RNA–Protein interactions for RNA: ENST00000338745.10

SATB1-201, Transcript of SATB homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SATB1, Length 7,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-201ENST00000338745 NMRK2Q9NPI5 230 aa17.28■□□□□ 0.36
SATB1-201ENST00000338745 CHST12Q9NRB3 414 aa17.28■□□□□ 0.36
SATB1-201ENST00000338745 POU1F1P28069 291 aa17.27■□□□□ 0.36
SATB1-201ENST00000338745 KRR1Q13601 381 aaKnown RBP17.27■□□□□ 0.36
SATB1-201ENST00000338745 XKR3Q5GH77 459 aa17.27■□□□□ 0.36
SATB1-201ENST00000338745 VPS37AQ8NEZ2 397 aa17.27■□□□□ 0.36
SATB1-201ENST00000338745 TUBE1Q9UJT0 475 aa17.27■□□□□ 0.36
SATB1-201ENST00000338745 ITGA4P13612 1032 aa17.27■□□□□ 0.36
SATB1-201ENST00000338745 CD44P16070 742 aaKnown RBP17.27■□□□□ 0.36
SATB1-201ENST00000338745 NAPEPLDQ6IQ20 393 aa17.27■□□□□ 0.36
SATB1-201ENST00000338745 EFCAB1Q9HAE3 211 aa17.27■□□□□ 0.36
SATB1-201ENST00000338745 CNTN1Q12860 1018 aa17.27■□□□□ 0.36
SATB1-201ENST00000338745 VN1R5Q7Z5H4 357 aa17.27■□□□□ 0.36
SATB1-201ENST00000338745 MOV10L1Q9BXT6 1211 aaKnown RBP17.27■□□□□ 0.36
SATB1-201ENST00000338745 RMND5AQ9H871 391 aa17.27■□□□□ 0.36
SATB1-201ENST00000338745 GPRC5DQ9NZD1 345 aa17.27■□□□□ 0.36
SATB1-201ENST00000338745 DDX20Q9UHI6 824 aaKnown RBP17.27■□□□□ 0.36
SATB1-201ENST00000338745 FAM25AB3EWG3 89 aa17.27■□□□□ 0.36
SATB1-201ENST00000338745 FAM25CB3EWG5 89 aa17.27■□□□□ 0.36
SATB1-201ENST00000338745 FAM25GB3EWG6 89 aa17.27■□□□□ 0.36
SATB1-201ENST00000338745 SLC26A4O43511 780 aa17.27■□□□□ 0.36
SATB1-201ENST00000338745 CSNK2BP67870 215 aa17.27■□□□□ 0.36
SATB1-201ENST00000338745 EFL1Q7Z2Z2 1120 aaKnown RBP17.27■□□□□ 0.36
SATB1-201ENST00000338745 STRA8Q7Z7C7 330 aa17.27■□□□□ 0.36
SATB1-201ENST00000338745 CASP10Q92851 521 aa17.27■□□□□ 0.36
SATB1-201ENST00000338745 TMEM237Q96Q45 408 aa17.27■□□□□ 0.36
SATB1-201ENST00000338745 CNGB3Q9NQW8 809 aa17.27■□□□□ 0.36
SATB1-201ENST00000338745 M0QYT0 321 aa17.27■□□□□ 0.35
SATB1-201ENST00000338745 UBOX5O94941 541 aa17.27■□□□□ 0.35
SATB1-201ENST00000338745 APLFQ8IW19 511 aaPredicted RBP17.27■□□□□ 0.35
SATB1-201ENST00000338745 SCFD2Q8WU76 684 aa17.27■□□□□ 0.35
SATB1-201ENST00000338745 MTA3Q9BTC8 594 aa17.27■□□□□ 0.35
SATB1-201ENST00000338745 VTA1Q9NP79 307 aa17.27■□□□□ 0.35
SATB1-201ENST00000338745 DPP3Q9NY33 737 aa17.27■□□□□ 0.35
SATB1-201ENST00000338745 MRPL39Q9NYK5 338 aaKnown RBP17.27■□□□□ 0.35
SATB1-201ENST00000338745 CRLS1Q9UJA2 301 aa17.27■□□□□ 0.35
SATB1-201ENST00000338745 TBX20Q9UMR3 447 aa17.27■□□□□ 0.35
SATB1-201ENST00000338745 RPS6KL1Q9Y6S9 549 aa17.27■□□□□ 0.35
SATB1-201ENST00000338745 TRAPPC3O43617 180 aa17.27■□□□□ 0.35
SATB1-201ENST00000338745 FAM20BO75063 409 aa17.27■□□□□ 0.35
SATB1-201ENST00000338745 GSTM1P09488 218 aa17.27■□□□□ 0.35
SATB1-201ENST00000338745 NUP62P37198 522 aaPredicted RBP17.27■□□□□ 0.35
SATB1-201ENST00000338745 CUL2Q13617 745 aa17.27■□□□□ 0.35
SATB1-201ENST00000338745 HIST2H2ACQ16777 129 aaPredicted RBP17.27■□□□□ 0.35
SATB1-201ENST00000338745 HIST2H2AA3Q6FI13 130 aa17.27■□□□□ 0.35
SATB1-201ENST00000338745 DNAJC7Q99615 494 aa17.27■□□□□ 0.35
SATB1-201ENST00000338745 TMEM121Q9BTD3 319 aa17.27■□□□□ 0.35
SATB1-201ENST00000338745 MYO3AQ8NEV4 1616 aa17.27■□□□□ 0.35
SATB1-201ENST00000338745 OR1G1P47890 313 aa17.27■□□□□ 0.35
SATB1-201ENST00000338745 UXS1Q8NBZ7 420 aa17.27■□□□□ 0.35
SATB1-201ENST00000338745 DMAP1Q9NPF5 467 aaPredicted RBP17.27■□□□□ 0.35
SATB1-201ENST00000338745 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.27■□□□□ 0.35
SATB1-201ENST00000338745 ATP6V1HQ9UI12 483 aa17.27■□□□□ 0.35
SATB1-201ENST00000338745 IGSF9BQ9UPX0 1349 aa17.26■□□□□ 0.35
SATB1-201ENST00000338745 BFSP2Q13515 415 aa17.26■□□□□ 0.35
SATB1-201ENST00000338745 EFHC1Q5JVL4 640 aa17.26■□□□□ 0.35
SATB1-201ENST00000338745 PGBD3Q8N328 593 aa17.26■□□□□ 0.35
SATB1-201ENST00000338745 FUT8Q9BYC5 575 aa17.26■□□□□ 0.35
SATB1-201ENST00000338745 FNTAP49354 379 aa17.26■□□□□ 0.35
SATB1-201ENST00000338745 SEMA4DQ92854 862 aa17.26■□□□□ 0.35
SATB1-201ENST00000338745 SLC1A6P48664 564 aa17.26■□□□□ 0.35
SATB1-201ENST00000338745 CASP4P49662 377 aa17.26■□□□□ 0.35
SATB1-201ENST00000338745 TMED8Q6PL24 325 aaPredicted RBP17.26■□□□□ 0.35
SATB1-201ENST00000338745 NAGPAQ9UK23 515 aa17.26■□□□□ 0.35
SATB1-201ENST00000338745 PCDHB7Q9Y5E2 793 aa17.26■□□□□ 0.35
SATB1-201ENST00000338745 CHRNB3Q05901 458 aa17.26■□□□□ 0.35
SATB1-201ENST00000338745 NCF4Q15080 339 aa17.26■□□□□ 0.35
SATB1-201ENST00000338745 EDRF1Q3B7T1 1238 aa17.26■□□□□ 0.35
SATB1-201ENST00000338745 SNX30Q5VWJ9 437 aa17.26■□□□□ 0.35
SATB1-201ENST00000338745 SLC47A2Q86VL8 602 aa17.26■□□□□ 0.35
SATB1-201ENST00000338745 RUSC1Q9BVN2 902 aa17.26■□□□□ 0.35
SATB1-201ENST00000338745 FXR2P51116 673 aaKnown RBP eCLIP17.26■□□□□ 0.35
SATB1-201ENST00000338745 PEX1O43933 1283 aa17.26■□□□□ 0.35
SATB1-201ENST00000338745 MAGED4Q96JG8 741 aa17.26■□□□□ 0.35
SATB1-201ENST00000338745 PPP1R10Q96QC0 940 aaKnown RBP17.26■□□□□ 0.35
SATB1-201ENST00000338745 C6orf62Q9GZU0 229 aaPredicted RBP17.26■□□□□ 0.35
SATB1-201ENST00000338745 KLK14Q9P0G3 267 aa17.26■□□□□ 0.35
SATB1-201ENST00000338745 SAC3D1A6NKF1 404 aa17.25■□□□□ 0.35
SATB1-201ENST00000338745 DENND1BQ6P3S1 775 aa17.25■□□□□ 0.35
SATB1-201ENST00000338745 KLHL20Q9Y2M5 609 aa17.25■□□□□ 0.35
SATB1-201ENST00000338745 ALKQ9UM73 1620 aa17.25■□□□□ 0.35
SATB1-201ENST00000338745 C2orf81A6NN90 581 aa17.25■□□□□ 0.35
SATB1-201ENST00000338745 SLC37A4O43826 429 aa17.25■□□□□ 0.35
SATB1-201ENST00000338745 ALOX15P16050 662 aaPredicted RBP17.25■□□□□ 0.35
SATB1-201ENST00000338745 IL5RAQ01344 420 aa17.25■□□□□ 0.35
SATB1-201ENST00000338745 GDPD5Q8WTR4 605 aa17.25■□□□□ 0.35
SATB1-201ENST00000338745 CDC42EP4Q9H3Q1 356 aaKnown RBP17.25■□□□□ 0.35
SATB1-201ENST00000338745 TRIM43BA6NCK2 446 aa17.25■□□□□ 0.35
SATB1-201ENST00000338745 FAM200BP0CF97 657 aa17.25■□□□□ 0.35
SATB1-201ENST00000338745 MAPK11Q15759 364 aa17.25■□□□□ 0.35
SATB1-201ENST00000338745 NUDT18Q6ZVK8 323 aa17.25■□□□□ 0.35
SATB1-201ENST00000338745 C3orf20Q8ND61 904 aa17.25■□□□□ 0.35
SATB1-201ENST00000338745 MXRA8Q9BRK3 442 aa17.25■□□□□ 0.35
SATB1-201ENST00000338745 DDX18Q9NVP1 670 aaKnown RBP17.25■□□□□ 0.35
SATB1-201ENST00000338745 DDX39BQ13838 428 aaKnown RBP17.25■□□□□ 0.35
SATB1-201ENST00000338745 EZH2Q15910 746 aaKnown RBP17.25■□□□□ 0.35
SATB1-201ENST00000338745 C16orf86Q6ZW13 317 aa17.25■□□□□ 0.35
SATB1-201ENST00000338745 CPB2Q96IY4 423 aa17.25■□□□□ 0.35
SATB1-201ENST00000338745 SNX8Q9Y5X2 465 aa17.25■□□□□ 0.35
SATB1-201ENST00000338745 C16orf72Q14CZ0 275 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 176 ms