RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 DCXO43602 365 aa16.57■□□□□ 0.24
CLSTN1-201ENST00000361311 POLBP06746 335 aa16.57■□□□□ 0.24
CLSTN1-201ENST00000361311 PTGIRP43119 386 aa16.57■□□□□ 0.24
CLSTN1-201ENST00000361311 MRPS15P82914 257 aaKnown RBP16.57■□□□□ 0.24
CLSTN1-201ENST00000361311 BST1Q10588 318 aa16.57■□□□□ 0.24
CLSTN1-201ENST00000361311 STX5Q13190 355 aa16.57■□□□□ 0.24
CLSTN1-201ENST00000361311 PDAP1Q13442 181 aaKnown RBP16.57■□□□□ 0.24
CLSTN1-201ENST00000361311 ATP1A4Q13733 1029 aa16.57■□□□□ 0.24
CLSTN1-201ENST00000361311 CCDC33Q8N5R6 958 aa16.57■□□□□ 0.24
CLSTN1-201ENST00000361311 USP13Q92995 863 aaPredicted RBP16.57■□□□□ 0.24
CLSTN1-201ENST00000361311 RMND5BQ96G75 393 aaPredicted RBP16.57■□□□□ 0.24
CLSTN1-201ENST00000361311 MRPL4Q9BYD3 311 aaKnown RBP16.57■□□□□ 0.24
CLSTN1-201ENST00000361311 NKX1-2Q9UD57 310 aaPredicted RBP16.57■□□□□ 0.24
CLSTN1-201ENST00000361311 FAM86B1E9PN63 330 aa16.56■□□□□ 0.24
CLSTN1-201ENST00000361311 ASNSP08243 561 aa16.56■□□□□ 0.24
CLSTN1-201ENST00000361311 FAM86B2P0C5J1 330 aa16.56■□□□□ 0.24
CLSTN1-201ENST00000361311 HSPA1AP0DMV8 641 aaKnown RBP16.56■□□□□ 0.24
CLSTN1-201ENST00000361311 HSPA1BP0DMV9 641 aaKnown RBP16.56■□□□□ 0.24
CLSTN1-201ENST00000361311 GYS1P13807 737 aa16.56■□□□□ 0.24
CLSTN1-201ENST00000361311 MUTP22033 750 aa16.56■□□□□ 0.24
CLSTN1-201ENST00000361311 HMOX2P30519 316 aa16.56■□□□□ 0.24
CLSTN1-201ENST00000361311 SLC1A6P48664 564 aa16.56■□□□□ 0.24
CLSTN1-201ENST00000361311 DLG4P78352 724 aa16.56■□□□□ 0.24
CLSTN1-201ENST00000361311 CDR2LQ86X02 465 aaPredicted RBP16.56■□□□□ 0.24
CLSTN1-201ENST00000361311 ABRAQ8N0Z2 381 aa16.56■□□□□ 0.24
CLSTN1-201ENST00000361311 AS3MTQ9HBK9 375 aa16.56■□□□□ 0.24
CLSTN1-201ENST00000361311 IVNS1ABPQ9Y6Y0 642 aa16.56■□□□□ 0.24
CLSTN1-201ENST00000361311 ABCC6O95255 1503 aa16.56■□□□□ 0.24
CLSTN1-201ENST00000361311 ATP5BP06576 529 aaKnown RBP16.56■□□□□ 0.24
CLSTN1-201ENST00000361311 VSTM1Q6UX27 236 aa16.56■□□□□ 0.24
CLSTN1-201ENST00000361311 FAM43BQ6ZT52 329 aaPredicted RBP16.56■□□□□ 0.24
CLSTN1-201ENST00000361311 TMEM143Q96AN5 459 aa16.56■□□□□ 0.24
CLSTN1-201ENST00000361311 AKT3Q9Y243 479 aa16.56■□□□□ 0.24
CLSTN1-201ENST00000361311 ZNF189O75820 626 aaPredicted RBP16.56■□□□□ 0.24
CLSTN1-201ENST00000361311 KCNA4P22459 653 aa16.56■□□□□ 0.24
CLSTN1-201ENST00000361311 ALDH1A3P47895 512 aa16.56■□□□□ 0.24
CLSTN1-201ENST00000361311 C1QBPQ07021 282 aaKnown RBP16.56■□□□□ 0.24
CLSTN1-201ENST00000361311 TNFAIP1Q13829 316 aa16.56■□□□□ 0.24
CLSTN1-201ENST00000361311 PTK2BQ14289 1009 aa16.56■□□□□ 0.24
CLSTN1-201ENST00000361311 DSTYKQ6XUX3 929 aa16.56■□□□□ 0.24
CLSTN1-201ENST00000361311 ALYREFQ86V81 257 aaKnown RBP16.56■□□□□ 0.24
CLSTN1-201ENST00000361311 SPIRE2Q8WWL2 714 aa16.56■□□□□ 0.24
CLSTN1-201ENST00000361311 CADM1Q9BY67 442 aaKnown RBP16.56■□□□□ 0.24
CLSTN1-201ENST00000361311 NIF3L1Q9GZT8 377 aa16.56■□□□□ 0.24
CLSTN1-201ENST00000361311 COG5Q9UP83 839 aa16.56■□□□□ 0.24
CLSTN1-201ENST00000361311 CCDC78A2IDD5 438 aa16.55■□□□□ 0.24
CLSTN1-201ENST00000361311 EML1O00423 815 aa16.55■□□□□ 0.24
CLSTN1-201ENST00000361311 SLITRK3O94933 977 aa16.55■□□□□ 0.24
CLSTN1-201ENST00000361311 KRT75O95678 551 aa16.55■□□□□ 0.24
CLSTN1-201ENST00000361311 ARP10275 920 aa16.55■□□□□ 0.24
CLSTN1-201ENST00000361311 TFE3P19532 575 aaPredicted RBP16.55■□□□□ 0.24
CLSTN1-201ENST00000361311 RAB27AP51159 221 aa16.55■□□□□ 0.24
CLSTN1-201ENST00000361311 MRPS22P82650 360 aaKnown RBP16.55■□□□□ 0.24
CLSTN1-201ENST00000361311 ZNF669Q96BR6 464 aaPredicted RBP16.55■□□□□ 0.24
CLSTN1-201ENST00000361311 RTFDC1Q9BY42 306 aaPredicted RBP16.55■□□□□ 0.24
CLSTN1-201ENST00000361311 COPS7BQ9H9Q2 264 aaPredicted RBP16.55■□□□□ 0.24
CLSTN1-201ENST00000361311 ATF5Q9Y2D1 282 aaPredicted RBP16.55■□□□□ 0.24
CLSTN1-201ENST00000361311 ZC3H4Q9UPT8 1303 aaKnown RBP16.55■□□□□ 0.24
CLSTN1-201ENST00000361311 M0R3G1 203 aa16.55■□□□□ 0.24
CLSTN1-201ENST00000361311 RGS7P49802 495 aa16.55■□□□□ 0.24
CLSTN1-201ENST00000361311 N4BP2L1Q5TBK1 243 aaPredicted RBP16.55■□□□□ 0.24
CLSTN1-201ENST00000361311 ADCK1Q86TW2 530 aa16.55■□□□□ 0.24
CLSTN1-201ENST00000361311 APBB2Q92870 758 aa16.55■□□□□ 0.24
CLSTN1-201ENST00000361311 NCLNQ969V3 563 aa16.55■□□□□ 0.24
CLSTN1-201ENST00000361311 ZNF333Q96JL9 665 aa16.55■□□□□ 0.24
CLSTN1-201ENST00000361311 PPP1R16BQ96T49 567 aa16.55■□□□□ 0.24
CLSTN1-201ENST00000361311 PRPF4O43172 522 aaKnown RBP eCLIP16.55■□□□□ 0.245e-6■■■□□ 18.8
CLSTN1-201ENST00000361311 SERPINE1P05121 402 aa16.55■□□□□ 0.24
CLSTN1-201ENST00000361311 CPA3P15088 417 aa16.55■□□□□ 0.24
CLSTN1-201ENST00000361311 FOXN2P32314 431 aa16.55■□□□□ 0.24
CLSTN1-201ENST00000361311 GRIK3Q13003 919 aa16.55■□□□□ 0.24
CLSTN1-201ENST00000361311 ITGA9Q13797 1035 aa16.55■□□□□ 0.24
CLSTN1-201ENST00000361311 CDC42EP5Q6NZY7 148 aa16.55■□□□□ 0.24
CLSTN1-201ENST00000361311 ZFP1Q6P2D0 407 aa16.55■□□□□ 0.24
CLSTN1-201ENST00000361311 LRRC8BQ6P9F7 803 aa16.55■□□□□ 0.24
CLSTN1-201ENST00000361311 EEPD1Q7L9B9 569 aa16.55■□□□□ 0.24
CLSTN1-201ENST00000361311 EXOC8Q8IYI6 725 aa16.55■□□□□ 0.24
CLSTN1-201ENST00000361311 NUP93Q8N1F7 819 aa16.55■□□□□ 0.24
CLSTN1-201ENST00000361311 CLEC4FQ8N1N0 589 aa16.55■□□□□ 0.24
CLSTN1-201ENST00000361311 PHACTR1Q9C0D0 580 aa16.55■□□□□ 0.24
CLSTN1-201ENST00000361311 NMUR2Q9GZQ4 415 aa16.55■□□□□ 0.24
CLSTN1-201ENST00000361311 MRGBPQ9NV56 204 aa16.55■□□□□ 0.24
CLSTN1-201ENST00000361311 WTIPA6NIX2 430 aaPredicted RBP16.55■□□□□ 0.24
CLSTN1-201ENST00000361311 FGRP09769 529 aa16.55■□□□□ 0.24
CLSTN1-201ENST00000361311 CDK7P50613 346 aa16.55■□□□□ 0.24
CLSTN1-201ENST00000361311 PALB2Q86YC2 1186 aa16.55■□□□□ 0.24
CLSTN1-201ENST00000361311 DDIASQ8IXT1 998 aa16.55■□□□□ 0.24
CLSTN1-201ENST00000361311 GSTCDQ8NEC7 633 aa16.55■□□□□ 0.24
CLSTN1-201ENST00000361311 ZNF668Q96K58 619 aaPredicted RBP16.55■□□□□ 0.24
CLSTN1-201ENST00000361311 KLHL25Q9H0H3 589 aa16.55■□□□□ 0.24
CLSTN1-201ENST00000361311 TCF7L2Q9NQB0 619 aa16.55■□□□□ 0.24
CLSTN1-201ENST00000361311 BLOC1S6Q9UL45 172 aa16.55■□□□□ 0.24
CLSTN1-201ENST00000361311 SORCS3Q9UPU3 1222 aa16.55■□□□□ 0.24
CLSTN1-201ENST00000361311 TISP43B9A030 160 aa16.54■□□□□ 0.24
CLSTN1-201ENST00000361311 BANF1O75531 89 aa16.54■□□□□ 0.24
CLSTN1-201ENST00000361311 APOA1P02647 267 aa16.54■□□□□ 0.24
CLSTN1-201ENST00000361311 S100BP04271 92 aaPredicted RBP16.54■□□□□ 0.24
CLSTN1-201ENST00000361311 SERPINB1P30740 379 aa16.54■□□□□ 0.24
CLSTN1-201ENST00000361311 SOX11P35716 441 aa16.54■□□□□ 0.24
CLSTN1-201ENST00000361311 FMO1Q01740 532 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 135 ms