RNA–Protein interactions for RNA: ENST00000401959.5

SNU13-203, Transcript of small nuclear ribonucleoprotein 13, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNU13, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-203ENST00000401959 KRT10P13645 584 aa13.71□□□□□ -0.21
SNU13-203ENST00000401959 IL1R2P27930 398 aa13.71□□□□□ -0.21
SNU13-203ENST00000401959 SDC4P31431 198 aa13.71□□□□□ -0.21
SNU13-203ENST00000401959 UPP1Q16831 310 aa13.71□□□□□ -0.21
SNU13-203ENST00000401959 SPDYCQ5MJ68 293 aa13.71□□□□□ -0.21
SNU13-203ENST00000401959 DRICH1Q6PGQ1 229 aaPredicted RBP13.71□□□□□ -0.21
SNU13-203ENST00000401959 ARCQ7LC44 396 aa13.71□□□□□ -0.21
SNU13-203ENST00000401959 ANKS1BQ7Z6G8 1248 aa13.71□□□□□ -0.21
SNU13-203ENST00000401959 IQCKQ8N0W5 287 aa13.71□□□□□ -0.21
SNU13-203ENST00000401959 DUSP16Q9BY84 665 aa13.71□□□□□ -0.21
SNU13-203ENST00000401959 FRMD8P1Q9BZ68 369 aaPredicted RBP13.71□□□□□ -0.21
SNU13-203ENST00000401959 TRPV6Q9H1D0 765 aa13.71□□□□□ -0.21
SNU13-203ENST00000401959 DDX43Q9NXZ2 648 aaKnown RBP13.71□□□□□ -0.21
SNU13-203ENST00000401959 GRHL1Q9NZI5 618 aa13.71□□□□□ -0.21
SNU13-203ENST00000401959 WHRNQ9P202 907 aa13.71□□□□□ -0.21
SNU13-203ENST00000401959 USP18Q9UMW8 372 aa13.71□□□□□ -0.21
SNU13-203ENST00000401959 TSC2P49815 1807 aa13.7□□□□□ -0.22
SNU13-203ENST00000401959 CASTOR2A6NHX0 329 aa13.7□□□□□ -0.22
SNU13-203ENST00000401959 C3orf70A6NLC5 250 aaPredicted RBP13.7□□□□□ -0.22
SNU13-203ENST00000401959 ARVCFO00192 962 aa13.7□□□□□ -0.22
SNU13-203ENST00000401959 INPPL1O15357 1258 aa13.7□□□□□ -0.22
SNU13-203ENST00000401959 MYCP01106 439 aaPredicted RBP13.7□□□□□ -0.22
SNU13-203ENST00000401959 KDELR1P24390 212 aa13.7□□□□□ -0.22
SNU13-203ENST00000401959 FLT3P36888 993 aa13.7□□□□□ -0.22
SNU13-203ENST00000401959 AFF1P51825 1210 aaKnown RBP13.7□□□□□ -0.22
SNU13-203ENST00000401959 PLTPP55058 493 aa13.7□□□□□ -0.22
SNU13-203ENST00000401959 CALCOCO2Q13137 446 aa13.7□□□□□ -0.22
SNU13-203ENST00000401959 TUSC3Q13454 348 aa13.7□□□□□ -0.22
SNU13-203ENST00000401959 TAZQ16635 292 aa13.7□□□□□ -0.22
SNU13-203ENST00000401959 TRNP1Q6NT89 227 aa13.7□□□□□ -0.22
SNU13-203ENST00000401959 ZDHHC24Q6UX98 284 aa13.7□□□□□ -0.22
SNU13-203ENST00000401959 LRIG3Q6UXM1 1119 aa13.7□□□□□ -0.22
SNU13-203ENST00000401959 SLC26A9Q7LBE3 791 aa13.7□□□□□ -0.22
SNU13-203ENST00000401959 TMC3Q7Z5M5 1100 aa13.7□□□□□ -0.22
SNU13-203ENST00000401959 SCUBE3Q8IX30 993 aa13.7□□□□□ -0.22
SNU13-203ENST00000401959 TTC13Q8NBP0 860 aa13.7□□□□□ -0.22
SNU13-203ENST00000401959 KCTD6Q8NC69 237 aa13.7□□□□□ -0.22
SNU13-203ENST00000401959 CMASQ8NFW8 434 aaPredicted RBP13.7□□□□□ -0.22
SNU13-203ENST00000401959 ACSF2Q96CM8 615 aaPredicted RBP13.7□□□□□ -0.22
SNU13-203ENST00000401959 PIWIL1Q96J94 861 aaKnown RBP13.7□□□□□ -0.22
SNU13-203ENST00000401959 ZIM3Q96PE6 472 aa13.7□□□□□ -0.22
SNU13-203ENST00000401959 SH3GL2Q99962 352 aa13.7□□□□□ -0.22
SNU13-203ENST00000401959 RGS18Q9NS28 235 aa13.7□□□□□ -0.22
SNU13-203ENST00000401959 ASIC3Q9UHC3 531 aa13.7□□□□□ -0.22
SNU13-203ENST00000401959 PCSK1NQ9UHG2 260 aa13.7□□□□□ -0.22
SNU13-203ENST00000401959 ARHGEF37A1IGU5 675 aa13.69□□□□□ -0.22
SNU13-203ENST00000401959 GOLGA8KD6RF30 607 aa13.69□□□□□ -0.22
SNU13-203ENST00000401959 LIASO43766 372 aa13.69□□□□□ -0.22
SNU13-203ENST00000401959 PRPSAP2O60256 369 aa13.69□□□□□ -0.22
SNU13-203ENST00000401959 PPFIA2O75334 1257 aa13.69□□□□□ -0.22
SNU13-203ENST00000401959 GRAP2O75791 330 aa13.69□□□□□ -0.22
SNU13-203ENST00000401959 GABBR2O75899 941 aa13.69□□□□□ -0.22
SNU13-203ENST00000401959 EOMESO95936 686 aa13.69□□□□□ -0.22
SNU13-203ENST00000401959 ODC1P11926 461 aa13.69□□□□□ -0.22
SNU13-203ENST00000401959 NPR3P17342 541 aa13.69□□□□□ -0.22
SNU13-203ENST00000401959 ITIH2P19823 946 aa13.69□□□□□ -0.22
SNU13-203ENST00000401959 TKTP29401 623 aaKnown RBP13.69□□□□□ -0.22
SNU13-203ENST00000401959 HSD17B3P37058 310 aa13.69□□□□□ -0.22
SNU13-203ENST00000401959 PTPN9P43378 593 aa13.69□□□□□ -0.22
SNU13-203ENST00000401959 PLCB3Q01970 1234 aa13.69□□□□□ -0.22
SNU13-203ENST00000401959 DHX9Q08211 1270 aaKnown RBP13.69□□□□□ -0.22
SNU13-203ENST00000401959 SMTNL2Q2TAL5 461 aa13.69□□□□□ -0.22
SNU13-203ENST00000401959 CCDC14Q49A88 953 aa13.69□□□□□ -0.22
SNU13-203ENST00000401959 EFHC1Q5JVL4 640 aa13.69□□□□□ -0.22
SNU13-203ENST00000401959 TRAF7Q6Q0C0 670 aa13.69□□□□□ -0.22
SNU13-203ENST00000401959 ZNF365Q70YC5 407 aa13.69□□□□□ -0.22
SNU13-203ENST00000401959 ZNF598Q86UK7 904 aaKnown RBP13.69□□□□□ -0.22
SNU13-203ENST00000401959 METTL23Q86XA0 190 aa13.69□□□□□ -0.22
SNU13-203ENST00000401959 FUKQ8N0W3 1084 aa13.69□□□□□ -0.22
SNU13-203ENST00000401959 BBOF1Q8ND07 529 aa13.69□□□□□ -0.22
SNU13-203ENST00000401959 CCHCR1Q8TD31 782 aa13.69□□□□□ -0.22
SNU13-203ENST00000401959 KHSRPQ92945 711 aaKnown RBP eCLIP13.69□□□□□ -0.22
SNU13-203ENST00000401959 ART4Q93070 314 aa13.69□□□□□ -0.22
SNU13-203ENST00000401959 SNF8Q96H20 258 aa13.69□□□□□ -0.22
SNU13-203ENST00000401959 SYT15Q9BQS2 421 aa13.69□□□□□ -0.22
SNU13-203ENST00000401959 MED10Q9BTT4 135 aa13.69□□□□□ -0.22
SNU13-203ENST00000401959 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.69□□□□□ -0.22
SNU13-203ENST00000401959 CACNG4Q9UBN1 327 aa13.69□□□□□ -0.22
SNU13-203ENST00000401959 CDH9Q9ULB4 789 aa13.69□□□□□ -0.22
SNU13-203ENST00000401959 DRG1Q9Y295 367 aaKnown RBP13.69□□□□□ -0.22
SNU13-203ENST00000401959 MYO1CO00159 1063 aa13.69□□□□□ -0.22
SNU13-203ENST00000401959 RNF40O75150 1001 aa13.69□□□□□ -0.22
SNU13-203ENST00000401959 ATP2C2O75185 946 aa13.69□□□□□ -0.22
SNU13-203ENST00000401959 POMCP01189 267 aa13.69□□□□□ -0.22
SNU13-203ENST00000401959 LCP1P13796 627 aa13.69□□□□□ -0.22
SNU13-203ENST00000401959 ATF2P15336 505 aa13.69□□□□□ -0.22
SNU13-203ENST00000401959 ACAT1P24752 427 aaKnown RBP13.69□□□□□ -0.22
SNU13-203ENST00000401959 PCSK1P29120 753 aa13.69□□□□□ -0.22
SNU13-203ENST00000401959 CAV1Q03135 178 aa13.69□□□□□ -0.22
SNU13-203ENST00000401959 BYSLQ13895 437 aaKnown RBP13.69□□□□□ -0.22
SNU13-203ENST00000401959 C15orf59Q2T9L4 293 aaPredicted RBP13.69□□□□□ -0.22
SNU13-203ENST00000401959 BOLA3Q53S33 107 aa13.69□□□□□ -0.22
SNU13-203ENST00000401959 MDH1BQ5I0G3 518 aa13.69□□□□□ -0.22
SNU13-203ENST00000401959 KCNT1Q5JUK3 1230 aa13.69□□□□□ -0.22
SNU13-203ENST00000401959 BBS12Q6ZW61 710 aa13.69□□□□□ -0.22
SNU13-203ENST00000401959 SRLQ86TD4 932 aa13.69□□□□□ -0.22
SNU13-203ENST00000401959 CCDC89Q8N998 374 aa13.69□□□□□ -0.22
SNU13-203ENST00000401959 C3orf58Q8NDZ4 430 aa13.69□□□□□ -0.22
SNU13-203ENST00000401959 FBXO25Q8TCJ0 367 aa13.69□□□□□ -0.22
SNU13-203ENST00000401959 TEKT4Q8WW24 435 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms