RNA–Protein interactions for RNA: ENST00000299633.6

HDGFL3-201, Transcript of HDGF like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDGFL3, Length 12,733 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-201ENST00000299633 DARSP14868 501 aaKnown RBP11.55□□□□□ -0.56
HDGFL3-201ENST00000299633 MAGEA6P43360 314 aa11.55□□□□□ -0.56
HDGFL3-201ENST00000299633 LRRC70Q7Z2Q7 622 aa11.55□□□□□ -0.56
HDGFL3-201ENST00000299633 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.55□□□□□ -0.56
HDGFL3-201ENST00000299633 PALB2Q86YC2 1186 aa11.55□□□□□ -0.56
HDGFL3-201ENST00000299633 ASIC4Q96FT7 647 aa11.55□□□□□ -0.56
HDGFL3-201ENST00000299633 C15orf59Q2T9L4 293 aaPredicted RBP11.55□□□□□ -0.56
HDGFL3-201ENST00000299633 C11orf96Q7Z7L8 435 aa11.55□□□□□ -0.56
HDGFL3-201ENST00000299633 ZNF615Q8N8J6 731 aa11.55□□□□□ -0.56
HDGFL3-201ENST00000299633 NOA1Q8NC60 698 aaKnown RBP11.55□□□□□ -0.56
HDGFL3-201ENST00000299633 NRKQ7Z2Y5 1582 aa11.55□□□□□ -0.56
HDGFL3-201ENST00000299633 PGK2P07205 417 aa11.55□□□□□ -0.56
HDGFL3-201ENST00000299633 CD58P19256 250 aa11.55□□□□□ -0.56
HDGFL3-201ENST00000299633 RRN3Q9NYV6 651 aa11.55□□□□□ -0.56
HDGFL3-201ENST00000299633 OR7A10O76100 309 aa11.54□□□□□ -0.56
HDGFL3-201ENST00000299633 POC5Q8NA72 575 aa11.54□□□□□ -0.56
HDGFL3-201ENST00000299633 MANSC1Q9H8J5 431 aa11.54□□□□□ -0.56
HDGFL3-201ENST00000299633 IP6K2Q9UHH9 426 aa11.54□□□□□ -0.56
HDGFL3-201ENST00000299633 MYRFQ9Y2G1 1151 aa11.54□□□□□ -0.56
HDGFL3-201ENST00000299633 G3V2T6 193 aa11.54□□□□□ -0.56
HDGFL3-201ENST00000299633 NOS3P29474 1203 aa11.54□□□□□ -0.56
HDGFL3-201ENST00000299633 TYSND1Q2T9J0 566 aa11.54□□□□□ -0.56
HDGFL3-201ENST00000299633 SCARA5Q6ZMJ2 495 aa11.54□□□□□ -0.56
HDGFL3-201ENST00000299633 AK8Q96MA6 479 aa11.54□□□□□ -0.56
HDGFL3-201ENST00000299633 VPS35Q96QK1 796 aa11.54□□□□□ -0.56
HDGFL3-201ENST00000299633 RGS18Q9NS28 235 aa11.54□□□□□ -0.56
HDGFL3-201ENST00000299633 DBR1Q9UK59 544 aaKnown RBP11.54□□□□□ -0.56
HDGFL3-201ENST00000299633 MTCL1Q9Y4B5 1905 aaKnown RBP11.54□□□□□ -0.56
HDGFL3-201ENST00000299633 RGS2P41220 211 aa11.54□□□□□ -0.56
HDGFL3-201ENST00000299633 RPS8P62241 208 aaKnown RBP11.54□□□□□ -0.56
HDGFL3-201ENST00000299633 SIRT2Q8IXJ6 389 aa11.54□□□□□ -0.56
HDGFL3-201ENST00000299633 ADGRG1Q9Y653 693 aa11.54□□□□□ -0.56
HDGFL3-201ENST00000299633 NDUFB5O43674 189 aa11.54□□□□□ -0.56
HDGFL3-201ENST00000299633 SERPINB5P36952 375 aa11.54□□□□□ -0.56
HDGFL3-201ENST00000299633 GPC5P78333 572 aa11.54□□□□□ -0.56
HDGFL3-201ENST00000299633 TMEM26Q6ZUK4 368 aa11.54□□□□□ -0.56
HDGFL3-201ENST00000299633 MAFIPQ8WZ33 124 aa11.54□□□□□ -0.56
HDGFL3-201ENST00000299633 PCMTD2Q9NV79 361 aa11.54□□□□□ -0.56
HDGFL3-201ENST00000299633 SIK3Q9Y2K2 1263 aa11.54□□□□□ -0.56
HDGFL3-201ENST00000299633 TEX33O43247 280 aa11.54□□□□□ -0.56
HDGFL3-201ENST00000299633 TTC39BQ5VTQ0 682 aaPredicted RBP11.54□□□□□ -0.56
HDGFL3-201ENST00000299633 IZUMO3Q5VZ72 239 aa11.54□□□□□ -0.56
HDGFL3-201ENST00000299633 BNC2Q6ZN30 1099 aaPredicted RBP11.54□□□□□ -0.56
HDGFL3-201ENST00000299633 ZNF280BQ86YH2 543 aa11.54□□□□□ -0.56
HDGFL3-201ENST00000299633 GRIP2Q9C0E4 1043 aa11.54□□□□□ -0.56
HDGFL3-201ENST00000299633 NGRNQ9NPE2 291 aaKnown RBP11.54□□□□□ -0.56
HDGFL3-201ENST00000299633 COMMD8Q9NX08 183 aa11.54□□□□□ -0.56
HDGFL3-201ENST00000299633 SNX13Q9Y5W8 968 aa11.54□□□□□ -0.56
HDGFL3-201ENST00000299633 ABCA8O94911 1581 aa11.54□□□□□ -0.56
HDGFL3-201ENST00000299633 CAMSAP1Q5T5Y3 1602 aa11.54□□□□□ -0.56
HDGFL3-201ENST00000299633 ZNF521Q96K83 1311 aa11.54□□□□□ -0.56
HDGFL3-201ENST00000299633 A0A087WXM4 84 aa11.54□□□□□ -0.56
HDGFL3-201ENST00000299633 CYP2D7A0A087X1C5 515 aa11.54□□□□□ -0.56
HDGFL3-201ENST00000299633 PRAMEF22A3QJZ6 481 aa11.54□□□□□ -0.56
HDGFL3-201ENST00000299633 ADCY6O43306 1168 aa11.54□□□□□ -0.56
HDGFL3-201ENST00000299633 DHX34Q14147 1143 aaKnown RBP11.54□□□□□ -0.56
HDGFL3-201ENST00000299633 OR8H3Q8N146 312 aa11.54□□□□□ -0.56
HDGFL3-201ENST00000299633 TIMMDC1Q9NPL8 285 aa11.54□□□□□ -0.56
HDGFL3-201ENST00000299633 RSL24D1Q9UHA3 163 aaKnown RBP11.54□□□□□ -0.56
HDGFL3-201ENST00000299633 PKP3Q9Y446 797 aa11.54□□□□□ -0.56
HDGFL3-201ENST00000299633 ARFGEF3Q5TH69 2177 aa11.54□□□□□ -0.56
HDGFL3-201ENST00000299633 MDM4O15151 490 aa11.54□□□□□ -0.56
HDGFL3-201ENST00000299633 UTS2BQ765I0 119 aa11.54□□□□□ -0.56
HDGFL3-201ENST00000299633 AKAP1Q92667 903 aaKnown RBP eCLIP11.54□□□□□ -0.56
HDGFL3-201ENST00000299633 XPR1Q9UBH6 696 aa11.54□□□□□ -0.56
HDGFL3-201ENST00000299633 PHKG2P15735 406 aa11.54□□□□□ -0.56
HDGFL3-201ENST00000299633 IST1P53990 364 aa11.54□□□□□ -0.56
HDGFL3-201ENST00000299633 CLVS1Q8IUQ0 354 aaPredicted RBP11.54□□□□□ -0.56
HDGFL3-201ENST00000299633 SLC6A15Q9H2J7 730 aa11.54□□□□□ -0.56
HDGFL3-201ENST00000299633 RPS6KB2Q9UBS0 482 aa11.54□□□□□ -0.56
HDGFL3-201ENST00000299633 WWP2O00308 870 aa11.54□□□□□ -0.56
HDGFL3-201ENST00000299633 PRR29P0C7W0 189 aa11.54□□□□□ -0.56
HDGFL3-201ENST00000299633 ARSEP51690 589 aa11.54□□□□□ -0.56
HDGFL3-201ENST00000299633 AGBL2Q5U5Z8 902 aa11.54□□□□□ -0.56
HDGFL3-201ENST00000299633 RIC8BQ9NVN3 520 aa11.54□□□□□ -0.56
HDGFL3-201ENST00000299633 CLTCQ00610 1675 aaKnown RBP11.54□□□□□ -0.56
HDGFL3-201ENST00000299633 H0YIN7 160 aa11.54□□□□□ -0.56
HDGFL3-201ENST00000299633 CALB2P22676 271 aa11.54□□□□□ -0.56
HDGFL3-201ENST00000299633 P3H1Q32P28 736 aa11.54□□□□□ -0.56
HDGFL3-201ENST00000299633 MB21D1Q8N884 522 aa11.54□□□□□ -0.56
HDGFL3-201ENST00000299633 CDHR1Q96JP9 859 aa11.54□□□□□ -0.56
HDGFL3-201ENST00000299633 THUMPD3Q9BV44 507 aaKnown RBP11.54□□□□□ -0.56
HDGFL3-201ENST00000299633 PRMT3O60678 531 aa11.53□□□□□ -0.56
HDGFL3-201ENST00000299633 ATP6V1B2P21281 511 aa11.53□□□□□ -0.56
HDGFL3-201ENST00000299633 DUSP12Q9UNI6 340 aa11.53□□□□□ -0.56
HDGFL3-201ENST00000299633 PEX14O75381 377 aa11.53□□□□□ -0.56
HDGFL3-201ENST00000299633 CPA2P48052 419 aa11.53□□□□□ -0.56
HDGFL3-201ENST00000299633 TRMT5Q32P41 509 aaKnown RBP11.53□□□□□ -0.56
HDGFL3-201ENST00000299633 RPTNQ6XPR3 784 aa11.53□□□□□ -0.56
HDGFL3-201ENST00000299633 CDKL3Q8IVW4 592 aaPredicted RBP11.53□□□□□ -0.56
HDGFL3-201ENST00000299633 ZNF564Q8TBZ8 553 aaPredicted RBP11.53□□□□□ -0.56
HDGFL3-201ENST00000299633 TBCKQ8TEA7 893 aa11.53□□□□□ -0.56
HDGFL3-201ENST00000299633 PAGR1Q9BTK6 254 aa11.53□□□□□ -0.56
HDGFL3-201ENST00000299633 CINPQ9BW66 212 aaPredicted RBP11.53□□□□□ -0.56
HDGFL3-201ENST00000299633 SPASTQ9UBP0 616 aa11.53□□□□□ -0.56
HDGFL3-201ENST00000299633 MRPL11Q9Y3B7 192 aaKnown RBP11.53□□□□□ -0.56
HDGFL3-201ENST00000299633 RPAP1Q9BWH6 1393 aaPredicted RBP11.53□□□□□ -0.56
HDGFL3-201ENST00000299633 PSMD11O00231 422 aa11.53□□□□□ -0.56
HDGFL3-201ENST00000299633 PRKAB2O43741 272 aa11.53□□□□□ -0.56
HDGFL3-201ENST00000299633 PAICSP22234 425 aaKnown RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms