RNA–Protein interactions for RNA: ENST00000360093.7

SCN3A-202, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN3A, Length 9,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-202ENST00000360093 RPRD1AQ96P16 312 aaPredicted RBP5.04□□□□□ -1.6
SCN3A-202ENST00000360093 OSMRQ99650 979 aa5.04□□□□□ -1.6
SCN3A-202ENST00000360093 FAM167BQ9BTA0 163 aa5.04□□□□□ -1.6
SCN3A-202ENST00000360093 TSPYL2Q9H2G4 693 aaPredicted RBP5.04□□□□□ -1.6
SCN3A-202ENST00000360093 PDGFCQ9NRA1 345 aa5.04□□□□□ -1.6
SCN3A-202ENST00000360093 KRT82Q9NSB4 513 aa5.04□□□□□ -1.6
SCN3A-202ENST00000360093 THG1LQ9NWX6 298 aaKnown RBP5.04□□□□□ -1.6
SCN3A-202ENST00000360093 STK39Q9UEW8 545 aa5.04□□□□□ -1.6
SCN3A-202ENST00000360093 DCTN4Q9UJW0 460 aa5.04□□□□□ -1.6
SCN3A-202ENST00000360093 TRPC5OSA6NMA1 111 aa5.04□□□□□ -1.6
SCN3A-202ENST00000360093 TCP11X1B4DZS4 312 aa5.04□□□□□ -1.6
SCN3A-202ENST00000360093 STX7O15400 261 aaKnown RBP5.04□□□□□ -1.6
SCN3A-202ENST00000360093 ASS1P00966 412 aaKnown RBP5.04□□□□□ -1.6
SCN3A-202ENST00000360093 NOGQ13253 232 aa5.04□□□□□ -1.6
SCN3A-202ENST00000360093 INPP5AQ14642 412 aa5.04□□□□□ -1.6
SCN3A-202ENST00000360093 COBLL1Q53SF7 1204 aa5.04□□□□□ -1.6
SCN3A-202ENST00000360093 GLRA4Q5JXX5 417 aa5.04□□□□□ -1.6
SCN3A-202ENST00000360093 ERMARDQ5T6L9 678 aa5.04□□□□□ -1.6
SCN3A-202ENST00000360093 OVOS1Q6IE37 1185 aa5.04□□□□□ -1.6
SCN3A-202ENST00000360093 RIN2Q8WYP3 895 aaPredicted RBP5.04□□□□□ -1.6
SCN3A-202ENST00000360093 SERPINB11Q96P15 392 aa5.04□□□□□ -1.6
SCN3A-202ENST00000360093 SLC4A9Q96Q91 983 aa5.04□□□□□ -1.6
SCN3A-202ENST00000360093 PRMT1Q99873 361 aaKnown RBP5.04□□□□□ -1.6
SCN3A-202ENST00000360093 PKD2L2Q9NZM6 624 aa5.04□□□□□ -1.6
SCN3A-202ENST00000360093 CDYLQ9Y232 598 aa5.04□□□□□ -1.6
SCN3A-202ENST00000360093 ROBO3Q96MS0 1386 aa5.04□□□□□ -1.6
SCN3A-202ENST00000360093 MYL6P60660 151 aa5.04□□□□□ -1.6
SCN3A-202ENST00000360093 MAP3K10Q02779 954 aa5.04□□□□□ -1.6
SCN3A-202ENST00000360093 HIST2H2ACQ16777 129 aaPredicted RBP5.04□□□□□ -1.6
SCN3A-202ENST00000360093 NBPF20Q3BBV1 942 aa5.04□□□□□ -1.6
SCN3A-202ENST00000360093 PABPC1LQ4VXU2 614 aaKnown RBP5.04□□□□□ -1.6
SCN3A-202ENST00000360093 HIST2H2AA3Q6FI13 130 aa5.04□□□□□ -1.6
SCN3A-202ENST00000360093 UNC93AQ86WB7 457 aa5.04□□□□□ -1.6
SCN3A-202ENST00000360093 SLC9A9Q8IVB4 645 aa5.04□□□□□ -1.6
SCN3A-202ENST00000360093 GSPT2Q8IYD1 628 aaKnown RBP5.04□□□□□ -1.6
SCN3A-202ENST00000360093 MTMR14Q8NCE2 650 aa5.04□□□□□ -1.6
SCN3A-202ENST00000360093 FAM172AQ8WUF8 416 aa5.04□□□□□ -1.6
SCN3A-202ENST00000360093 GLIS2Q9BZE0 524 aaPredicted RBP5.04□□□□□ -1.6
SCN3A-202ENST00000360093 DMAP1Q9NPF5 467 aaPredicted RBP5.04□□□□□ -1.6
SCN3A-202ENST00000360093 SCUBE2Q9NQ36 999 aa5.04□□□□□ -1.6
SCN3A-202ENST00000360093 STX18Q9P2W9 335 aaKnown RBP5.04□□□□□ -1.6
SCN3A-202ENST00000360093 ARHGAP26Q9UNA1 814 aa5.04□□□□□ -1.6
SCN3A-202ENST00000360093 HACD1B0YJ81 288 aa5.04□□□□□ -1.6
SCN3A-202ENST00000360093 CYTH3O43739 400 aa5.04□□□□□ -1.6
SCN3A-202ENST00000360093 RARGP13631 454 aa5.04□□□□□ -1.6
SCN3A-202ENST00000360093 GJB7Q6PEY0 223 aa5.04□□□□□ -1.6
SCN3A-202ENST00000360093 SLC47A2Q86VL8 602 aa5.04□□□□□ -1.6
SCN3A-202ENST00000360093 FAM71DQ8N9W8 422 aa5.04□□□□□ -1.6
SCN3A-202ENST00000360093 PRPF18Q99633 342 aaKnown RBP5.04□□□□□ -1.6
SCN3A-202ENST00000360093 IRX2Q9BZI1 471 aaPredicted RBP5.04□□□□□ -1.6
SCN3A-202ENST00000360093 DCLK3Q9C098 648 aa5.04□□□□□ -1.6
SCN3A-202ENST00000360093 FAM124BQ9H5Z6 455 aaPredicted RBP5.04□□□□□ -1.6
SCN3A-202ENST00000360093 STN1Q9H668 368 aaKnown RBP5.04□□□□□ -1.6
SCN3A-202ENST00000360093 GID8Q9NWU2 228 aa5.04□□□□□ -1.6
SCN3A-202ENST00000360093 DDX43Q9NXZ2 648 aaKnown RBP5.04□□□□□ -1.6
SCN3A-202ENST00000360093 KIF17Q9P2E2 1029 aa5.04□□□□□ -1.6
SCN3A-202ENST00000360093 G3BP2Q9UN86 482 aaKnown RBP5.04□□□□□ -1.6
SCN3A-202ENST00000360093 DUOX1Q9NRD9 1551 aa5.04□□□□□ -1.6
SCN3A-202ENST00000360093 XRN1Q8IZH2 1706 aaKnown RBP5.04□□□□□ -1.6
SCN3A-202ENST00000360093 SYCE1LA8MT33 242 aa5.04□□□□□ -1.6
SCN3A-202ENST00000360093 KCNA1Q09470 495 aa5.04□□□□□ -1.6
SCN3A-202ENST00000360093 SZRD1Q7Z422 152 aa5.04□□□□□ -1.6
SCN3A-202ENST00000360093 MSL3Q8N5Y2 521 aaKnown RBP5.04□□□□□ -1.6
SCN3A-202ENST00000360093 AKT1S1Q96B36 256 aa5.04□□□□□ -1.6
SCN3A-202ENST00000360093 PNMA5Q96PV4 448 aa5.04□□□□□ -1.6
SCN3A-202ENST00000360093 KCNK16Q96T55 309 aa5.04□□□□□ -1.6
SCN3A-202ENST00000360093 TRIM51Q9BSJ1 452 aa5.04□□□□□ -1.6
SCN3A-202ENST00000360093 SMARCAL1Q9NZC9 954 aa5.04□□□□□ -1.6
SCN3A-202ENST00000360093 AFF4Q9UHB7 1163 aaKnown RBP5.04□□□□□ -1.6
SCN3A-202ENST00000360093 TRHDEQ9UKU6 1024 aa5.04□□□□□ -1.6
SCN3A-202ENST00000360093 AP4E1Q9UPM8 1137 aa5.04□□□□□ -1.6
SCN3A-202ENST00000360093 DOLKQ9UPQ8 538 aa5.04□□□□□ -1.6
SCN3A-202ENST00000360093 USP15Q9Y4E8 981 aaPredicted RBP5.04□□□□□ -1.6
SCN3A-202ENST00000360093 UBIAD1Q9Y5Z9 338 aa5.04□□□□□ -1.6
SCN3A-202ENST00000360093 GLRA3O75311 464 aa5.04□□□□□ -1.6
SCN3A-202ENST00000360093 MBL2P11226 248 aaPredicted RBP5.04□□□□□ -1.6
SCN3A-202ENST00000360093 RFC1P35251 1148 aaPredicted RBP5.04□□□□□ -1.6
SCN3A-202ENST00000360093 SERPINB8P50452 374 aa5.04□□□□□ -1.6
SCN3A-202ENST00000360093 GTF2BQ00403 316 aa5.04□□□□□ -1.6
SCN3A-202ENST00000360093 KRT72Q14CN4 511 aa5.04□□□□□ -1.6
SCN3A-202ENST00000360093 PCSK7Q16549 785 aa5.04□□□□□ -1.6
SCN3A-202ENST00000360093 C1orf186Q6ZWK4 172 aa5.04□□□□□ -1.6
SCN3A-202ENST00000360093 RRM2BQ7LG56 351 aa5.04□□□□□ -1.6
SCN3A-202ENST00000360093 ICA1LQ8NDH6 482 aa5.04□□□□□ -1.6
SCN3A-202ENST00000360093 DNAJB3Q8WWF6 145 aa5.04□□□□□ -1.6
SCN3A-202ENST00000360093 SYT15Q9BQS2 421 aa5.04□□□□□ -1.6
SCN3A-202ENST00000360093 FUCA2Q9BTY2 467 aa5.04□□□□□ -1.6
SCN3A-202ENST00000360093 ING2Q9H160 280 aa5.04□□□□□ -1.6
SCN3A-202ENST00000360093 CASS4Q9NQ75 786 aa5.04□□□□□ -1.6
SCN3A-202ENST00000360093 CHST12Q9NRB3 414 aa5.04□□□□□ -1.6
SCN3A-202ENST00000360093 CHCHD3Q9NX63 227 aaKnown RBP5.04□□□□□ -1.6
SCN3A-202ENST00000360093 SNTG2Q9NY99 539 aa5.04□□□□□ -1.6
SCN3A-202ENST00000360093 TEKT2Q9UIF3 430 aa5.04□□□□□ -1.6
SCN3A-202ENST00000360093 TRMT6Q9UJA5 497 aaKnown RBP5.04□□□□□ -1.6
SCN3A-202ENST00000360093 F5H423 210 aaPredicted RBP5.03□□□□□ -1.6
SCN3A-202ENST00000360093 CXCL8P10145 99 aa5.03□□□□□ -1.6
SCN3A-202ENST00000360093 PSEN1P49768 467 aa5.03□□□□□ -1.6
SCN3A-202ENST00000360093 TMCO4Q5TGY1 634 aa5.03□□□□□ -1.6
SCN3A-202ENST00000360093 SLC20A1Q8WUM9 679 aa5.03□□□□□ -1.6
SCN3A-202ENST00000360093 VAT1Q99536 393 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms