBP8.76□□□□□ -1.01
HDAC6-221ENST00000477561 HPS4Q9NQG7 708 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 161.7 ms