RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 PIGZQ86VD9 579 aa15.46■□□□□ 0.07
CXCL12-201ENST00000343575 THEM5Q8N1Q8 247 aa15.46■□□□□ 0.07
CXCL12-201ENST00000343575 COLGALT1Q8NBJ5 622 aa15.46■□□□□ 0.07
CXCL12-201ENST00000343575 KHSRPQ92945 711 aaKnown RBP eCLIP15.46■□□□□ 0.07
CXCL12-201ENST00000343575 FAM204AQ9H8W3 233 aa15.46■□□□□ 0.07
CXCL12-201ENST00000343575 CHST7Q9NS84 486 aa15.46■□□□□ 0.07
CXCL12-201ENST00000343575 KRT82Q9NSB4 513 aa15.46■□□□□ 0.07
CXCL12-201ENST00000343575 PARVAQ9NVD7 372 aa15.46■□□□□ 0.07
CXCL12-201ENST00000343575 ALG6Q9Y672 507 aa15.46■□□□□ 0.07
CXCL12-201ENST00000343575 HHLA1C9JL84 531 aa15.46■□□□□ 0.06
CXCL12-201ENST00000343575 XPO1O14980 1071 aaKnown RBP15.46■□□□□ 0.06
CXCL12-201ENST00000343575 IFI16Q16666 785 aaKnown RBP15.46■□□□□ 0.06
CXCL12-201ENST00000343575 CCDC70Q6NSX1 233 aa15.46■□□□□ 0.06
CXCL12-201ENST00000343575 FEZF2Q8TBJ5 459 aa15.46■□□□□ 0.06
CXCL12-201ENST00000343575 DPF3Q92784 378 aa15.46■□□□□ 0.06
CXCL12-201ENST00000343575 CSNK1G1Q9HCP0 422 aa15.46■□□□□ 0.06
CXCL12-201ENST00000343575 GEMIN8Q9NWZ8 242 aaKnown RBP15.46■□□□□ 0.06
CXCL12-201ENST00000343575 ANAPC7Q9UJX3 599 aa15.46■□□□□ 0.06
CXCL12-201ENST00000343575 STRIP2Q9ULQ0 834 aa15.46■□□□□ 0.06
CXCL12-201ENST00000343575 SIGLEC16A6NMB1 481 aa15.45■□□□□ 0.06
CXCL12-201ENST00000343575 RNF40O75150 1001 aa15.45■□□□□ 0.06
CXCL12-201ENST00000343575 RFC1P35251 1148 aaPredicted RBP15.45■□□□□ 0.06
CXCL12-201ENST00000343575 MAP3K7CLP57077 242 aa15.45■□□□□ 0.06
CXCL12-201ENST00000343575 ELAVL2Q12926 359 aaKnown RBP15.45■□□□□ 0.06
CXCL12-201ENST00000343575 MESDQ14696 234 aa15.45■□□□□ 0.06
CXCL12-201ENST00000343575 CTXN3Q4LDR2 81 aa15.45■□□□□ 0.06
CXCL12-201ENST00000343575 TRNP1Q6NT89 227 aa15.45■□□□□ 0.06
CXCL12-201ENST00000343575 C11orf63Q6NUN7 778 aa15.45■□□□□ 0.06
CXCL12-201ENST00000343575 PRSS55Q6UWB4 352 aaPredicted RBP15.45■□□□□ 0.06
CXCL12-201ENST00000343575 OLFML1Q6UWY5 402 aa15.45■□□□□ 0.06
CXCL12-201ENST00000343575 FAM183BPQ6ZVS7 135 aa15.45■□□□□ 0.06
CXCL12-201ENST00000343575 HERC6Q8IVU3 1022 aa15.45■□□□□ 0.06
CXCL12-201ENST00000343575 SUGP1Q8IWZ8 645 aaKnown RBP15.45■□□□□ 0.06
CXCL12-201ENST00000343575 SCUBE3Q8IX30 993 aa15.45■□□□□ 0.06
CXCL12-201ENST00000343575 JOSD2Q8TAC2 188 aa15.45■□□□□ 0.06
CXCL12-201ENST00000343575 CLEC4CQ8WTT0 213 aa15.45■□□□□ 0.06
CXCL12-201ENST00000343575 ZNF558Q96NG5 402 aa15.45■□□□□ 0.06
CXCL12-201ENST00000343575 MED10Q9BTT4 135 aa15.45■□□□□ 0.06
CXCL12-201ENST00000343575 TTPALQ9BTX7 342 aa15.45■□□□□ 0.06
CXCL12-201ENST00000343575 DNAI2Q9GZS0 605 aa15.45■□□□□ 0.06
CXCL12-201ENST00000343575 LCHNA4D1U4 455 aa15.44■□□□□ 0.06
CXCL12-201ENST00000343575 CCDC85CA6NKD9 419 aa15.44■□□□□ 0.06
CXCL12-201ENST00000343575 GOLGA8SH3BPF8 625 aa15.44■□□□□ 0.06
CXCL12-201ENST00000343575 SHOX2O60902 331 aaPredicted RBP15.44■□□□□ 0.06
CXCL12-201ENST00000343575 SRGAP2O75044 1071 aa15.44■□□□□ 0.06
CXCL12-201ENST00000343575 AP1G2O75843 785 aa15.44■□□□□ 0.06
CXCL12-201ENST00000343575 VNN2O95498 520 aa15.44■□□□□ 0.06
CXCL12-201ENST00000343575 FAM200BP0CF97 657 aa15.44■□□□□ 0.06
CXCL12-201ENST00000343575 BDNFP23560 247 aa15.44■□□□□ 0.06
CXCL12-201ENST00000343575 TSPY1Q01534 308 aa15.44■□□□□ 0.06
CXCL12-201ENST00000343575 TAF5Q15542 800 aa15.44■□□□□ 0.06
CXCL12-201ENST00000343575 SLC39A12Q504Y0 691 aa15.44■□□□□ 0.06
CXCL12-201ENST00000343575 DAB2IPQ5VWQ8 1189 aa15.44■□□□□ 0.06
CXCL12-201ENST00000343575 DNAJC24Q6P3W2 148 aa15.44■□□□□ 0.06
CXCL12-201ENST00000343575 GPRIN1Q7Z2K8 1008 aa15.44■□□□□ 0.06
CXCL12-201ENST00000343575 SP7Q8TDD2 431 aaPredicted RBP15.44■□□□□ 0.06
CXCL12-201ENST00000343575 COG1Q8WTW3 980 aa15.44■□□□□ 0.06
CXCL12-201ENST00000343575 CD101Q93033 1021 aa15.44■□□□□ 0.06
CXCL12-201ENST00000343575 HSFY1Q96LI6 401 aa15.44■□□□□ 0.06
CXCL12-201ENST00000343575 MCEEQ96PE7 176 aa15.44■□□□□ 0.06
CXCL12-201ENST00000343575 MRPL47Q9HD33 250 aaKnown RBP15.44■□□□□ 0.06
CXCL12-201ENST00000343575 TMEM59LQ9UK28 342 aa15.44■□□□□ 0.06
CXCL12-201ENST00000343575 SCINQ9Y6U3 715 aa15.44■□□□□ 0.06
CXCL12-201ENST00000343575 RANBP2P49792 3224 aaKnown RBP15.44■□□□□ 0.06
CXCL12-201ENST00000343575 ADAM12O43184 909 aa15.44■□□□□ 0.06
CXCL12-201ENST00000343575 LAG3P18627 525 aa15.44■□□□□ 0.06
CXCL12-201ENST00000343575 COMTP21964 271 aa15.44■□□□□ 0.06
CXCL12-201ENST00000343575 NDUFV1P49821 464 aa15.44■□□□□ 0.06
CXCL12-201ENST00000343575 C9orf50Q5SZB4 431 aa15.44■□□□□ 0.06
CXCL12-201ENST00000343575 SPOUT1Q5T280 376 aaKnown RBP15.44■□□□□ 0.06
CXCL12-201ENST00000343575 EMC1Q8N766 993 aa15.44■□□□□ 0.06
CXCL12-201ENST00000343575 KCTD13Q8WZ19 329 aa15.44■□□□□ 0.06
CXCL12-201ENST00000343575 CLP1Q92989 425 aaKnown RBP15.44■□□□□ 0.06
CXCL12-201ENST00000343575 SMARCD1Q96GM5 515 aa15.44■□□□□ 0.06
CXCL12-201ENST00000343575 HES6Q96HZ4 224 aa15.44■□□□□ 0.06
CXCL12-201ENST00000343575 CALR3Q96L12 384 aaKnown RBP15.44■□□□□ 0.06
CXCL12-201ENST00000343575 SYNCQ9H7C4 482 aa15.44■□□□□ 0.06
CXCL12-201ENST00000343575 CYLDQ9NQC7 956 aa15.44■□□□□ 0.06
CXCL12-201ENST00000343575 WDR35Q9P2L0 1181 aa15.44■□□□□ 0.06
CXCL12-201ENST00000343575 HPCAL4Q9UM19 191 aa15.44■□□□□ 0.06
CXCL12-201ENST00000343575 SNX12Q9UMY4 172 aa15.44■□□□□ 0.06
CXCL12-201ENST00000343575 INSL6Q9Y581 213 aa15.44■□□□□ 0.06
CXCL12-201ENST00000343575 SLC4A7Q9Y6M7 1214 aa15.44■□□□□ 0.06
CXCL12-201ENST00000343575 TMEM110-MUSTN1A8MSY1 372 aa15.43■□□□□ 0.06
CXCL12-201ENST00000343575 KRT3P12035 628 aa15.43■□□□□ 0.06
CXCL12-201ENST00000343575 ATP2A2P16615 1042 aaKnown RBP15.43■□□□□ 0.06
CXCL12-201ENST00000343575 CYP2F1P24903 491 aa15.43■□□□□ 0.06
CXCL12-201ENST00000343575 ADCY1Q08828 1119 aa15.43■□□□□ 0.06
CXCL12-201ENST00000343575 MAPRE1Q15691 268 aaKnown RBP15.43■□□□□ 0.06
CXCL12-201ENST00000343575 USP41Q3LFD5 358 aa15.43■□□□□ 0.06
CXCL12-201ENST00000343575 RAB41Q5JT25 222 aa15.43■□□□□ 0.06
CXCL12-201ENST00000343575 OR6B2Q6IFH4 312 aa15.43■□□□□ 0.06
CXCL12-201ENST00000343575 ZNF280DQ6N043 979 aa15.43■□□□□ 0.06
CXCL12-201ENST00000343575 PEX26Q7Z412 305 aa15.43■□□□□ 0.06
CXCL12-201ENST00000343575 PHOSPHO2Q8TCD6 241 aa15.43■□□□□ 0.06
CXCL12-201ENST00000343575 NDRG1Q92597 394 aaKnown RBP15.43■□□□□ 0.06
CXCL12-201ENST00000343575 SLC9A7Q96T83 725 aa15.43■□□□□ 0.06
CXCL12-201ENST00000343575 PSMB7Q99436 277 aa15.43■□□□□ 0.06
CXCL12-201ENST00000343575 METTL5Q9NRN9 209 aaKnown RBP15.43■□□□□ 0.06
CXCL12-201ENST00000343575 SAR1BQ9Y6B6 198 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 144 ms