RNA–Protein interactions for RNA: ENST00000428693.1

TTC3-208, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-208ENST00000428693 NACA2Q9H009 215 aa12.79□□□□□ -0.36
TTC3-208ENST00000428693 MMRN2Q9H8L6 949 aa12.79□□□□□ -0.36
TTC3-208ENST00000428693 GCNT4Q9P109 453 aa12.79□□□□□ -0.36
TTC3-208ENST00000428693 ARHGAP26Q9UNA1 814 aa12.79□□□□□ -0.36
TTC3-208ENST00000428693 MAPK8IP1Q9UQF2 711 aa12.79□□□□□ -0.36
TTC3-208ENST00000428693 FRMD4BQ9Y2L6 1034 aa12.79□□□□□ -0.36
TTC3-208ENST00000428693 NME7Q9Y5B8 376 aa12.79□□□□□ -0.36
TTC3-208ENST00000428693 ANAPC1Q9H1A4 1944 aa12.79□□□□□ -0.36
TTC3-208ENST00000428693 SPTBN2O15020 2390 aa12.79□□□□□ -0.36
TTC3-208ENST00000428693 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.78□□□□□ -0.36
TTC3-208ENST00000428693 DCDC2BA2VCK2 349 aa12.78□□□□□ -0.36
TTC3-208ENST00000428693 ZNF840PA6NDX5 716 aa12.78□□□□□ -0.36
TTC3-208ENST00000428693 RPP40O75818 363 aaKnown RBP12.78□□□□□ -0.36
TTC3-208ENST00000428693 PAPSS2O95340 614 aaPredicted RBP12.78□□□□□ -0.36
TTC3-208ENST00000428693 CMA1P23946 247 aa12.78□□□□□ -0.36
TTC3-208ENST00000428693 YWHAQP27348 245 aa12.78□□□□□ -0.36
TTC3-208ENST00000428693 PIK3CAP42336 1068 aa12.78□□□□□ -0.36
TTC3-208ENST00000428693 PPP3CCP48454 512 aa12.78□□□□□ -0.36
TTC3-208ENST00000428693 AP3M2P53677 418 aa12.78□□□□□ -0.36
TTC3-208ENST00000428693 NOP14P78316 857 aaKnown RBP12.78□□□□□ -0.36
TTC3-208ENST00000428693 DLG4P78352 724 aa12.78□□□□□ -0.36
TTC3-208ENST00000428693 CCDC6Q16204 474 aa12.78□□□□□ -0.36
TTC3-208ENST00000428693 C2orf27AQ580R0 203 aa12.78□□□□□ -0.36
TTC3-208ENST00000428693 FILIP1Q7Z7B0 1213 aa12.78□□□□□ -0.36
TTC3-208ENST00000428693 ACOT1Q86TX2 421 aa12.78□□□□□ -0.36
TTC3-208ENST00000428693 NUP93Q8N1F7 819 aa12.78□□□□□ -0.36
TTC3-208ENST00000428693 FAM160A2Q8N612 972 aaPredicted RBP12.78□□□□□ -0.36
TTC3-208ENST00000428693 PARD3BQ8TEW8 1205 aa12.78□□□□□ -0.36
TTC3-208ENST00000428693 TNIP3Q96KP6 325 aa12.78□□□□□ -0.36
TTC3-208ENST00000428693 KCNK16Q96T55 309 aa12.78□□□□□ -0.36
TTC3-208ENST00000428693 RNF38Q9H0F5 515 aa12.78□□□□□ -0.36
TTC3-208ENST00000428693 GZF1Q9H116 711 aaPredicted RBP12.78□□□□□ -0.36
TTC3-208ENST00000428693 XYLT2Q9H1B5 865 aa12.78□□□□□ -0.36
TTC3-208ENST00000428693 SEMA4GQ9NTN9 838 aa12.78□□□□□ -0.36
TTC3-208ENST00000428693 CFAP97Q9P2B7 532 aa12.78□□□□□ -0.36
TTC3-208ENST00000428693 CHORDC1Q9UHD1 332 aaPredicted RBP12.78□□□□□ -0.36
TTC3-208ENST00000428693 USP25Q9UHP3 1055 aa12.78□□□□□ -0.36
TTC3-208ENST00000428693 CIZ1Q9ULV3 898 aaPredicted RBP12.78□□□□□ -0.36
TTC3-208ENST00000428693 GREB1Q4ZG55 1949 aa12.78□□□□□ -0.36
TTC3-208ENST00000428693 AP1G2O75843 785 aa12.77□□□□□ -0.37
TTC3-208ENST00000428693 RTN3O95197 1032 aaPredicted RBP12.77□□□□□ -0.37
TTC3-208ENST00000428693 KIF20AO95235 890 aa12.77□□□□□ -0.37
TTC3-208ENST00000428693 FAM163BP0C2L3 166 aa12.77□□□□□ -0.37
TTC3-208ENST00000428693 PRR29P0C7W0 189 aa12.77□□□□□ -0.37
TTC3-208ENST00000428693 NDUFA8P51970 172 aa12.77□□□□□ -0.37
TTC3-208ENST00000428693 ATXN1P54253 815 aaKnown RBP12.77□□□□□ -0.37
TTC3-208ENST00000428693 SGSM1Q2NKQ1 1148 aa12.77□□□□□ -0.37
TTC3-208ENST00000428693 FBXO43Q4G163 708 aa12.77□□□□□ -0.37
TTC3-208ENST00000428693 CACNA2D4Q7Z3S7 1137 aa12.77□□□□□ -0.37
TTC3-208ENST00000428693 FAM35AQ86V20 835 aa12.77□□□□□ -0.37
TTC3-208ENST00000428693 JAKMIP2Q96AA8 810 aa12.77□□□□□ -0.37
TTC3-208ENST00000428693 ACDQ96AP0 544 aa12.77□□□□□ -0.37
TTC3-208ENST00000428693 CEP295NLQ96MC4 621 aa12.77□□□□□ -0.37
TTC3-208ENST00000428693 ARRDC1-AS1Q9H2J1 176 aa12.77□□□□□ -0.37
TTC3-208ENST00000428693 KRT82Q9NSB4 513 aa12.77□□□□□ -0.37
TTC3-208ENST00000428693 TMEM30AQ9NV96 361 aa12.77□□□□□ -0.37
TTC3-208ENST00000428693 DLL3Q9NYJ7 618 aa12.77□□□□□ -0.37
TTC3-208ENST00000428693 MYH10P35580 1976 aa12.77□□□□□ -0.37
TTC3-208ENST00000428693 PTPRDP23468 1912 aa12.76□□□□□ -0.37
TTC3-208ENST00000428693 PDXKO00764 312 aa12.76□□□□□ -0.37
TTC3-208ENST00000428693 SLC9A3R1O14745 358 aaPredicted RBP12.76□□□□□ -0.37
TTC3-208ENST00000428693 VNN1O95497 513 aa12.76□□□□□ -0.37
TTC3-208ENST00000428693 STAU1O95793 577 aaKnown RBP12.76□□□□□ -0.37
TTC3-208ENST00000428693 C4BPAP04003 597 aaKnown RBP12.76□□□□□ -0.37
TTC3-208ENST00000428693 IRF1P10914 325 aa12.76□□□□□ -0.37
TTC3-208ENST00000428693 KRT13P13646 458 aa12.76□□□□□ -0.37
TTC3-208ENST00000428693 CCDC130P13994 396 aa12.76□□□□□ -0.37
TTC3-208ENST00000428693 TRIM21P19474 475 aaKnown RBP12.76□□□□□ -0.37
TTC3-208ENST00000428693 ADORA2BP29275 332 aa12.76□□□□□ -0.37
TTC3-208ENST00000428693 GBP1P32455 592 aa12.76□□□□□ -0.37
TTC3-208ENST00000428693 DGKEP52429 567 aa12.76□□□□□ -0.37
TTC3-208ENST00000428693 NDST1P52848 882 aa12.76□□□□□ -0.37
TTC3-208ENST00000428693 ZXDBP98169 803 aa12.76□□□□□ -0.37
TTC3-208ENST00000428693 DMC1Q14565 340 aa12.76□□□□□ -0.37
TTC3-208ENST00000428693 AASDHQ4L235 1098 aaPredicted RBP12.76□□□□□ -0.37
TTC3-208ENST00000428693 SPOPLQ6IQ16 392 aa12.76□□□□□ -0.37
TTC3-208ENST00000428693 PRR23CQ6ZRP0 262 aa12.76□□□□□ -0.37
TTC3-208ENST00000428693 KBTBD6Q86V97 674 aa12.76□□□□□ -0.37
TTC3-208ENST00000428693 CCDC33Q8N5R6 958 aa12.76□□□□□ -0.37
TTC3-208ENST00000428693 C12orf50Q8NA57 414 aaPredicted RBP12.76□□□□□ -0.37
TTC3-208ENST00000428693 SCAMP5Q8TAC9 235 aa12.76□□□□□ -0.37
TTC3-208ENST00000428693 GAB3Q8WWW8 586 aa12.76□□□□□ -0.37
TTC3-208ENST00000428693 SMARCD1Q96GM5 515 aa12.76□□□□□ -0.37
TTC3-208ENST00000428693 TTLL2Q9BWV7 592 aa12.76□□□□□ -0.37
TTC3-208ENST00000428693 IMPG2Q9BZV3 1241 aa12.76□□□□□ -0.37
TTC3-208ENST00000428693 SDCBP2Q9H190 292 aa12.76□□□□□ -0.37
TTC3-208ENST00000428693 KCTD10Q9H3F6 313 aa12.76□□□□□ -0.37
TTC3-208ENST00000428693 DMAP1Q9NPF5 467 aaPredicted RBP12.76□□□□□ -0.37
TTC3-208ENST00000428693 FAM49BQ9NUQ9 324 aa12.76□□□□□ -0.37
TTC3-208ENST00000428693 INVSQ9Y283 1065 aa12.76□□□□□ -0.37
TTC3-208ENST00000428693 SH3BP1Q9Y3L3 701 aa12.76□□□□□ -0.37
TTC3-208ENST00000428693 ATP6V1DQ9Y5K8 247 aa12.76□□□□□ -0.37
TTC3-208ENST00000428693 CACNA1AO00555 2505 aa12.76□□□□□ -0.37
TTC3-208ENST00000428693 GDF9O60383 454 aa12.75□□□□□ -0.37
TTC3-208ENST00000428693 APBB3O95704 486 aa12.75□□□□□ -0.37
TTC3-208ENST00000428693 HLA-DRAP01903 254 aa12.75□□□□□ -0.37
TTC3-208ENST00000428693 TRIM49P0CI25 452 aa12.75□□□□□ -0.37
TTC3-208ENST00000428693 TRIM49CP0CI26 452 aa12.75□□□□□ -0.37
TTC3-208ENST00000428693 PFKLP17858 780 aa12.75□□□□□ -0.37
TTC3-208ENST00000428693 TGM1P22735 817 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 129.5 ms