RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 ARHGAP26Q9UNA1 814 aa14.59□□□□□ -0.07
CXCL12-205ENST00000395794 NUP210Q8TEM1 1887 aaPredicted RBP14.59□□□□□ -0.07
CXCL12-205ENST00000395794 ARSAP15289 507 aa14.58□□□□□ -0.08
CXCL12-205ENST00000395794 ASPAP45381 313 aa14.58□□□□□ -0.08
CXCL12-205ENST00000395794 CACNA2D1P54289 1103 aa14.58□□□□□ -0.08
CXCL12-205ENST00000395794 FKBP3Q00688 224 aaKnown RBP14.58□□□□□ -0.08
CXCL12-205ENST00000395794 ZNF77Q15935 545 aa14.58□□□□□ -0.08
CXCL12-205ENST00000395794 COBLL1Q53SF7 1204 aa14.58□□□□□ -0.08
CXCL12-205ENST00000395794 WDR44Q5JSH3 913 aa14.58□□□□□ -0.08
CXCL12-205ENST00000395794 TCERG1LQ5VWI1 586 aa14.58□□□□□ -0.08
CXCL12-205ENST00000395794 CRYBG2Q8N1P7 616 aa14.58□□□□□ -0.08
CXCL12-205ENST00000395794 TTC39CQ8N584 583 aa14.58□□□□□ -0.08
CXCL12-205ENST00000395794 SLC2A14Q8TDB8 520 aa14.58□□□□□ -0.08
CXCL12-205ENST00000395794 OVCA2Q8WZ82 227 aa14.58□□□□□ -0.08
CXCL12-205ENST00000395794 EEF2KMTQ96G04 330 aa14.58□□□□□ -0.08
CXCL12-205ENST00000395794 KCNK16Q96T55 309 aa14.58□□□□□ -0.08
CXCL12-205ENST00000395794 NT5C1AQ9BXI3 368 aa14.58□□□□□ -0.08
CXCL12-205ENST00000395794 HPS4Q9NQG7 708 aa14.58□□□□□ -0.08
CXCL12-205ENST00000395794 KRT82Q9NSB4 513 aa14.58□□□□□ -0.08
CXCL12-205ENST00000395794 RBM12Q9NTZ6 932 aaKnown RBP14.58□□□□□ -0.08
CXCL12-205ENST00000395794 COMMD8Q9NX08 183 aa14.58□□□□□ -0.08
CXCL12-205ENST00000395794 PCDHA5Q9Y5H7 936 aa14.58□□□□□ -0.08
CXCL12-205ENST00000395794 TICRRQ7Z2Z1 1910 aa14.58□□□□□ -0.08
CXCL12-205ENST00000395794 SLC9A3R1O14745 358 aaPredicted RBP14.57□□□□□ -0.08
CXCL12-205ENST00000395794 PSMA7O14818 248 aa14.57□□□□□ -0.08
CXCL12-205ENST00000395794 ATG13O75143 517 aa14.57□□□□□ -0.08
CXCL12-205ENST00000395794 NFATC1O95644 943 aa14.57□□□□□ -0.08
CXCL12-205ENST00000395794 CCDC130P13994 396 aa14.57□□□□□ -0.08
CXCL12-205ENST00000395794 TCF3P15923 654 aa14.57□□□□□ -0.08
CXCL12-205ENST00000395794 CD58P19256 250 aa14.57□□□□□ -0.08
CXCL12-205ENST00000395794 PPP1R2P41236 205 aa14.57□□□□□ -0.08
CXCL12-205ENST00000395794 MXI1P50539 228 aa14.57□□□□□ -0.08
CXCL12-205ENST00000395794 SLC7A9P82251 487 aa14.57□□□□□ -0.08
CXCL12-205ENST00000395794 LRRC63Q05C16 580 aa14.57□□□□□ -0.08
CXCL12-205ENST00000395794 USP4Q13107 963 aa14.57□□□□□ -0.08
CXCL12-205ENST00000395794 ORC1Q13415 861 aa14.57□□□□□ -0.08
CXCL12-205ENST00000395794 DCAF17Q5H9S7 520 aaPredicted RBP14.57□□□□□ -0.08
CXCL12-205ENST00000395794 DDX42Q86XP3 938 aaKnown RBP eCLIP14.57□□□□□ -0.08
CXCL12-205ENST00000395794 FUKQ8N0W3 1084 aa14.57□□□□□ -0.08
CXCL12-205ENST00000395794 FBXL13Q8NEE6 735 aa14.57□□□□□ -0.08
CXCL12-205ENST00000395794 SECISBP2LQ93073 1101 aaKnown RBP14.57□□□□□ -0.08
CXCL12-205ENST00000395794 NACA2Q9H009 215 aa14.57□□□□□ -0.08
CXCL12-205ENST00000395794 FBXO44Q9H4M3 255 aa14.57□□□□□ -0.08
CXCL12-205ENST00000395794 ECT2Q9H8V3 914 aa14.57□□□□□ -0.08
CXCL12-205ENST00000395794 FAM49BQ9NUQ9 324 aa14.57□□□□□ -0.08
CXCL12-205ENST00000395794 WNT6Q9Y6F9 365 aa14.57□□□□□ -0.08
CXCL12-205ENST00000395794 USP34Q70CQ2 3546 aa14.56□□□□□ -0.08
CXCL12-205ENST00000395794 COL4A2P08572 1712 aa14.56□□□□□ -0.08
CXCL12-205ENST00000395794 LEFTY2O00292 366 aa14.56□□□□□ -0.08
CXCL12-205ENST00000395794 TRDMT1O14717 391 aaKnown RBP14.56□□□□□ -0.08
CXCL12-205ENST00000395794 SLC16A3O15427 465 aaKnown RBP14.56□□□□□ -0.08
CXCL12-205ENST00000395794 FAM200BP0CF97 657 aa14.56□□□□□ -0.08
CXCL12-205ENST00000395794 MBL2P11226 248 aaPredicted RBP14.56□□□□□ -0.08
CXCL12-205ENST00000395794 DRD1P21728 446 aa14.56□□□□□ -0.08
CXCL12-205ENST00000395794 ADORA2BP29275 332 aa14.56□□□□□ -0.08
CXCL12-205ENST00000395794 GJA4P35212 333 aa14.56□□□□□ -0.08
CXCL12-205ENST00000395794 SLC5A3P53794 718 aa14.56□□□□□ -0.08
CXCL12-205ENST00000395794 SATB1Q01826 763 aa14.56□□□□□ -0.08
CXCL12-205ENST00000395794 INCA1Q0VD86 236 aa14.56□□□□□ -0.08
CXCL12-205ENST00000395794 CCINQ13939 588 aa14.56□□□□□ -0.08
CXCL12-205ENST00000395794 TMEM196Q5HYL7 178 aa14.56□□□□□ -0.08
CXCL12-205ENST00000395794 HECTD3Q5T447 861 aa14.56□□□□□ -0.08
CXCL12-205ENST00000395794 ANKRD40Q6AI12 368 aa14.56□□□□□ -0.08
CXCL12-205ENST00000395794 PAQR9Q6ZVX9 377 aa14.56□□□□□ -0.08
CXCL12-205ENST00000395794 ELOA2Q8IYF1 753 aaPredicted RBP14.56□□□□□ -0.08
CXCL12-205ENST00000395794 KIAA1958Q8N8K9 716 aa14.56□□□□□ -0.08
CXCL12-205ENST00000395794 ZBTB44Q8NCP5 570 aa14.56□□□□□ -0.08
CXCL12-205ENST00000395794 SPATA20Q8TB22 786 aa14.56□□□□□ -0.08
CXCL12-205ENST00000395794 RIN3Q8TB24 985 aa14.56□□□□□ -0.08
CXCL12-205ENST00000395794 RUBCNQ92622 972 aa14.56□□□□□ -0.08
CXCL12-205ENST00000395794 ERCC4Q92889 916 aaPredicted RBP14.56□□□□□ -0.08
CXCL12-205ENST00000395794 FAXDC2Q96IV6 333 aa14.56□□□□□ -0.08
CXCL12-205ENST00000395794 P2RY13Q9BPV8 354 aa14.56□□□□□ -0.08
CXCL12-205ENST00000395794 TMEM30AQ9NV96 361 aa14.56□□□□□ -0.08
CXCL12-205ENST00000395794 RAB20Q9NX57 234 aa14.56□□□□□ -0.08
CXCL12-205ENST00000395794 SMPD4Q9NXE4 827 aa14.56□□□□□ -0.08
CXCL12-205ENST00000395794 HMGXB4Q9UGU5 601 aa14.56□□□□□ -0.08
CXCL12-205ENST00000395794 ARMCX3Q9UH62 379 aaPredicted RBP14.56□□□□□ -0.08
CXCL12-205ENST00000395794 CHORDC1Q9UHD1 332 aaPredicted RBP14.56□□□□□ -0.08
CXCL12-205ENST00000395794 RAB23Q9ULC3 237 aa14.56□□□□□ -0.08
CXCL12-205ENST00000395794 CIZ1Q9ULV3 898 aaPredicted RBP14.56□□□□□ -0.08
CXCL12-205ENST00000395794 CPQQ9Y646 472 aa14.56□□□□□ -0.08
CXCL12-205ENST00000395794 OTOL1A6NHN0 477 aaPredicted RBP14.55□□□□□ -0.08
CXCL12-205ENST00000395794 OAS1P00973 400 aaKnown RBP14.55□□□□□ -0.08
CXCL12-205ENST00000395794 GALK1P51570 392 aa14.55□□□□□ -0.08
CXCL12-205ENST00000395794 MAP3K7CLP57077 242 aa14.55□□□□□ -0.08
CXCL12-205ENST00000395794 EML3Q32P44 896 aa14.55□□□□□ -0.08
CXCL12-205ENST00000395794 FBXO43Q4G163 708 aa14.55□□□□□ -0.08
CXCL12-205ENST00000395794 Q6ZS52 159 aa14.55□□□□□ -0.08
CXCL12-205ENST00000395794 C12orf29Q8N999 325 aa14.55□□□□□ -0.08
CXCL12-205ENST00000395794 CCDC26Q8TAB7 109 aa14.55□□□□□ -0.08
CXCL12-205ENST00000395794 SCAMP5Q8TAC9 235 aa14.55□□□□□ -0.08
CXCL12-205ENST00000395794 NELL1Q92832 810 aa14.55□□□□□ -0.08
CXCL12-205ENST00000395794 CYFIP2Q96F07 1278 aa14.55□□□□□ -0.08
CXCL12-205ENST00000395794 DHTKD1Q96HY7 919 aaPredicted RBP14.55□□□□□ -0.08
CXCL12-205ENST00000395794 HEXIM2Q96MH2 286 aaKnown RBP14.55□□□□□ -0.08
CXCL12-205ENST00000395794 HNRNPABQ99729 332 aaKnown RBP14.55□□□□□ -0.08
CXCL12-205ENST00000395794 RNF38Q9H0F5 515 aa14.55□□□□□ -0.08
CXCL12-205ENST00000395794 APOBEC3GQ9HC16 384 aaKnown RBP14.55□□□□□ -0.08
CXCL12-205ENST00000395794 CSNK1G1Q9HCP0 422 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms