RNA–Protein interactions for RNA: ENST00000399352.5

ITSN1-209, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 5,408 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-209ENST00000399352 NSUN4Q96CB9 384 aaKnown RBP16.66■□□□□ 0.26
ITSN1-209ENST00000399352 LRRC39Q96DD0 335 aa16.66■□□□□ 0.26
ITSN1-209ENST00000399352 GPR63Q9BZJ6 419 aa16.66■□□□□ 0.26
ITSN1-209ENST00000399352 MUC3BQ9H195 1237 aa16.66■□□□□ 0.26
ITSN1-209ENST00000399352 IARS2Q9NSE4 1012 aaKnown RBP16.66■□□□□ 0.26
ITSN1-209ENST00000399352 ETAA1Q9NY74 926 aa16.66■□□□□ 0.26
ITSN1-209ENST00000399352 RNF112Q9ULX5 631 aa16.66■□□□□ 0.26
ITSN1-209ENST00000399352 CHKBQ9Y259 395 aa16.66■□□□□ 0.26
ITSN1-209ENST00000399352 SNPHO15079 494 aa16.66■□□□□ 0.26
ITSN1-209ENST00000399352 RPS7P62081 194 aaKnown RBP16.66■□□□□ 0.26
ITSN1-209ENST00000399352 EMC2Q15006 297 aa16.66■□□□□ 0.26
ITSN1-209ENST00000399352 TBC1D19Q8N5T2 526 aa16.66■□□□□ 0.26
ITSN1-209ENST00000399352 KYQ8NBH2 561 aa16.66■□□□□ 0.26
ITSN1-209ENST00000399352 STK32AQ8WU08 396 aa16.66■□□□□ 0.26
ITSN1-209ENST00000399352 KCND2Q9NZV8 630 aa16.66■□□□□ 0.26
ITSN1-209ENST00000399352 COPG2Q9UBF2 871 aa16.66■□□□□ 0.26
ITSN1-209ENST00000399352 HEATR9A2RTY3 570 aa16.65■□□□□ 0.26
ITSN1-209ENST00000399352 TBX3O15119 743 aa16.65■□□□□ 0.26
ITSN1-209ENST00000399352 CPA3P15088 417 aa16.65■□□□□ 0.26
ITSN1-209ENST00000399352 FDFT1P37268 417 aa16.65■□□□□ 0.26
ITSN1-209ENST00000399352 DGKDQ16760 1214 aa16.65■□□□□ 0.26
ITSN1-209ENST00000399352 MYLK2Q9H1R3 596 aa16.65■□□□□ 0.26
ITSN1-209ENST00000399352 ARHGEF3Q9NR81 526 aa16.65■□□□□ 0.26
ITSN1-209ENST00000399352 CFAP99D6REC4 459 aa16.65■□□□□ 0.26
ITSN1-209ENST00000399352 H2AFYO75367 372 aaKnown RBP16.65■□□□□ 0.26
ITSN1-209ENST00000399352 ALOX12P18054 663 aa16.65■□□□□ 0.26
ITSN1-209ENST00000399352 IFI35P80217 286 aaPredicted RBP16.65■□□□□ 0.26
ITSN1-209ENST00000399352 SPIRE2Q8WWL2 714 aa16.65■□□□□ 0.26
ITSN1-209ENST00000399352 UNKQ9C0B0 810 aaKnown RBP16.65■□□□□ 0.26
ITSN1-209ENST00000399352 TRPC7Q9HCX4 862 aa16.65■□□□□ 0.26
ITSN1-209ENST00000399352 C2CD2Q9Y426 696 aa16.65■□□□□ 0.26
ITSN1-209ENST00000399352 CNTNAP5Q8WYK1 1306 aa16.65■□□□□ 0.26
ITSN1-209ENST00000399352 USP42Q9H9J4 1324 aaKnown RBP16.65■□□□□ 0.26
ITSN1-209ENST00000399352 GOLGA8TH3BQL2 631 aa16.65■□□□□ 0.26
ITSN1-209ENST00000399352 TNPO2O14787 897 aaKnown RBP16.65■□□□□ 0.26
ITSN1-209ENST00000399352 CLOCKO15516 846 aa16.65■□□□□ 0.26
ITSN1-209ENST00000399352 IRGCQ6NXR0 463 aa16.65■□□□□ 0.26
ITSN1-209ENST00000399352 UBASH3BQ8TF42 649 aa16.65■□□□□ 0.26
ITSN1-209ENST00000399352 KAT2BQ92831 832 aa16.65■□□□□ 0.26
ITSN1-209ENST00000399352 GRIP2Q9C0E4 1043 aa16.65■□□□□ 0.26
ITSN1-209ENST00000399352 AGPAT3Q9NRZ7 376 aa16.65■□□□□ 0.26
ITSN1-209ENST00000399352 ARHGAP20Q9P2F6 1191 aa16.65■□□□□ 0.26
ITSN1-209ENST00000399352 NPEPPSP55786 919 aa16.65■□□□□ 0.26
ITSN1-209ENST00000399352 VAC14Q08AM6 782 aa16.65■□□□□ 0.26
ITSN1-209ENST00000399352 CDC16Q13042 620 aa16.65■□□□□ 0.26
ITSN1-209ENST00000399352 UNC45BQ8IWX7 931 aa16.65■□□□□ 0.26
ITSN1-209ENST00000399352 ZSWIM2Q8NEG5 633 aa16.65■□□□□ 0.26
ITSN1-209ENST00000399352 ST13P5Q8NFI4 369 aaPredicted RBP16.65■□□□□ 0.26
ITSN1-209ENST00000399352 HDHD2Q9H0R4 259 aa16.65■□□□□ 0.26
ITSN1-209ENST00000399352 RAD21L1Q9H4I0 556 aa16.65■□□□□ 0.26
ITSN1-209ENST00000399352 KLHL31Q9H511 634 aa16.65■□□□□ 0.26
ITSN1-209ENST00000399352 SDR42E2A6NKP2 422 aa16.64■□□□□ 0.26
ITSN1-209ENST00000399352 TM9SF1O15321 606 aa16.64■□□□□ 0.26
ITSN1-209ENST00000399352 RIPK2O43353 540 aa16.64■□□□□ 0.26
ITSN1-209ENST00000399352 FASP25445 335 aa16.64■□□□□ 0.26
ITSN1-209ENST00000399352 RAD23AP54725 363 aa16.64■□□□□ 0.26
ITSN1-209ENST00000399352 ZNF844Q08AG5 666 aa16.64■□□□□ 0.26
ITSN1-209ENST00000399352 BOLA3Q53S33 107 aa16.64■□□□□ 0.26
ITSN1-209ENST00000399352 DGKKQ5KSL6 1271 aa16.64■□□□□ 0.26
ITSN1-209ENST00000399352 RIPOR1Q6ZS17 1223 aa16.64■□□□□ 0.26
ITSN1-209ENST00000399352 UXS1Q8NBZ7 420 aa16.64■□□□□ 0.26
ITSN1-209ENST00000399352 BLOC1S5Q8TDH9 187 aa16.64■□□□□ 0.26
ITSN1-209ENST00000399352 CATSPERBQ9H7T0 1116 aa16.64■□□□□ 0.26
ITSN1-209ENST00000399352 TRMT6Q9UJA5 497 aaKnown RBP16.64■□□□□ 0.26
ITSN1-209ENST00000399352 TAF4O00268 1085 aa16.64■□□□□ 0.25
ITSN1-209ENST00000399352 TRIM13O60858 407 aa16.64■□□□□ 0.25
ITSN1-209ENST00000399352 TFRCP02786 760 aaKnown RBP16.64■□□□□ 0.25
ITSN1-209ENST00000399352 RPA1P27694 616 aa16.64■□□□□ 0.25
ITSN1-209ENST00000399352 PSMC6P62333 389 aa16.64■□□□□ 0.25
ITSN1-209ENST00000399352 ELF3P78545 371 aaPredicted RBP16.64■□□□□ 0.25
ITSN1-209ENST00000399352 ORC1Q13415 861 aa16.64■□□□□ 0.25
ITSN1-209ENST00000399352 VEPH1Q14D04 833 aa16.64■□□□□ 0.25
ITSN1-209ENST00000399352 NFIL3Q16649 462 aa16.64■□□□□ 0.25
ITSN1-209ENST00000399352 TYW3Q6IPR3 259 aaKnown RBP16.64■□□□□ 0.25
ITSN1-209ENST00000399352 STRA8Q7Z7C7 330 aa16.64■□□□□ 0.25
ITSN1-209ENST00000399352 ELOA2Q8IYF1 753 aaPredicted RBP16.64■□□□□ 0.25
ITSN1-209ENST00000399352 LRRC71Q8N4P6 559 aa16.64■□□□□ 0.25
ITSN1-209ENST00000399352 MASTLQ96GX5 879 aa16.64■□□□□ 0.25
ITSN1-209ENST00000399352 DEPDC7Q96QD5 511 aa16.64■□□□□ 0.25
ITSN1-209ENST00000399352 MMP19Q99542 508 aa16.64■□□□□ 0.25
ITSN1-209ENST00000399352 APOL2Q9BQE5 337 aa16.64■□□□□ 0.25
ITSN1-209ENST00000399352 RPAP3Q9H6T3 665 aaPredicted RBP16.64■□□□□ 0.25
ITSN1-209ENST00000399352 PRKAG2Q9UGJ0 569 aa16.64■□□□□ 0.25
ITSN1-209ENST00000399352 NCAM1P13591 858 aa16.64■□□□□ 0.25
ITSN1-209ENST00000399352 IL12RB1P42701 662 aa16.64■□□□□ 0.25
ITSN1-209ENST00000399352 GSSP48637 474 aa16.64■□□□□ 0.25
ITSN1-209ENST00000399352 CASP4P49662 377 aa16.64■□□□□ 0.25
ITSN1-209ENST00000399352 TFDP3Q5H9I0 405 aa16.64■□□□□ 0.25
ITSN1-209ENST00000399352 PCNX4Q63HM2 1172 aa16.64■□□□□ 0.25
ITSN1-209ENST00000399352 TRIM63Q969Q1 353 aa16.64■□□□□ 0.25
ITSN1-209ENST00000399352 ZFRQ96KR1 1074 aaKnown RBP16.64■□□□□ 0.25
ITSN1-209ENST00000399352 PRDM4Q9UKN5 801 aa16.64■□□□□ 0.25
ITSN1-209ENST00000399352 UBE2Q2LH0YL09 131 aa16.64■□□□□ 0.25
ITSN1-209ENST00000399352 MTSS1O43312 755 aa16.64■□□□□ 0.25
ITSN1-209ENST00000399352 TIMM44O43615 452 aa16.64■□□□□ 0.25
ITSN1-209ENST00000399352 FAM20BO75063 409 aa16.64■□□□□ 0.25
ITSN1-209ENST00000399352 RRM2P31350 389 aa16.64■□□□□ 0.25
ITSN1-209ENST00000399352 SERPINH1P50454 418 aaKnown RBP16.64■□□□□ 0.25
ITSN1-209ENST00000399352 INAQ16352 499 aa16.64■□□□□ 0.25
ITSN1-209ENST00000399352 TSHZ1Q6ZSZ6 1077 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms