RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 BTNL10A8MVZ5 291 aa11.05□□□□□ -0.64
TOP3B-210ENST00000444502 I3L4J1 428 aa11.05□□□□□ -0.64
TOP3B-210ENST00000444502 ARL4CP56559 192 aa11.05□□□□□ -0.64
TOP3B-210ENST00000444502 CRHR2Q13324 411 aa11.05□□□□□ -0.64
TOP3B-210ENST00000444502 PRPSAP1Q14558 356 aa11.05□□□□□ -0.64
TOP3B-210ENST00000444502 PSMD6Q15008 389 aa11.05□□□□□ -0.64
TOP3B-210ENST00000444502 CCL14Q16627 93 aa11.05□□□□□ -0.64
TOP3B-210ENST00000444502 ANKRD20A3Q5VUR7 823 aa11.05□□□□□ -0.64
TOP3B-210ENST00000444502 IQCKQ8N0W5 287 aa11.05□□□□□ -0.64
TOP3B-210ENST00000444502 AGAP3Q96P47 875 aa11.05□□□□□ -0.64
TOP3B-210ENST00000444502 CCDC68Q9H2F9 335 aa11.05□□□□□ -0.64
TOP3B-210ENST00000444502 ZNF711Q9Y462 761 aa11.05□□□□□ -0.64
TOP3B-210ENST00000444502 PCDHA3Q9Y5H8 950 aa11.05□□□□□ -0.64
TOP3B-210ENST00000444502 A0A0G2JLL6 359 aaPredicted RBP11.04□□□□□ -0.64
TOP3B-210ENST00000444502 LACTBL1A8MY62 500 aa11.04□□□□□ -0.64
TOP3B-210ENST00000444502 STK25O00506 426 aa11.04□□□□□ -0.64
TOP3B-210ENST00000444502 CES2O00748 559 aa11.04□□□□□ -0.64
TOP3B-210ENST00000444502 LYPLA2O95372 231 aa11.04□□□□□ -0.64
TOP3B-210ENST00000444502 SHBGP04278 402 aa11.04□□□□□ -0.64
TOP3B-210ENST00000444502 NCAM1P13591 858 aa11.04□□□□□ -0.64
TOP3B-210ENST00000444502 SULT1E1P49888 294 aa11.04□□□□□ -0.64
TOP3B-210ENST00000444502 EIF3EP60228 445 aaKnown RBP11.04□□□□□ -0.64
TOP3B-210ENST00000444502 CAV1Q03135 178 aa11.04□□□□□ -0.64
TOP3B-210ENST00000444502 BFSP2Q13515 415 aa11.04□□□□□ -0.64
TOP3B-210ENST00000444502 PRRT2Q7Z6L0 340 aaPredicted RBP11.04□□□□□ -0.64
TOP3B-210ENST00000444502 MCUQ8NE86 351 aa11.04□□□□□ -0.64
TOP3B-210ENST00000444502 GABPB2Q8TAK5 448 aaPredicted RBP11.04□□□□□ -0.64
TOP3B-210ENST00000444502 SLC7A14Q8TBB6 771 aa11.04□□□□□ -0.64
TOP3B-210ENST00000444502 PWWP2AQ96N64 755 aa11.04□□□□□ -0.64
TOP3B-210ENST00000444502 C10orf88Q9H8K7 445 aa11.04□□□□□ -0.64
TOP3B-210ENST00000444502 TMEM39AQ9NV64 488 aa11.04□□□□□ -0.64
TOP3B-210ENST00000444502 ZMYM2Q9UBW7 1377 aa11.04□□□□□ -0.64
TOP3B-210ENST00000444502 TMEM120BA0PK00 339 aa11.04□□□□□ -0.64
TOP3B-210ENST00000444502 GIPC1O14908 333 aa11.04□□□□□ -0.64
TOP3B-210ENST00000444502 RTN3O95197 1032 aaPredicted RBP11.04□□□□□ -0.64
TOP3B-210ENST00000444502 AGTP01019 485 aa11.04□□□□□ -0.64
TOP3B-210ENST00000444502 IRF1P10914 325 aa11.04□□□□□ -0.64
TOP3B-210ENST00000444502 KCNA2P16389 499 aa11.04□□□□□ -0.64
TOP3B-210ENST00000444502 HTRA3P83110 453 aa11.04□□□□□ -0.64
TOP3B-210ENST00000444502 ROR2Q01974 943 aaKnown RBP11.04□□□□□ -0.64
TOP3B-210ENST00000444502 SLC27A1Q6PCB7 646 aa11.04□□□□□ -0.64
TOP3B-210ENST00000444502 TTC30AQ86WT1 665 aa11.04□□□□□ -0.64
TOP3B-210ENST00000444502 LPPQ93052 612 aa11.04□□□□□ -0.64
TOP3B-210ENST00000444502 MTIF3Q9H2K0 278 aaKnown RBP11.04□□□□□ -0.64
TOP3B-210ENST00000444502 XPNPEP1Q9NQW7 623 aa11.04□□□□□ -0.64
TOP3B-210ENST00000444502 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.04□□□□□ -0.64
TOP3B-210ENST00000444502 AHCYL1O43865 530 aa11.04□□□□□ -0.64
TOP3B-210ENST00000444502 FAM200BP0CF97 657 aa11.04□□□□□ -0.64
TOP3B-210ENST00000444502 TROVE2P10155 538 aaKnown RBP eCLIP11.04□□□□□ -0.64
TOP3B-210ENST00000444502 MAGEA4P43358 317 aa11.04□□□□□ -0.64
TOP3B-210ENST00000444502 SERPINB4P48594 390 aa11.04□□□□□ -0.64
TOP3B-210ENST00000444502 FBXO47Q5MNV8 452 aa11.04□□□□□ -0.64
TOP3B-210ENST00000444502 PLEKHO2Q8TD55 490 aa11.04□□□□□ -0.64
TOP3B-210ENST00000444502 CRYGNQ8WXF5 182 aa11.04□□□□□ -0.64
TOP3B-210ENST00000444502 CDY2AQ9Y6F7 541 aa11.04□□□□□ -0.64
TOP3B-210ENST00000444502 NCANO14594 1321 aa11.03□□□□□ -0.64
TOP3B-210ENST00000444502 F8VP50 259 aa11.03□□□□□ -0.64
TOP3B-210ENST00000444502 DPYSL4O14531 572 aa11.03□□□□□ -0.64
TOP3B-210ENST00000444502 APOEP02649 317 aa11.03□□□□□ -0.64
TOP3B-210ENST00000444502 ZBTB48P10074 688 aaPredicted RBP11.03□□□□□ -0.64
TOP3B-210ENST00000444502 ERFP50548 548 aa11.03□□□□□ -0.64
TOP3B-210ENST00000444502 CWF19L1Q69YN2 538 aaKnown RBP11.03□□□□□ -0.64
TOP3B-210ENST00000444502 JADE1Q6IE81 842 aa11.03□□□□□ -0.64
TOP3B-210ENST00000444502 ZNF449Q6P9G9 518 aa11.03□□□□□ -0.64
TOP3B-210ENST00000444502 ABHD15Q6UXT9 468 aa11.03□□□□□ -0.64
TOP3B-210ENST00000444502 RAPH1Q70E73 1250 aa11.03□□□□□ -0.64
TOP3B-210ENST00000444502 TRMT10CQ7L0Y3 403 aaKnown RBP11.03□□□□□ -0.64
TOP3B-210ENST00000444502 ELMOD1Q8N336 334 aa11.03□□□□□ -0.64
TOP3B-210ENST00000444502 SCYL1Q96KG9 808 aa11.03□□□□□ -0.64
TOP3B-210ENST00000444502 TGS1Q96RS0 853 aaKnown RBP11.03□□□□□ -0.64
TOP3B-210ENST00000444502 TMEM121Q9BTD3 319 aa11.03□□□□□ -0.64
TOP3B-210ENST00000444502 ECT2Q9H8V3 914 aa11.03□□□□□ -0.64
TOP3B-210ENST00000444502 RPS6KL1Q9Y6S9 549 aa11.03□□□□□ -0.64
TOP3B-210ENST00000444502 DFFAO00273 331 aa11.03□□□□□ -0.64
TOP3B-210ENST00000444502 DDX3YO15523 660 aaKnown RBP11.03□□□□□ -0.64
TOP3B-210ENST00000444502 RBP3P10745 1247 aa11.03□□□□□ -0.64
TOP3B-210ENST00000444502 RARGP13631 454 aa11.03□□□□□ -0.64
TOP3B-210ENST00000444502 ZACNQ401N2 412 aa11.03□□□□□ -0.64
TOP3B-210ENST00000444502 DUSP28Q4G0W2 176 aa11.03□□□□□ -0.64
TOP3B-210ENST00000444502 MFSD7Q6UXD7 560 aa11.03□□□□□ -0.64
TOP3B-210ENST00000444502 PPM1NQ8N819 430 aa11.03□□□□□ -0.64
TOP3B-210ENST00000444502 HELQQ8TDG4 1101 aa11.03□□□□□ -0.64
TOP3B-210ENST00000444502 USP33Q8TEY7 942 aa11.03□□□□□ -0.64
TOP3B-210ENST00000444502 ATP2A3Q93084 1043 aa11.03□□□□□ -0.64
TOP3B-210ENST00000444502 TTC17Q96AE7 1141 aa11.03□□□□□ -0.64
TOP3B-210ENST00000444502 RILPQ96NA2 401 aa11.03□□□□□ -0.64
TOP3B-210ENST00000444502 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.03□□□□□ -0.64
TOP3B-210ENST00000444502 IGF2BP3O00425 579 aaKnown RBP eCLIP11.03□□□□□ -0.64
TOP3B-210ENST00000444502 MLH1P40692 756 aa11.03□□□□□ -0.64
TOP3B-210ENST00000444502 RPL7AP62424 266 aaKnown RBP11.03□□□□□ -0.64
TOP3B-210ENST00000444502 PIGHQ14442 188 aaPredicted RBP11.03□□□□□ -0.64
TOP3B-210ENST00000444502 ANKRD23Q86SG2 305 aa11.03□□□□□ -0.64
TOP3B-210ENST00000444502 GANCQ8TET4 914 aa11.03□□□□□ -0.64
TOP3B-210ENST00000444502 SEPT8Q92599 483 aa11.03□□□□□ -0.64
TOP3B-210ENST00000444502 NAF1Q96HR8 494 aaKnown RBP11.03□□□□□ -0.64
TOP3B-210ENST00000444502 MAML3Q96JK9 1138 aa11.03□□□□□ -0.64
TOP3B-210ENST00000444502 GPR20Q99678 358 aa11.03□□□□□ -0.64
TOP3B-210ENST00000444502 OSBPL7Q9BZF2 842 aa11.03□□□□□ -0.64
TOP3B-210ENST00000444502 VCX3BQ9H321 246 aa11.03□□□□□ -0.64
TOP3B-210ENST00000444502 KDM4CQ9H3R0 1056 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms