RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 RWDD2AQ9UIY3 292 aa8.2□□□□□ -1.1
BRCC3-208ENST00000453705 CCPG1Q9ULG6 757 aa8.2□□□□□ -1.1
BRCC3-208ENST00000453705 TRAF3IP3Q9Y228 551 aa8.2□□□□□ -1.1
BRCC3-208ENST00000453705 ATP11BQ9Y2G3 1177 aa8.2□□□□□ -1.1
BRCC3-208ENST00000453705 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.2□□□□□ -1.1
BRCC3-208ENST00000453705 PVALEFA0A1B0GWK0 134 aa8.2□□□□□ -1.1
BRCC3-208ENST00000453705 KLRC4O43908 158 aa8.2□□□□□ -1.1
BRCC3-208ENST00000453705 PTP4A3O75365 173 aa8.2□□□□□ -1.1
BRCC3-208ENST00000453705 SGPL1O95470 568 aa8.2□□□□□ -1.1
BRCC3-208ENST00000453705 IL11P20809 199 aa8.2□□□□□ -1.1
BRCC3-208ENST00000453705 SLC16A2P36021 539 aa8.2□□□□□ -1.1
BRCC3-208ENST00000453705 PBX1P40424 430 aa8.2□□□□□ -1.1
BRCC3-208ENST00000453705 ALDH3A2P51648 485 aa8.2□□□□□ -1.1
BRCC3-208ENST00000453705 AP3M2P53677 418 aa8.2□□□□□ -1.1
BRCC3-208ENST00000453705 CXCL9Q07325 125 aa8.2□□□□□ -1.1
BRCC3-208ENST00000453705 SPAG1Q07617 926 aa8.2□□□□□ -1.1
BRCC3-208ENST00000453705 IKQ13123 557 aaPredicted RBP8.2□□□□□ -1.1
BRCC3-208ENST00000453705 MPP3Q13368 585 aa8.2□□□□□ -1.1
BRCC3-208ENST00000453705 DLGAP5Q15398 846 aa8.2□□□□□ -1.1
BRCC3-208ENST00000453705 C1orf185Q5T7R7 199 aa8.2□□□□□ -1.1
BRCC3-208ENST00000453705 AADACL4Q5VUY2 407 aa8.2□□□□□ -1.1
BRCC3-208ENST00000453705 IYDQ6PHW0 289 aa8.2□□□□□ -1.1
BRCC3-208ENST00000453705 LILRA6Q6PI73 481 aa8.2□□□□□ -1.1
BRCC3-208ENST00000453705 C11orf88Q6PI97 169 aa8.2□□□□□ -1.1
BRCC3-208ENST00000453705 USP49Q70CQ1 688 aa8.2□□□□□ -1.1
BRCC3-208ENST00000453705 APTXQ7Z2E3 356 aaKnown RBP8.2□□□□□ -1.1
BRCC3-208ENST00000453705 VSTM4Q8IW00 320 aa8.2□□□□□ -1.1
BRCC3-208ENST00000453705 SULF2Q8IWU5 870 aa8.2□□□□□ -1.1
BRCC3-208ENST00000453705 CLRN3Q8NCR9 226 aa8.2□□□□□ -1.1
BRCC3-208ENST00000453705 CCDC112Q8NEF3 446 aa8.2□□□□□ -1.1
BRCC3-208ENST00000453705 TMEM40Q8WWA1 233 aa8.2□□□□□ -1.1
BRCC3-208ENST00000453705 RIN2Q8WYP3 895 aaPredicted RBP8.2□□□□□ -1.1
BRCC3-208ENST00000453705 TMIGD2Q96BF3 282 aa8.2□□□□□ -1.1
BRCC3-208ENST00000453705 GIMAP5Q96F15 307 aa8.2□□□□□ -1.1
BRCC3-208ENST00000453705 NRBF2Q96F24 287 aa8.2□□□□□ -1.1
BRCC3-208ENST00000453705 TEKT5Q96M29 485 aa8.2□□□□□ -1.1
BRCC3-208ENST00000453705 RAB34Q9BZG1 259 aa8.2□□□□□ -1.1
BRCC3-208ENST00000453705 TMEM60Q9H2L4 133 aa8.2□□□□□ -1.1
BRCC3-208ENST00000453705 KDM3AQ9Y4C1 1321 aa8.2□□□□□ -1.1
BRCC3-208ENST00000453705 A0A1B0GTH6 734 aa8.19□□□□□ -1.1
BRCC3-208ENST00000453705 C16orf96A6NNT2 1141 aa8.19□□□□□ -1.1
BRCC3-208ENST00000453705 AP3D1O14617 1153 aa8.19□□□□□ -1.1
BRCC3-208ENST00000453705 MAGEB3O15480 346 aa8.19□□□□□ -1.1
BRCC3-208ENST00000453705 TPM1P09493 284 aa8.19□□□□□ -1.1
BRCC3-208ENST00000453705 SREBF1P36956 1147 aa8.19□□□□□ -1.1
BRCC3-208ENST00000453705 GPC3P51654 580 aa8.19□□□□□ -1.1
BRCC3-208ENST00000453705 USP46P62068 366 aa8.19□□□□□ -1.1
BRCC3-208ENST00000453705 ACAP2Q15057 778 aa8.19□□□□□ -1.1
BRCC3-208ENST00000453705 SLC2A7Q6PXP3 512 aa8.19□□□□□ -1.1
BRCC3-208ENST00000453705 ADGRG6Q86SQ4 1221 aa8.19□□□□□ -1.1
BRCC3-208ENST00000453705 TXLNBQ8N3L3 684 aa8.19□□□□□ -1.1
BRCC3-208ENST00000453705 DIO2Q92813 273 aa8.19□□□□□ -1.1
BRCC3-208ENST00000453705 AMNQ9BXJ7 453 aa8.19□□□□□ -1.1
BRCC3-208ENST00000453705 DECR2Q9NUI1 292 aa8.19□□□□□ -1.1
BRCC3-208ENST00000453705 LIMA1Q9UHB6 759 aaKnown RBP8.19□□□□□ -1.1
BRCC3-208ENST00000453705 RASAL2Q9UJF2 1139 aa8.19□□□□□ -1.1
BRCC3-208ENST00000453705 ATP23Q9Y6H3 246 aa8.19□□□□□ -1.1
BRCC3-208ENST00000453705 COL11A1P12107 1806 aaPredicted RBP8.19□□□□□ -1.1
BRCC3-208ENST00000453705 LRRC37A2A6NM11 1700 aa8.19□□□□□ -1.1
BRCC3-208ENST00000453705 VWA3AA6NCI4 1184 aa8.19□□□□□ -1.1
BRCC3-208ENST00000453705 UBE2CO00762 179 aa8.19□□□□□ -1.1
BRCC3-208ENST00000453705 ZW10O43264 779 aa8.19□□□□□ -1.1
BRCC3-208ENST00000453705 PALMO75781 387 aa8.19□□□□□ -1.1
BRCC3-208ENST00000453705 NDUFB10O96000 172 aa8.19□□□□□ -1.1
BRCC3-208ENST00000453705 F12P00748 615 aaPredicted RBP8.19□□□□□ -1.1
BRCC3-208ENST00000453705 GSNP06396 782 aa8.19□□□□□ -1.1
BRCC3-208ENST00000453705 RHOXF2BP0C7M4 288 aa8.19□□□□□ -1.1
BRCC3-208ENST00000453705 BMP3P12645 472 aa8.19□□□□□ -1.1
BRCC3-208ENST00000453705 TNFAIP1Q13829 316 aa8.19□□□□□ -1.1
BRCC3-208ENST00000453705 FAM110CQ1W6H9 321 aa8.19□□□□□ -1.1
BRCC3-208ENST00000453705 QRICH1Q2TAL8 776 aa8.19□□□□□ -1.1
BRCC3-208ENST00000453705 LYPD8Q6UX82 237 aa8.19□□□□□ -1.1
BRCC3-208ENST00000453705 LRRC8AQ8IWT6 810 aa8.19□□□□□ -1.1
BRCC3-208ENST00000453705 AGBL5Q8NDL9 886 aa8.19□□□□□ -1.1
BRCC3-208ENST00000453705 GDAP1Q8TB36 358 aa8.19□□□□□ -1.1
BRCC3-208ENST00000453705 ACMSDQ8TDX5 336 aa8.19□□□□□ -1.1
BRCC3-208ENST00000453705 TBCKQ8TEA7 893 aa8.19□□□□□ -1.1
BRCC3-208ENST00000453705 CREB3L4Q8TEY5 395 aa8.19□□□□□ -1.1
BRCC3-208ENST00000453705 ZNF566Q969W8 418 aa8.19□□□□□ -1.1
BRCC3-208ENST00000453705 DHX58Q96C10 678 aa8.19□□□□□ -1.1
BRCC3-208ENST00000453705 LRRC45Q96CN5 670 aa8.19□□□□□ -1.1
BRCC3-208ENST00000453705 MED15Q96RN5 788 aa8.19□□□□□ -1.1
BRCC3-208ENST00000453705 CTAGE1Q96RT6 745 aa8.19□□□□□ -1.1
BRCC3-208ENST00000453705 RHOXF2Q9BQY4 288 aa8.19□□□□□ -1.1
BRCC3-208ENST00000453705 EDEM2Q9BV94 578 aa8.19□□□□□ -1.1
BRCC3-208ENST00000453705 VCX3BQ9H321 246 aa8.19□□□□□ -1.1
BRCC3-208ENST00000453705 PDE11AQ9HCR9 933 aa8.19□□□□□ -1.1
BRCC3-208ENST00000453705 NINJ2Q9NZG7 142 aa8.19□□□□□ -1.1
BRCC3-208ENST00000453705 DKK3Q9UBP4 350 aa8.19□□□□□ -1.1
BRCC3-208ENST00000453705 CHORDC1Q9UHD1 332 aaPredicted RBP8.19□□□□□ -1.1
BRCC3-208ENST00000453705 TRIM33Q9UPN9 1127 aa8.19□□□□□ -1.1
BRCC3-208ENST00000453705 COLQQ9Y215 455 aaPredicted RBP8.19□□□□□ -1.1
BRCC3-208ENST00000453705 LCTP09848 1927 aa8.19□□□□□ -1.1
BRCC3-208ENST00000453705 F5H6K3 240 aa8.18□□□□□ -1.1
BRCC3-208ENST00000453705 SLC25A17O43808 307 aa8.18□□□□□ -1.1
BRCC3-208ENST00000453705 PRPSAP2O60256 369 aa8.18□□□□□ -1.1
BRCC3-208ENST00000453705 MC4RP32245 332 aa8.18□□□□□ -1.1
BRCC3-208ENST00000453705 MCM7P33993 719 aa8.18□□□□□ -1.1
BRCC3-208ENST00000453705 CASP5P51878 434 aa8.18□□□□□ -1.1
BRCC3-208ENST00000453705 KLRC3Q07444 240 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms