RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 SLC7A9P82251 487 aa22.37■■□□□ 1.17
VSX1-206ENST00000444511 NUP93Q8N1F7 819 aa22.37■■□□□ 1.17
VSX1-206ENST00000444511 CAMKK1Q8N5S9 505 aa22.37■■□□□ 1.17
VSX1-206ENST00000444511 FAM160A2Q8N612 972 aaPredicted RBP22.37■■□□□ 1.17
VSX1-206ENST00000444511 RPLP0P6Q8NHW5 317 aa22.37■■□□□ 1.17
VSX1-206ENST00000444511 GAB3Q8WWW8 586 aa22.37■■□□□ 1.17
VSX1-206ENST00000444511 TNIP3Q96KP6 325 aa22.37■■□□□ 1.17
VSX1-206ENST00000444511 MED10Q9BTT4 135 aa22.37■■□□□ 1.17
VSX1-206ENST00000444511 KCTD10Q9H3F6 313 aa22.37■■□□□ 1.17
VSX1-206ENST00000444511 SEMA4GQ9NTN9 838 aa22.37■■□□□ 1.17
VSX1-206ENST00000444511 CPQQ9Y646 472 aa22.37■■□□□ 1.17
VSX1-206ENST00000444511 DYNC1LI1Q9Y6G9 523 aaKnown RBP22.37■■□□□ 1.17
VSX1-206ENST00000444511 RPP40O75818 363 aaKnown RBP22.36■■□□□ 1.17
VSX1-206ENST00000444511 RTN3O95197 1032 aaPredicted RBP22.36■■□□□ 1.17
VSX1-206ENST00000444511 CCDC192P0DO97 292 aa22.36■■□□□ 1.17
VSX1-206ENST00000444511 P4HA1P13674 534 aa22.36■■□□□ 1.17
VSX1-206ENST00000444511 YWHAQP27348 245 aa22.36■■□□□ 1.17
VSX1-206ENST00000444511 ATXN1P54253 815 aaKnown RBP22.36■■□□□ 1.17
VSX1-206ENST00000444511 ZXDBP98169 803 aa22.36■■□□□ 1.17
VSX1-206ENST00000444511 TMEM174Q8WUU8 243 aa22.36■■□□□ 1.17
VSX1-206ENST00000444511 RNF38Q9H0F5 515 aa22.36■■□□□ 1.17
VSX1-206ENST00000444511 SMPD4Q9NXE4 827 aa22.36■■□□□ 1.17
VSX1-206ENST00000444511 HPSEQ9Y251 543 aa22.36■■□□□ 1.17
VSX1-206ENST00000444511 KIF20AO95235 890 aa22.35■■□□□ 1.17
VSX1-206ENST00000444511 VNN1O95497 513 aa22.35■■□□□ 1.17
VSX1-206ENST00000444511 OLFM2O95897 454 aa22.35■■□□□ 1.17
VSX1-206ENST00000444511 OAS1P00973 400 aaKnown RBP22.35■■□□□ 1.17
VSX1-206ENST00000444511 RPN1P04843 607 aaKnown RBP22.35■■□□□ 1.17
VSX1-206ENST00000444511 SYKP43405 635 aa22.35■■□□□ 1.17
VSX1-206ENST00000444511 DLG4P78352 724 aa22.35■■□□□ 1.17
VSX1-206ENST00000444511 CSRP2Q16527 193 aa22.35■■□□□ 1.17
VSX1-206ENST00000444511 CEP135Q66GS9 1140 aa22.35■■□□□ 1.17
VSX1-206ENST00000444511 FILIP1Q7Z7B0 1213 aa22.35■■□□□ 1.17
VSX1-206ENST00000444511 FAM35AQ86V20 835 aa22.35■■□□□ 1.17
VSX1-206ENST00000444511 PDZD8Q8NEN9 1154 aa22.35■■□□□ 1.17
VSX1-206ENST00000444511 CCDC26Q8TAB7 109 aa22.35■■□□□ 1.17
VSX1-206ENST00000444511 FBXO32Q969P5 355 aa22.35■■□□□ 1.17
VSX1-206ENST00000444511 CCDC47Q96A33 483 aaKnown RBP22.35■■□□□ 1.17
VSX1-206ENST00000444511 ACDQ96AP0 544 aa22.35■■□□□ 1.17
VSX1-206ENST00000444511 ELMO3Q96BJ8 720 aa22.35■■□□□ 1.17
VSX1-206ENST00000444511 HHIPQ96QV1 700 aa22.35■■□□□ 1.17
VSX1-206ENST00000444511 RTKNQ9BST9 563 aa22.35■■□□□ 1.17
VSX1-206ENST00000444511 POLR3BQ9NW08 1133 aaPredicted RBP22.35■■□□□ 1.17
VSX1-206ENST00000444511 FRMD4BQ9Y2L6 1034 aa22.35■■□□□ 1.17
VSX1-206ENST00000444511 DNAH14Q0VDD8 3507 aa22.35■■□□□ 1.17
VSX1-206ENST00000444511 PTPRDP23468 1912 aa22.34■■□□□ 1.17
VSX1-206ENST00000444511 GREB1Q4ZG55 1949 aa22.34■■□□□ 1.17
VSX1-206ENST00000444511 SLC9A3R1O14745 358 aaPredicted RBP22.34■■□□□ 1.17
VSX1-206ENST00000444511 CALUO43852 315 aaPredicted RBP22.34■■□□□ 1.17
VSX1-206ENST00000444511 MBL2P11226 248 aaPredicted RBP22.34■■□□□ 1.17
VSX1-206ENST00000444511 SGSM1Q2NKQ1 1148 aa22.34■■□□□ 1.17
VSX1-206ENST00000444511 PRR23CQ6ZRP0 262 aa22.34■■□□□ 1.17
VSX1-206ENST00000444511 SYT13Q7L8C5 426 aa22.34■■□□□ 1.17
VSX1-206ENST00000444511 CACNA2D4Q7Z3S7 1137 aa22.34■■□□□ 1.17
VSX1-206ENST00000444511 DDX42Q86XP3 938 aaKnown RBP eCLIP22.34■■□□□ 1.17
VSX1-206ENST00000444511 KIAA1958Q8N8K9 716 aa22.34■■□□□ 1.17
VSX1-206ENST00000444511 TMC2Q8TDI7 906 aa22.34■■□□□ 1.17
VSX1-206ENST00000444511 EZH1Q92800 747 aaPredicted RBP22.34■■□□□ 1.17
VSX1-206ENST00000444511 CHAMP1Q96JM3 812 aa22.34■■□□□ 1.17
VSX1-206ENST00000444511 KCNK16Q96T55 309 aa22.34■■□□□ 1.17
VSX1-206ENST00000444511 SDCBP2Q9H190 292 aa22.34■■□□□ 1.17
VSX1-206ENST00000444511 DMAP1Q9NPF5 467 aaPredicted RBP22.34■■□□□ 1.17
VSX1-206ENST00000444511 CFAP97Q9P2B7 532 aa22.34■■□□□ 1.17
VSX1-206ENST00000444511 ANAPC1Q9H1A4 1944 aa22.33■■□□□ 1.17
VSX1-206ENST00000444511 AXIN1O15169 862 aa22.33■■□□□ 1.17
VSX1-206ENST00000444511 FOXD2O60548 495 aaPredicted RBP22.33■■□□□ 1.17
VSX1-206ENST00000444511 DMC1Q14565 340 aa22.33■■□□□ 1.17
VSX1-206ENST00000444511 ZACNQ401N2 412 aa22.33■■□□□ 1.17
VSX1-206ENST00000444511 ACOT1Q86TX2 421 aa22.33■■□□□ 1.17
VSX1-206ENST00000444511 NETO1Q8TDF5 533 aa22.33■■□□□ 1.17
VSX1-206ENST00000444511 OVCA2Q8WZ82 227 aa22.33■■□□□ 1.17
VSX1-206ENST00000444511 TAF4BQ92750 862 aa22.33■■□□□ 1.17
VSX1-206ENST00000444511 SMARCD1Q96GM5 515 aa22.33■■□□□ 1.17
VSX1-206ENST00000444511 LOC105378220A0A1B0GUY1 285 aaPredicted RBP22.32■■□□□ 1.16
VSX1-206ENST00000444511 SCAMP3O14828 347 aaKnown RBP22.32■■□□□ 1.16
VSX1-206ENST00000444511 AP1G2O75843 785 aa22.32■■□□□ 1.16
VSX1-206ENST00000444511 AKAP3O75969 853 aa22.32■■□□□ 1.16
VSX1-206ENST00000444511 CYP17A1P05093 508 aa22.32■■□□□ 1.16
VSX1-206ENST00000444511 OPRD1P41143 372 aa22.32■■□□□ 1.16
VSX1-206ENST00000444511 PIK3CAP42336 1068 aa22.32■■□□□ 1.16
VSX1-206ENST00000444511 NDUFA8P51970 172 aa22.32■■□□□ 1.16
VSX1-206ENST00000444511 SLC5A3P53794 718 aa22.32■■□□□ 1.16
VSX1-206ENST00000444511 PAQR9Q6ZVX9 377 aa22.32■■□□□ 1.16
VSX1-206ENST00000444511 SV2AQ7L0J3 742 aa22.32■■□□□ 1.16
VSX1-206ENST00000444511 KBTBD6Q86V97 674 aa22.32■■□□□ 1.16
VSX1-206ENST00000444511 LOXL4Q96JB6 756 aa22.32■■□□□ 1.16
VSX1-206ENST00000444511 KRT82Q9NSB4 513 aa22.32■■□□□ 1.16
VSX1-206ENST00000444511 CHORDC1Q9UHD1 332 aaPredicted RBP22.32■■□□□ 1.16
VSX1-206ENST00000444511 TRAF3IP3Q9Y228 551 aa22.32■■□□□ 1.16
VSX1-206ENST00000444511 ZDHHC9Q9Y397 364 aa22.32■■□□□ 1.16
VSX1-206ENST00000444511 DCDC2BA2VCK2 349 aa22.31■■□□□ 1.16
VSX1-206ENST00000444511 IKBKBO14920 756 aa22.31■■□□□ 1.16
VSX1-206ENST00000444511 APBB3O95704 486 aa22.31■■□□□ 1.16
VSX1-206ENST00000444511 PRR29P0C7W0 189 aa22.31■■□□□ 1.16
VSX1-206ENST00000444511 HECTD3Q5T447 861 aa22.31■■□□□ 1.16
VSX1-206ENST00000444511 ADGRG2Q8IZP9 1017 aa22.31■■□□□ 1.16
VSX1-206ENST00000444511 FUKQ8N0W3 1084 aa22.31■■□□□ 1.16
VSX1-206ENST00000444511 SCAMP5Q8TAC9 235 aa22.31■■□□□ 1.16
VSX1-206ENST00000444511 ARRDC1-AS1Q9H2J1 176 aa22.31■■□□□ 1.16
VSX1-206ENST00000444511 ATP6V1DQ9Y5K8 247 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms