RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 KATNA1O75449 491 aa16.95■□□□□ 0.3
PTCH1-201ENST00000331920 MAP3K6O95382 1288 aa16.95■□□□□ 0.3
PTCH1-201ENST00000331920 PTSQ03393 145 aa16.95■□□□□ 0.3
PTCH1-201ENST00000331920 PRR23CQ6ZRP0 262 aa16.95■□□□□ 0.3
PTCH1-201ENST00000331920 UNC5CLQ8IV45 518 aa16.95■□□□□ 0.3
PTCH1-201ENST00000331920 SSNA1O43805 119 aa16.95■□□□□ 0.3
PTCH1-201ENST00000331920 KCNB1Q14721 858 aa16.95■□□□□ 0.3
PTCH1-201ENST00000331920 NEDD8Q15843 81 aa16.95■□□□□ 0.3
PTCH1-201ENST00000331920 TXNRD1Q16881 649 aa16.95■□□□□ 0.3
PTCH1-201ENST00000331920 ATP6AP1LQ52LC2 224 aa16.95■□□□□ 0.3
PTCH1-201ENST00000331920 METTL5Q9NRN9 209 aaKnown RBP16.95■□□□□ 0.3
PTCH1-201ENST00000331920 GPRC5DQ9NZD1 345 aa16.95■□□□□ 0.3
PTCH1-201ENST00000331920 ITGB6P18564 788 aa16.95■□□□□ 0.3
PTCH1-201ENST00000331920 PIGHQ14442 188 aaPredicted RBP16.95■□□□□ 0.3
PTCH1-201ENST00000331920 LNPEPQ9UIQ6 1025 aa16.95■□□□□ 0.3
PTCH1-201ENST00000331920 ASAP1Q9ULH1 1129 aa16.95■□□□□ 0.3
PTCH1-201ENST00000331920 KPNA5O15131 536 aa16.95■□□□□ 0.3
PTCH1-201ENST00000331920 SLC1A1P43005 524 aa16.95■□□□□ 0.3
PTCH1-201ENST00000331920 DENND5BQ6ZUT9 1274 aa16.95■□□□□ 0.3
PTCH1-201ENST00000331920 ENOSF1Q7L5Y1 443 aa16.95■□□□□ 0.3
PTCH1-201ENST00000331920 TTC39CQ8N584 583 aa16.95■□□□□ 0.3
PTCH1-201ENST00000331920 AGTP01019 485 aa16.94■□□□□ 0.3
PTCH1-201ENST00000331920 ABATP80404 500 aa16.94■□□□□ 0.3
PTCH1-201ENST00000331920 ADGRF4Q8IZF3 695 aa16.94■□□□□ 0.3
PTCH1-201ENST00000331920 TEX13BQ9BXU2 312 aa16.94■□□□□ 0.3
PTCH1-201ENST00000331920 PDE9AO76083 593 aa16.94■□□□□ 0.3
PTCH1-201ENST00000331920 OTUD3Q5T2D3 398 aaPredicted RBP16.94■□□□□ 0.3
PTCH1-201ENST00000331920 TAF2Q6P1X5 1199 aa16.94■□□□□ 0.3
PTCH1-201ENST00000331920 SPATA4Q8NEY3 305 aa16.94■□□□□ 0.3
PTCH1-201ENST00000331920 NEK7Q8TDX7 302 aa16.94■□□□□ 0.3
PTCH1-201ENST00000331920 UNKQ9C0B0 810 aaKnown RBP16.94■□□□□ 0.3
PTCH1-201ENST00000331920 MCUBQ9NWR8 336 aa16.94■□□□□ 0.3
PTCH1-201ENST00000331920 SNRPAP09012 282 aaKnown RBP16.94■□□□□ 0.3
PTCH1-201ENST00000331920 TMEM26Q6ZUK4 368 aa16.94■□□□□ 0.3
PTCH1-201ENST00000331920 SPPL2AQ8TCT8 520 aa16.94■□□□□ 0.3
PTCH1-201ENST00000331920 ILKAPQ9H0C8 392 aaPredicted RBP16.94■□□□□ 0.3
PTCH1-201ENST00000331920 JPH1Q9HDC5 661 aaPredicted RBP16.94■□□□□ 0.3
PTCH1-201ENST00000331920 SH3GLB2Q9NR46 395 aa16.94■□□□□ 0.3
PTCH1-201ENST00000331920 PIK3CDO00329 1044 aa16.94■□□□□ 0.3
PTCH1-201ENST00000331920 PPP2R1BP30154 601 aa16.94■□□□□ 0.3
PTCH1-201ENST00000331920 SFNP31947 248 aa16.94■□□□□ 0.3
PTCH1-201ENST00000331920 HALP42357 657 aa16.94■□□□□ 0.3
PTCH1-201ENST00000331920 POU5F1Q01860 360 aaKnown RBP16.94■□□□□ 0.3
PTCH1-201ENST00000331920 MAP4K1Q92918 833 aa16.94■□□□□ 0.3
PTCH1-201ENST00000331920 HLA-DQA1Q5Y7H0 255 aa16.94■□□□□ 0.3
PTCH1-201ENST00000331920 DENND1BQ6P3S1 775 aa16.94■□□□□ 0.3
PTCH1-201ENST00000331920 SYDE1Q6ZW31 735 aaPredicted RBP16.94■□□□□ 0.3
PTCH1-201ENST00000331920 TSPAN14Q8NG11 270 aa16.94■□□□□ 0.3
PTCH1-201ENST00000331920 PTGES3LE9PB15 166 aa16.94■□□□□ 0.3
PTCH1-201ENST00000331920 ADCY6O43306 1168 aa16.94■□□□□ 0.3
PTCH1-201ENST00000331920 BCL10O95999 233 aa16.94■□□□□ 0.3
PTCH1-201ENST00000331920 PTGER2P43116 358 aa16.94■□□□□ 0.3
PTCH1-201ENST00000331920 TERB1Q8NA31 727 aa16.94■□□□□ 0.3
PTCH1-201ENST00000331920 MXD3Q9BW11 206 aa16.94■□□□□ 0.3
PTCH1-201ENST00000331920 BATF3Q9NR55 127 aa16.94■□□□□ 0.3
PTCH1-201ENST00000331920 UGGT2Q9NYU1 1516 aa16.94■□□□□ 0.3
PTCH1-201ENST00000331920 ZMYM3Q14202 1370 aa16.94■□□□□ 0.3
PTCH1-201ENST00000331920 PP2D1A8MPX8 630 aa16.93■□□□□ 0.3
PTCH1-201ENST00000331920 RNASEH1O60930 286 aaKnown RBP16.93■□□□□ 0.3
PTCH1-201ENST00000331920 P4HBP07237 508 aaKnown RBP16.93■□□□□ 0.3
PTCH1-201ENST00000331920 TSPAN19P0C672 248 aa16.93■□□□□ 0.3
PTCH1-201ENST00000331920 KCTD21Q4G0X4 260 aa16.93■□□□□ 0.3
PTCH1-201ENST00000331920 CHPFQ8IZ52 775 aa16.93■□□□□ 0.3
PTCH1-201ENST00000331920 SEMA4DQ92854 862 aa16.93■□□□□ 0.3
PTCH1-201ENST00000331920 MTFMTQ96DP5 389 aaKnown RBP16.93■□□□□ 0.3
PTCH1-201ENST00000331920 SYNPO2Q9UMS6 1093 aa16.93■□□□□ 0.3
PTCH1-201ENST00000331920 TDRD10Q5VZ19 366 aaKnown RBP16.93■□□□□ 0.3
PTCH1-201ENST00000331920 RASGRP2Q7LDG7 609 aa16.93■□□□□ 0.3
PTCH1-201ENST00000331920 HAUS6Q7Z4H7 955 aa16.93■□□□□ 0.3
PTCH1-201ENST00000331920 GAL3ST3Q96A11 431 aa16.93■□□□□ 0.3
PTCH1-201ENST00000331920 MPP4Q96JB8 637 aa16.93■□□□□ 0.3
PTCH1-201ENST00000331920 BAIAP3O94812 1187 aa16.93■□□□□ 0.3
PTCH1-201ENST00000331920 C6orf222P0C671 652 aaPredicted RBP16.93■□□□□ 0.3
PTCH1-201ENST00000331920 TRAP1Q12931 704 aaKnown RBP16.93■□□□□ 0.3
PTCH1-201ENST00000331920 NCOA4Q13772 614 aa16.93■□□□□ 0.3
PTCH1-201ENST00000331920 FAXCQ5TGI0 409 aa16.93■□□□□ 0.3
PTCH1-201ENST00000331920 LPCAT2Q7L5N7 544 aa16.93■□□□□ 0.3
PTCH1-201ENST00000331920 HPS3Q969F9 1004 aa16.93■□□□□ 0.3
PTCH1-201ENST00000331920 ACSL4O60488 711 aa16.93■□□□□ 0.3
PTCH1-201ENST00000331920 RGS20O76081 388 aa16.93■□□□□ 0.3
PTCH1-201ENST00000331920 KYAT1Q16773 422 aa16.93■□□□□ 0.3
PTCH1-201ENST00000331920 SLC9A6Q92581 669 aa16.93■□□□□ 0.3
PTCH1-201ENST00000331920 HAO1Q9UJM8 370 aa16.93■□□□□ 0.3
PTCH1-201ENST00000331920 BTN3A2P78410 334 aa16.93■□□□□ 0.3
PTCH1-201ENST00000331920 SETD3Q86TU7 594 aaPredicted RBP16.93■□□□□ 0.3
PTCH1-201ENST00000331920 FAM20CQ8IXL6 584 aa16.93■□□□□ 0.3
PTCH1-201ENST00000331920 ZSCAN18Q8TBC5 510 aaPredicted RBP16.93■□□□□ 0.3
PTCH1-201ENST00000331920 PARD3Q8TEW0 1356 aa16.93■□□□□ 0.3
PTCH1-201ENST00000331920 SH3BGRLO75368 114 aa16.93■□□□□ 0.3
PTCH1-201ENST00000331920 SPP2Q13103 211 aa16.93■□□□□ 0.3
PTCH1-201ENST00000331920 PAN2Q504Q3 1202 aaKnown RBP16.93■□□□□ 0.3
PTCH1-201ENST00000331920 EFL1Q7Z2Z2 1120 aaKnown RBP16.93■□□□□ 0.3
PTCH1-201ENST00000331920 WDCPQ9H6R7 721 aa16.93■□□□□ 0.3
PTCH1-201ENST00000331920 BTBD3Q9Y2F9 522 aa16.93■□□□□ 0.3
PTCH1-201ENST00000331920 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.92■□□□□ 0.3
PTCH1-201ENST00000331920 MAGEA13PA6NCF6 341 aa16.92■□□□□ 0.3
PTCH1-201ENST00000331920 CACNA2D1P54289 1103 aa16.92■□□□□ 0.3
PTCH1-201ENST00000331920 ZNF177Q13360 481 aaPredicted RBP16.92■□□□□ 0.3
PTCH1-201ENST00000331920 PDK1Q15118 436 aa16.92■□□□□ 0.3
PTCH1-201ENST00000331920 CAPSLQ8WWF8 208 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms