RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 JUPP14923 745 aa6.1□□□□□ -1.43
HMGB3P5-201ENST00000428894 PCSK6P29122 969 aa6.1□□□□□ -1.43
HMGB3P5-201ENST00000428894 ZNF267Q14586 743 aaPredicted RBP6.1□□□□□ -1.43
HMGB3P5-201ENST00000428894 IQCB1Q15051 598 aa6.1□□□□□ -1.43
HMGB3P5-201ENST00000428894 ZNF618Q5T7W0 954 aa6.1□□□□□ -1.43
HMGB3P5-201ENST00000428894 CELF5Q8N6W0 485 aaKnown RBP6.1□□□□□ -1.43
HMGB3P5-201ENST00000428894 DDB2Q92466 427 aa6.1□□□□□ -1.43
HMGB3P5-201ENST00000428894 MTFMTQ96DP5 389 aaKnown RBP6.1□□□□□ -1.43
HMGB3P5-201ENST00000428894 CPA4Q9UI42 421 aa6.1□□□□□ -1.43
HMGB3P5-201ENST00000428894 PLEKHM1Q9Y4G2 1056 aa6.1□□□□□ -1.43
HMGB3P5-201ENST00000428894 SPHKAPQ2M3C7 1700 aa6.1□□□□□ -1.43
HMGB3P5-201ENST00000428894 XRN1Q8IZH2 1706 aaKnown RBP6.1□□□□□ -1.43
HMGB3P5-201ENST00000428894 COL22A1Q8NFW1 1626 aaPredicted RBP6.1□□□□□ -1.43
HMGB3P5-201ENST00000428894 UNC13BO14795 1591 aa6.1□□□□□ -1.43
HMGB3P5-201ENST00000428894 VPS8Q8N3P4 1428 aa6.09□□□□□ -1.43
HMGB3P5-201ENST00000428894 ANKRD50Q9ULJ7 1429 aa6.09□□□□□ -1.43
HMGB3P5-201ENST00000428894 INO80B-WBP1J3KQ70 363 aa6.09□□□□□ -1.43
HMGB3P5-201ENST00000428894 AP1G1O43747 822 aa6.09□□□□□ -1.43
HMGB3P5-201ENST00000428894 GRPP07492 148 aa6.09□□□□□ -1.43
HMGB3P5-201ENST00000428894 PXNP49023 591 aaPredicted RBP6.09□□□□□ -1.43
HMGB3P5-201ENST00000428894 LOXL3P58215 753 aa6.09□□□□□ -1.43
HMGB3P5-201ENST00000428894 LILRA4P59901 499 aa6.09□□□□□ -1.43
HMGB3P5-201ENST00000428894 ARHGAP40Q5TG30 622 aa6.09□□□□□ -1.43
HMGB3P5-201ENST00000428894 SUMO4Q6EEV6 95 aa6.09□□□□□ -1.43
HMGB3P5-201ENST00000428894 KRT27Q7Z3Y8 459 aa6.09□□□□□ -1.43
HMGB3P5-201ENST00000428894 PLBD2Q8NHP8 589 aa6.09□□□□□ -1.43
HMGB3P5-201ENST00000428894 PUS7Q96PZ0 661 aaKnown RBP6.09□□□□□ -1.43
HMGB3P5-201ENST00000428894 INO80BQ9C086 356 aaPredicted RBP6.09□□□□□ -1.43
HMGB3P5-201ENST00000428894 CNNM1Q9NRU3 951 aa6.09□□□□□ -1.43
HMGB3P5-201ENST00000428894 TYW1Q9NV66 732 aaKnown RBP6.09□□□□□ -1.43
HMGB3P5-201ENST00000428894 SERTAD3Q9UJW9 196 aa6.09□□□□□ -1.43
HMGB3P5-201ENST00000428894 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.09□□□□□ -1.43
HMGB3P5-201ENST00000428894 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.08□□□□□ -1.44
HMGB3P5-201ENST00000428894 DNAJC9-AS1A6NH13 148 aa6.08□□□□□ -1.44
HMGB3P5-201ENST00000428894 TARM1B6A8C7 271 aa6.08□□□□□ -1.44
HMGB3P5-201ENST00000428894 SLC16A3O15427 465 aaKnown RBP6.08□□□□□ -1.44
HMGB3P5-201ENST00000428894 TLR5O60602 858 aa6.08□□□□□ -1.44
HMGB3P5-201ENST00000428894 LIPAP38571 399 aa6.08□□□□□ -1.44
HMGB3P5-201ENST00000428894 SP2Q02086 613 aa6.08□□□□□ -1.44
HMGB3P5-201ENST00000428894 HNRNPA0Q13151 305 aaKnown RBP6.08□□□□□ -1.44
HMGB3P5-201ENST00000428894 TTF1Q15361 905 aaPredicted RBP6.08□□□□□ -1.44
HMGB3P5-201ENST00000428894 TMEM119Q4V9L6 283 aa6.08□□□□□ -1.44
HMGB3P5-201ENST00000428894 MAVSQ7Z434 540 aa6.08□□□□□ -1.44
HMGB3P5-201ENST00000428894 ANKS1AQ92625 1134 aa6.08□□□□□ -1.44
HMGB3P5-201ENST00000428894 MOGAT1Q96PD6 335 aa6.08□□□□□ -1.44
HMGB3P5-201ENST00000428894 PTDSS2Q9BVG9 487 aa6.08□□□□□ -1.44
HMGB3P5-201ENST00000428894 RHOBTB2Q9BYZ6 727 aa6.08□□□□□ -1.44
HMGB3P5-201ENST00000428894 SLC12A5Q9H2X9 1139 aa6.08□□□□□ -1.44
HMGB3P5-201ENST00000428894 PNMA8BQ9ULN7 279 aaPredicted RBP6.08□□□□□ -1.44
HMGB3P5-201ENST00000428894 BRWD3Q6RI45 1802 aa6.08□□□□□ -1.44
HMGB3P5-201ENST00000428894 ADGRL2O95490 1459 aa6.08□□□□□ -1.44
HMGB3P5-201ENST00000428894 METP08581 1390 aa6.07□□□□□ -1.44
HMGB3P5-201ENST00000428894 CLCN2P51788 898 aa6.07□□□□□ -1.44
HMGB3P5-201ENST00000428894 TFF2Q03403 129 aa6.07□□□□□ -1.44
HMGB3P5-201ENST00000428894 MCL1Q07820 350 aa6.07□□□□□ -1.44
HMGB3P5-201ENST00000428894 FGL2Q14314 439 aa6.07□□□□□ -1.44
HMGB3P5-201ENST00000428894 TREML2Q5T2D2 321 aa6.07□□□□□ -1.44
HMGB3P5-201ENST00000428894 KIAA1614Q5VZ46 1190 aa6.07□□□□□ -1.44
HMGB3P5-201ENST00000428894 CEP85Q6P2H3 762 aa6.07□□□□□ -1.44
HMGB3P5-201ENST00000428894 ANKRD16Q6P6B7 361 aa6.07□□□□□ -1.44
HMGB3P5-201ENST00000428894 SEMA6DQ8NFY4 1073 aa6.07□□□□□ -1.44
HMGB3P5-201ENST00000428894 DIS3LQ8TF46 1054 aaKnown RBP6.07□□□□□ -1.44
HMGB3P5-201ENST00000428894 SLC29A3Q9BZD2 475 aa6.07□□□□□ -1.44
HMGB3P5-201ENST00000428894 DDX56Q9NY93 547 aaKnown RBP6.07□□□□□ -1.44
HMGB3P5-201ENST00000428894 SH3BP4Q9P0V3 963 aa6.07□□□□□ -1.44
HMGB3P5-201ENST00000428894 XPR1Q9UBH6 696 aa6.07□□□□□ -1.44
HMGB3P5-201ENST00000428894 STAP2Q9UGK3 403 aa6.07□□□□□ -1.44
HMGB3P5-201ENST00000428894 SERGEFQ9UGK8 458 aa6.07□□□□□ -1.44
HMGB3P5-201ENST00000428894 ZNF180Q9UJW8 692 aa6.07□□□□□ -1.44
HMGB3P5-201ENST00000428894 SSX2IPQ9Y2D8 614 aa6.07□□□□□ -1.44
HMGB3P5-201ENST00000428894 NALCNQ8IZF0 1738 aa6.07□□□□□ -1.44
HMGB3P5-201ENST00000428894 COL3A1P02461 1466 aaPredicted RBP6.07□□□□□ -1.44
HMGB3P5-201ENST00000428894 MYOM2P54296 1465 aa6.07□□□□□ -1.44
HMGB3P5-201ENST00000428894 RALGAPBQ86X10 1494 aa6.07□□□□□ -1.44
HMGB3P5-201ENST00000428894 E9PCH4 1651 aa6.07□□□□□ -1.44
HMGB3P5-201ENST00000428894 IQGAP3Q86VI3 1631 aa6.07□□□□□ -1.44
HMGB3P5-201ENST00000428894 E2F8A0AVK6 867 aa6.06□□□□□ -1.44
HMGB3P5-201ENST00000428894 H0YIZ8 118 aa6.06□□□□□ -1.44
HMGB3P5-201ENST00000428894 QSOX1O00391 747 aa6.06□□□□□ -1.44
HMGB3P5-201ENST00000428894 JTBO76095 146 aa6.06□□□□□ -1.44
HMGB3P5-201ENST00000428894 CELA2AP08217 269 aa6.06□□□□□ -1.44
HMGB3P5-201ENST00000428894 IL6RP08887 468 aaPredicted RBP6.06□□□□□ -1.44
HMGB3P5-201ENST00000428894 PDGFRBP09619 1106 aa6.06□□□□□ -1.44
HMGB3P5-201ENST00000428894 HSPA6P17066 643 aa6.06□□□□□ -1.44
HMGB3P5-201ENST00000428894 PPIFP30405 207 aaKnown RBP6.06□□□□□ -1.44
HMGB3P5-201ENST00000428894 CYP2C18P33260 490 aa6.06□□□□□ -1.44
HMGB3P5-201ENST00000428894 IGBP1P78318 339 aa6.06□□□□□ -1.44
HMGB3P5-201ENST00000428894 SLC10A2Q12908 348 aaPredicted RBP6.06□□□□□ -1.44
HMGB3P5-201ENST00000428894 GRM1Q13255 1194 aa6.06□□□□□ -1.44
HMGB3P5-201ENST00000428894 PIN1Q13526 163 aaPredicted RBP6.06□□□□□ -1.44
HMGB3P5-201ENST00000428894 E2F2Q14209 437 aa6.06□□□□□ -1.44
HMGB3P5-201ENST00000428894 RGS7BPQ6MZT1 257 aaPredicted RBP6.06□□□□□ -1.44
HMGB3P5-201ENST00000428894 SLC29A4Q7RTT9 530 aa6.06□□□□□ -1.44
HMGB3P5-201ENST00000428894 WDR53Q7Z5U6 358 aaPredicted RBP6.06□□□□□ -1.44
HMGB3P5-201ENST00000428894 FANCBQ8NB91 859 aa6.06□□□□□ -1.44
HMGB3P5-201ENST00000428894 STAG1Q8WVM7 1258 aa6.06□□□□□ -1.44
HMGB3P5-201ENST00000428894 JPH3Q8WXH2 748 aaPredicted RBP6.06□□□□□ -1.44
HMGB3P5-201ENST00000428894 ATG4AQ8WYN0 398 aa6.06□□□□□ -1.44
HMGB3P5-201ENST00000428894 MRGPRX1Q96LB2 322 aa6.06□□□□□ -1.44
HMGB3P5-201ENST00000428894 LRGUKQ96M69 825 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms