RNA–Protein interactions for RNA: ENST00000368295.8

ECHDC1-205, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-205ENST00000368295 RASSF8Q8NHQ8 419 aa3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 OTUD7AQ8TE49 926 aaPredicted RBP3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 UCMAQ8WVF2 138 aa3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 STON2Q8WXE9 905 aa3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 RIN2Q8WYP3 895 aaPredicted RBP3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 NACC2Q96BF6 587 aa3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 C1orf74Q96LT6 269 aa3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 HEXIM2Q96MH2 286 aaKnown RBP3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 SLC6A18Q96N87 628 aa3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 PIGSQ96S52 555 aa3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 RHOXF2Q9BQY4 288 aa3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 SLC39A3Q9BRY0 314 aa3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 NUP62CLQ9H1M0 184 aa3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 PHAXQ9H814 394 aaKnown RBP3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 TRIM39Q9HCM9 518 aa3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 ITM2CQ9NQX7 267 aa3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 TCP11L1Q9NUJ3 509 aa3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 ZNF624Q9P2J8 865 aaPredicted RBP3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 TBX21Q9UL17 535 aa3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 KCNH3Q9ULD8 1083 aa3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 HPCAL4Q9UM19 191 aa3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 CAB39Q9Y376 341 aaPredicted RBP3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 DMXL2Q8TDJ6 3036 aa3.8□□□□□ -1.8
ECHDC1-205ENST00000368295 NUP98P52948 1817 aa3.79□□□□□ -1.8
ECHDC1-205ENST00000368295 CELSR3Q9NYQ7 3312 aa3.79□□□□□ -1.8
ECHDC1-205ENST00000368295 MYO7AQ13402 2215 aa3.79□□□□□ -1.8
ECHDC1-205ENST00000368295 AKAP13Q12802 2813 aa3.79□□□□□ -1.8
ECHDC1-205ENST00000368295 FBN2P35556 2912 aa3.79□□□□□ -1.8
ECHDC1-205ENST00000368295 PGPEP1LA6NFU8 196 aa3.79□□□□□ -1.8
ECHDC1-205ENST00000368295 LRRC14BA6NHZ5 514 aa3.79□□□□□ -1.8
ECHDC1-205ENST00000368295 KIAA1324LA8MWY0 1029 aaPredicted RBP3.79□□□□□ -1.8
ECHDC1-205ENST00000368295 ELL2O00472 640 aaPredicted RBP3.79□□□□□ -1.8
ECHDC1-205ENST00000368295 SLC27A2O14975 620 aa3.79□□□□□ -1.8
ECHDC1-205ENST00000368295 SPTLC2O15270 562 aa3.79□□□□□ -1.8
ECHDC1-205ENST00000368295 POLR3GO15318 223 aaPredicted RBP3.79□□□□□ -1.8
ECHDC1-205ENST00000368295 SLC7A4O43246 635 aa3.79□□□□□ -1.8
ECHDC1-205ENST00000368295 PI15O43692 258 aa3.79□□□□□ -1.8
ECHDC1-205ENST00000368295 OPA1O60313 960 aa3.79□□□□□ -1.8
ECHDC1-205ENST00000368295 ULK1O75385 1050 aa3.79□□□□□ -1.8
ECHDC1-205ENST00000368295 SLC22A3O75751 556 aa3.79□□□□□ -1.8
ECHDC1-205ENST00000368295 URI1O94763 535 aaPredicted RBP3.79□□□□□ -1.8
ECHDC1-205ENST00000368295 OPN1MWP04001 364 aa3.79□□□□□ -1.8
ECHDC1-205ENST00000368295 OPN1MW2P0DN77 364 aa3.79□□□□□ -1.8
ECHDC1-205ENST00000368295 OPN1MW3P0DN78 364 aa3.79□□□□□ -1.8
ECHDC1-205ENST00000368295 ITIH2P19823 946 aa3.79□□□□□ -1.8
ECHDC1-205ENST00000368295 HADHAP40939 763 aa3.79□□□□□ -1.8
ECHDC1-205ENST00000368295 TECP42680 631 aa3.79□□□□□ -1.8
ECHDC1-205ENST00000368295 MCM2P49736 904 aa3.79□□□□□ -1.8
ECHDC1-205ENST00000368295 IL1RL1Q01638 556 aa3.79□□□□□ -1.8
ECHDC1-205ENST00000368295 AP1B1Q10567 949 aa3.79□□□□□ -1.8
ECHDC1-205ENST00000368295 CUL4AQ13619 759 aa3.79□□□□□ -1.8
ECHDC1-205ENST00000368295 ANGPT1Q15389 498 aa3.79□□□□□ -1.8
ECHDC1-205ENST00000368295 IFI16Q16666 785 aaKnown RBP3.79□□□□□ -1.8
ECHDC1-205ENST00000368295 GEN1Q17RS7 908 aa3.79□□□□□ -1.8
ECHDC1-205ENST00000368295 FAM110CQ1W6H9 321 aa3.79□□□□□ -1.8
ECHDC1-205ENST00000368295 MMEL1Q495T6 779 aa3.79□□□□□ -1.8
ECHDC1-205ENST00000368295 FAM47AQ5JRC9 791 aa3.79□□□□□ -1.8
ECHDC1-205ENST00000368295 IZUMO3Q5VZ72 239 aa3.79□□□□□ -1.8
ECHDC1-205ENST00000368295 DARS2Q6PI48 645 aaKnown RBP3.79□□□□□ -1.8
ECHDC1-205ENST00000368295 UBE2R2Q712K3 238 aaPredicted RBP3.79□□□□□ -1.8
ECHDC1-205ENST00000368295 PTRH1Q86Y79 214 aaKnown RBP3.79□□□□□ -1.8
ECHDC1-205ENST00000368295 KIF18BQ86Y91 864 aa3.79□□□□□ -1.8
ECHDC1-205ENST00000368295 TRMT2AQ8IZ69 625 aaKnown RBP3.79□□□□□ -1.8
ECHDC1-205ENST00000368295 NUP93Q8N1F7 819 aa3.79□□□□□ -1.8
ECHDC1-205ENST00000368295 CTCFLQ8NI51 663 aaPredicted RBP3.79□□□□□ -1.8
ECHDC1-205ENST00000368295 PIWIL2Q8TC59 973 aaKnown RBP3.79□□□□□ -1.8
ECHDC1-205ENST00000368295 NETO1Q8TDF5 533 aa3.79□□□□□ -1.8
ECHDC1-205ENST00000368295 VWCEQ96DN2 955 aa3.79□□□□□ -1.8
ECHDC1-205ENST00000368295 C16orf45Q96MC5 204 aaPredicted RBP3.79□□□□□ -1.8
ECHDC1-205ENST00000368295 COG8Q96MW5 612 aa3.79□□□□□ -1.8
ECHDC1-205ENST00000368295 C7orf26Q96N11 449 aa3.79□□□□□ -1.8
ECHDC1-205ENST00000368295 ORAI3Q9BRQ5 295 aa3.79□□□□□ -1.8
ECHDC1-205ENST00000368295 MROH8Q9H579 483 aa3.79□□□□□ -1.8
ECHDC1-205ENST00000368295 RTEL1Q9NZ71 1219 aa3.79□□□□□ -1.8
ECHDC1-205ENST00000368295 ANKFY1Q9P2R3 1169 aa3.79□□□□□ -1.8
ECHDC1-205ENST00000368295 CHORDC1Q9UHD1 332 aaPredicted RBP3.79□□□□□ -1.8
ECHDC1-205ENST00000368295 MOSPD1Q9UJG1 213 aa3.79□□□□□ -1.8
ECHDC1-205ENST00000368295 ZNF711Q9Y462 761 aa3.79□□□□□ -1.8
ECHDC1-205ENST00000368295 CAPN6Q9Y6Q1 641 aa3.79□□□□□ -1.8
ECHDC1-205ENST00000368295 CREBBPQ92793 2442 aa3.79□□□□□ -1.8
ECHDC1-205ENST00000368295 A0A0B4J269 797 aa3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 ERVV-1B6SEH8 477 aa3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 FAM227AF5H4B4 570 aa3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 CAPN9O14815 690 aa3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 ADAMTS3O15072 1205 aa3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 MYO1BO43795 1136 aa3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 EFCAB14O75071 495 aa3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 C1QL1O75973 258 aa3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 KIF20AO95235 890 aa3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 STAMBPO95630 424 aa3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 POU2F2P09086 479 aa3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 HMOX1P09601 288 aa3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 LAG3P18627 525 aa3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 RDXP35241 583 aaKnown RBP3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 IGFALSP35858 605 aa3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 LTBRP36941 435 aa3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 NOP2P46087 812 aaKnown RBP3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 CLCN7P51798 805 aa3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 CCL23P55773 120 aa3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 RRP1P56182 461 aaKnown RBP3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms