RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 CCDC130P13994 396 aa9.86□□□□□ -0.83
NUP50-206ENST00000422489 CD44P16070 742 aaKnown RBP9.86□□□□□ -0.83
NUP50-206ENST00000422489 CD58P19256 250 aa9.86□□□□□ -0.83
NUP50-206ENST00000422489 TRIM21P19474 475 aaKnown RBP9.86□□□□□ -0.83
NUP50-206ENST00000422489 ADORA2BP29275 332 aa9.86□□□□□ -0.83
NUP50-206ENST00000422489 HOXC13P31276 330 aa9.86□□□□□ -0.83
NUP50-206ENST00000422489 GJA4P35212 333 aa9.86□□□□□ -0.83
NUP50-206ENST00000422489 PXNP49023 591 aaPredicted RBP9.86□□□□□ -0.83
NUP50-206ENST00000422489 MAP3K7CLP57077 242 aa9.86□□□□□ -0.83
NUP50-206ENST00000422489 PPP3CAQ08209 521 aa9.86□□□□□ -0.83
NUP50-206ENST00000422489 SRSF5Q13243 272 aaKnown RBP9.86□□□□□ -0.83
NUP50-206ENST00000422489 CCINQ13939 588 aa9.86□□□□□ -0.83
NUP50-206ENST00000422489 SIM2Q14190 667 aaPredicted RBP9.86□□□□□ -0.83
NUP50-206ENST00000422489 ZNF77Q15935 545 aa9.86□□□□□ -0.83
NUP50-206ENST00000422489 TMEM196Q5HYL7 178 aa9.86□□□□□ -0.83
NUP50-206ENST00000422489 NAIF1Q69YI7 327 aaPredicted RBP9.86□□□□□ -0.83
NUP50-206ENST00000422489 ISM2Q6H9L7 571 aa9.86□□□□□ -0.83
NUP50-206ENST00000422489 PAQR9Q6ZVX9 377 aa9.86□□□□□ -0.83
NUP50-206ENST00000422489 INTS8Q75QN2 995 aaKnown RBP9.86□□□□□ -0.83
NUP50-206ENST00000422489 CEP68Q76N32 757 aa9.86□□□□□ -0.83
NUP50-206ENST00000422489 FAM35AQ86V20 835 aa9.86□□□□□ -0.83
NUP50-206ENST00000422489 C12orf29Q8N999 325 aa9.86□□□□□ -0.83
NUP50-206ENST00000422489 CCDC150Q8NCX0 1101 aa9.86□□□□□ -0.83
NUP50-206ENST00000422489 SLC2A14Q8TDB8 520 aa9.86□□□□□ -0.83
NUP50-206ENST00000422489 TMEM174Q8WUU8 243 aa9.86□□□□□ -0.83
NUP50-206ENST00000422489 NELL1Q92832 810 aa9.86□□□□□ -0.83
NUP50-206ENST00000422489 ATP2A3Q93084 1043 aa9.86□□□□□ -0.83
NUP50-206ENST00000422489 JAKMIP2Q96AA8 810 aa9.86□□□□□ -0.83
NUP50-206ENST00000422489 TTLL2Q9BWV7 592 aa9.86□□□□□ -0.83
NUP50-206ENST00000422489 IMPG2Q9BZV3 1241 aa9.86□□□□□ -0.83
NUP50-206ENST00000422489 NACA2Q9H009 215 aa9.86□□□□□ -0.83
NUP50-206ENST00000422489 DMAP1Q9NPF5 467 aaPredicted RBP9.86□□□□□ -0.83
NUP50-206ENST00000422489 FAM49BQ9NUQ9 324 aa9.86□□□□□ -0.83
NUP50-206ENST00000422489 TMEM30AQ9NV96 361 aa9.86□□□□□ -0.83
NUP50-206ENST00000422489 RMND1Q9NWS8 449 aa9.86□□□□□ -0.83
NUP50-206ENST00000422489 C2orf42Q9NWW7 574 aa9.86□□□□□ -0.83
NUP50-206ENST00000422489 CFAP97Q9P2B7 532 aa9.86□□□□□ -0.83
NUP50-206ENST00000422489 ARHGAP26Q9UNA1 814 aa9.86□□□□□ -0.83
NUP50-206ENST00000422489 SMG5Q9UPR3 1016 aaKnown RBP9.86□□□□□ -0.83
NUP50-206ENST00000422489 MAPK13O15264 365 aa9.85□□□□□ -0.83
NUP50-206ENST00000422489 RNF40O75150 1001 aa9.85□□□□□ -0.83
NUP50-206ENST00000422489 SMC2O95347 1197 aa9.85□□□□□ -0.83
NUP50-206ENST00000422489 NFATC1O95644 943 aa9.85□□□□□ -0.83
NUP50-206ENST00000422489 ASS1P00966 412 aaKnown RBP9.85□□□□□ -0.83
NUP50-206ENST00000422489 TDGF1P13385 188 aa9.85□□□□□ -0.83
NUP50-206ENST00000422489 DRD1P21728 446 aa9.85□□□□□ -0.83
NUP50-206ENST00000422489 ZXDBP98169 803 aa9.85□□□□□ -0.83
NUP50-206ENST00000422489 USP4Q13107 963 aa9.85□□□□□ -0.83
NUP50-206ENST00000422489 EML3Q32P44 896 aa9.85□□□□□ -0.83
NUP50-206ENST00000422489 HECTD3Q5T447 861 aa9.85□□□□□ -0.83
NUP50-206ENST00000422489 PKN3Q6P5Z2 889 aa9.85□□□□□ -0.83
NUP50-206ENST00000422489 FILIP1Q7Z7B0 1213 aa9.85□□□□□ -0.83
NUP50-206ENST00000422489 LONP2Q86WA8 852 aa9.85□□□□□ -0.83
NUP50-206ENST00000422489 UNC93AQ86WB7 457 aa9.85□□□□□ -0.83
NUP50-206ENST00000422489 FUKQ8N0W3 1084 aa9.85□□□□□ -0.83
NUP50-206ENST00000422489 FMR1NBQ8N0W7 255 aaPredicted RBP9.85□□□□□ -0.83
NUP50-206ENST00000422489 CRYBG2Q8N1P7 616 aa9.85□□□□□ -0.83
NUP50-206ENST00000422489 PDZD8Q8NEN9 1154 aa9.85□□□□□ -0.83
NUP50-206ENST00000422489 TAS1R2Q8TE23 839 aa9.85□□□□□ -0.83
NUP50-206ENST00000422489 ERCC4Q92889 916 aaPredicted RBP9.85□□□□□ -0.83
NUP50-206ENST00000422489 CD101Q93033 1021 aa9.85□□□□□ -0.83
NUP50-206ENST00000422489 SMARCD1Q96GM5 515 aa9.85□□□□□ -0.83
NUP50-206ENST00000422489 TSG101Q99816 390 aa9.85□□□□□ -0.83
NUP50-206ENST00000422489 SMOQ99835 787 aa9.85□□□□□ -0.83
NUP50-206ENST00000422489 EPC1Q9H2F5 836 aa9.85□□□□□ -0.83
NUP50-206ENST00000422489 POLR3BQ9NW08 1133 aaPredicted RBP9.85□□□□□ -0.83
NUP50-206ENST00000422489 HMGXB4Q9UGU5 601 aa9.85□□□□□ -0.83
NUP50-206ENST00000422489 GMEB2Q9UKD1 530 aa9.85□□□□□ -0.83
NUP50-206ENST00000422489 K7ESF4 209 aa9.84□□□□□ -0.83
NUP50-206ENST00000422489 SLC9A3R1O14745 358 aaPredicted RBP9.84□□□□□ -0.83
NUP50-206ENST00000422489 TNFRSF10BO14763 440 aa9.84□□□□□ -0.83
NUP50-206ENST00000422489 STX10O60499 249 aa9.84□□□□□ -0.83
NUP50-206ENST00000422489 BEST1O76090 585 aa9.84□□□□□ -0.83
NUP50-206ENST00000422489 FAM200BP0CF97 657 aa9.84□□□□□ -0.83
NUP50-206ENST00000422489 PFKLP17858 780 aa9.84□□□□□ -0.83
NUP50-206ENST00000422489 PRCPP42785 496 aa9.84□□□□□ -0.83
NUP50-206ENST00000422489 ASPAP45381 313 aa9.84□□□□□ -0.83
NUP50-206ENST00000422489 SLC6A11P48066 632 aa9.84□□□□□ -0.83
NUP50-206ENST00000422489 SLC5A3P53794 718 aa9.84□□□□□ -0.83
NUP50-206ENST00000422489 SEC13P55735 322 aa9.84□□□□□ -0.83
NUP50-206ENST00000422489 SLC7A9P82251 487 aa9.84□□□□□ -0.83
NUP50-206ENST00000422489 NFIL3Q16649 462 aa9.84□□□□□ -0.83
NUP50-206ENST00000422489 ZNF394Q53GI3 561 aa9.84□□□□□ -0.83
NUP50-206ENST00000422489 TCERG1LQ5VWI1 586 aa9.84□□□□□ -0.83
NUP50-206ENST00000422489 KRT39Q6A163 491 aa9.84□□□□□ -0.83
NUP50-206ENST00000422489 ANKRD40Q6AI12 368 aa9.84□□□□□ -0.83
NUP50-206ENST00000422489 ADGRG2Q8IZP9 1017 aa9.84□□□□□ -0.83
NUP50-206ENST00000422489 SMARCE1Q969G3 411 aa9.84□□□□□ -0.83
NUP50-206ENST00000422489 CYFIP2Q96F07 1278 aa9.84□□□□□ -0.83
NUP50-206ENST00000422489 HEXIM2Q96MH2 286 aaKnown RBP9.84□□□□□ -0.83
NUP50-206ENST00000422489 TWNKQ96RR1 684 aa9.84□□□□□ -0.83
NUP50-206ENST00000422489 NT5C1AQ9BXI3 368 aa9.84□□□□□ -0.83
NUP50-206ENST00000422489 DNAI2Q9GZS0 605 aa9.84□□□□□ -0.83
NUP50-206ENST00000422489 CCSER2Q9H7U1 834 aa9.84□□□□□ -0.83
NUP50-206ENST00000422489 CYP3A43Q9HB55 503 aa9.84□□□□□ -0.83
NUP50-206ENST00000422489 APOBEC3GQ9HC16 384 aaKnown RBP9.84□□□□□ -0.83
NUP50-206ENST00000422489 TMEM8AQ9HCN3 771 aa9.84□□□□□ -0.83
NUP50-206ENST00000422489 KRT82Q9NSB4 513 aa9.84□□□□□ -0.83
NUP50-206ENST00000422489 GMIPQ9P107 970 aa9.84□□□□□ -0.83
NUP50-206ENST00000422489 HOOK1Q9UJC3 728 aaKnown RBP9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms