RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 MMADHCQ9H3L0 296 aaPredicted RBP17.04■□□□□ 0.32
SH3RF1-201ENST00000284637 TNFAIP8O95379 198 aa17.04■□□□□ 0.32
SH3RF1-201ENST00000284637 RAD51Q06609 339 aa17.04■□□□□ 0.32
SH3RF1-201ENST00000284637 C4orf22Q6V702 233 aa17.04■□□□□ 0.32
SH3RF1-201ENST00000284637 TMPRSS6Q8IU80 811 aa17.04■□□□□ 0.32
SH3RF1-201ENST00000284637 MREGQ8N565 214 aa17.04■□□□□ 0.32
SH3RF1-201ENST00000284637 EFCAB1Q9HAE3 211 aa17.04■□□□□ 0.32
SH3RF1-201ENST00000284637 ATAD3AQ9NVI7 634 aa17.04■□□□□ 0.32
SH3RF1-201ENST00000284637 CEMIPQ8WUJ3 1361 aa17.04■□□□□ 0.32
SH3RF1-201ENST00000284637 A0A0U1RQJ8 604 aa17.04■□□□□ 0.32
SH3RF1-201ENST00000284637 PTDSS1P48651 473 aaKnown RBP17.04■□□□□ 0.32
SH3RF1-201ENST00000284637 BLVRAP53004 296 aa17.04■□□□□ 0.32
SH3RF1-201ENST00000284637 GSCP56915 257 aaPredicted RBP17.04■□□□□ 0.32
SH3RF1-201ENST00000284637 APOBEC3FQ8IUX4 373 aaKnown RBP17.04■□□□□ 0.32
SH3RF1-201ENST00000284637 TAGLN3Q9UI15 199 aa17.04■□□□□ 0.32
SH3RF1-201ENST00000284637 OVOS2A0A0J9YW53 1432 aa17.04■□□□□ 0.32
SH3RF1-201ENST00000284637 OVOS2Q6IE36 1432 aa17.04■□□□□ 0.32
SH3RF1-201ENST00000284637 NCAM1P13591 858 aa17.03■□□□□ 0.32
SH3RF1-201ENST00000284637 ETFBP38117 255 aa17.03■□□□□ 0.32
SH3RF1-201ENST00000284637 MRPL28Q13084 256 aaKnown RBP17.03■□□□□ 0.32
SH3RF1-201ENST00000284637 PCNX4Q63HM2 1172 aa17.03■□□□□ 0.32
SH3RF1-201ENST00000284637 EFCAB12Q6NXP0 572 aa17.03■□□□□ 0.32
SH3RF1-201ENST00000284637 P3H2Q8IVL5 708 aa17.03■□□□□ 0.32
SH3RF1-201ENST00000284637 CCDC60Q8IWA6 550 aaPredicted RBP17.03■□□□□ 0.32
SH3RF1-201ENST00000284637 COQ7Q99807 217 aa17.03■□□□□ 0.32
SH3RF1-201ENST00000284637 CPS1P31327 1500 aa17.03■□□□□ 0.32
SH3RF1-201ENST00000284637 SMIM31A0A1B0GVY4 71 aa17.03■□□□□ 0.32
SH3RF1-201ENST00000284637 RXRBP28702 533 aa17.03■□□□□ 0.32
SH3RF1-201ENST00000284637 GSTA3Q16772 222 aa17.03■□□□□ 0.32
SH3RF1-201ENST00000284637 FAM83EQ2M2I3 478 aa17.03■□□□□ 0.32
SH3RF1-201ENST00000284637 ERMARDQ5T6L9 678 aa17.03■□□□□ 0.32
SH3RF1-201ENST00000284637 CCDC103Q8IW40 242 aa17.03■□□□□ 0.32
SH3RF1-201ENST00000284637 CRAMP1Q96RY5 1269 aa17.03■□□□□ 0.32
SH3RF1-201ENST00000284637 SCN3BQ9NY72 215 aa17.03■□□□□ 0.32
SH3RF1-201ENST00000284637 KPNA4O00629 521 aaPredicted RBP17.03■□□□□ 0.32
SH3RF1-201ENST00000284637 PROSCO94903 275 aa17.03■□□□□ 0.32
SH3RF1-201ENST00000284637 GNL1P36915 607 aaPredicted RBP17.03■□□□□ 0.32
SH3RF1-201ENST00000284637 ACADSBP45954 432 aa17.03■□□□□ 0.32
SH3RF1-201ENST00000284637 RPL21P46778 160 aaKnown RBP17.03■□□□□ 0.32
SH3RF1-201ENST00000284637 TMCO1Q9UM00 188 aa17.03■□□□□ 0.32
SH3RF1-201ENST00000284637 ARP10275 920 aa17.03■□□□□ 0.32
SH3RF1-201ENST00000284637 NME5P56597 212 aa17.03■□□□□ 0.32
SH3RF1-201ENST00000284637 ATP1A4Q13733 1029 aa17.03■□□□□ 0.32
SH3RF1-201ENST00000284637 CCNG2Q16589 344 aa17.03■□□□□ 0.32
SH3RF1-201ENST00000284637 BNC2Q6ZN30 1099 aaPredicted RBP17.03■□□□□ 0.32
SH3RF1-201ENST00000284637 SLC26A11Q86WA9 606 aa17.03■□□□□ 0.32
SH3RF1-201ENST00000284637 PAWRQ96IZ0 340 aaKnown RBP17.03■□□□□ 0.32
SH3RF1-201ENST00000284637 MTMR12Q9C0I1 747 aa17.03■□□□□ 0.32
SH3RF1-201ENST00000284637 TMEM165Q9HC07 324 aa17.03■□□□□ 0.32
SH3RF1-201ENST00000284637 SAR1AQ9NR31 198 aa17.03■□□□□ 0.32
SH3RF1-201ENST00000284637 DCDC2Q9UHG0 476 aa17.03■□□□□ 0.32
SH3RF1-201ENST00000284637 UNC5CO95185 931 aa17.02■□□□□ 0.32
SH3RF1-201ENST00000284637 RPL10AP62906 217 aaKnown RBP17.02■□□□□ 0.32
SH3RF1-201ENST00000284637 NT5DC1Q5TFE4 455 aa17.02■□□□□ 0.32
SH3RF1-201ENST00000284637 SPOCD1Q6ZMY3 1216 aa17.02■□□□□ 0.32
SH3RF1-201ENST00000284637 TUBGCP3Q96CW5 907 aa17.02■□□□□ 0.32
SH3RF1-201ENST00000284637 DCUN1D1Q96GG9 259 aa17.02■□□□□ 0.32
SH3RF1-201ENST00000284637 ECSITQ9BQ95 431 aa17.02■□□□□ 0.32
SH3RF1-201ENST00000284637 ZNF556Q9HAH1 456 aa17.02■□□□□ 0.32
SH3RF1-201ENST00000284637 ZNF70Q9UC06 446 aaPredicted RBP17.02■□□□□ 0.32
SH3RF1-201ENST00000284637 SETBP1Q9Y6X0 1596 aa17.02■□□□□ 0.32
SH3RF1-201ENST00000284637 SHOX2O60902 331 aaPredicted RBP17.02■□□□□ 0.32
SH3RF1-201ENST00000284637 PSMA4P25789 261 aaKnown RBP17.02■□□□□ 0.32
SH3RF1-201ENST00000284637 RUNX1T1Q06455 604 aa17.02■□□□□ 0.32
SH3RF1-201ENST00000284637 KRR1Q13601 381 aaKnown RBP17.02■□□□□ 0.32
SH3RF1-201ENST00000284637 AMHR2Q16671 573 aa17.02■□□□□ 0.32
SH3RF1-201ENST00000284637 OR6J1Q8NGC5 347 aa17.02■□□□□ 0.32
SH3RF1-201ENST00000284637 DUSP9Q99956 384 aaKnown RBP17.02■□□□□ 0.32
SH3RF1-201ENST00000284637 TRIM45Q9H8W5 580 aaPredicted RBP17.02■□□□□ 0.32
SH3RF1-201ENST00000284637 CTSHP09668 335 aa17.02■□□□□ 0.31
SH3RF1-201ENST00000284637 ZNF23P17027 643 aa17.02■□□□□ 0.31
SH3RF1-201ENST00000284637 PSMC6P62333 389 aa17.02■□□□□ 0.31
SH3RF1-201ENST00000284637 SPDYCQ5MJ68 293 aa17.02■□□□□ 0.31
SH3RF1-201ENST00000284637 MARK2Q7KZI7 788 aaKnown RBP17.02■□□□□ 0.31
SH3RF1-201ENST00000284637 ZNF720Q7Z2F6 126 aa17.02■□□□□ 0.31
SH3RF1-201ENST00000284637 EMC1Q8N766 993 aa17.02■□□□□ 0.31
SH3RF1-201ENST00000284637 KAT2BQ92831 832 aa17.02■□□□□ 0.31
SH3RF1-201ENST00000284637 UBAP1Q9NZ09 502 aa17.02■□□□□ 0.31
SH3RF1-201ENST00000284637 CDV3Q9UKY7 258 aaKnown RBP17.02■□□□□ 0.31
SH3RF1-201ENST00000284637 C5orf58C9J3I9 102 aa17.02■□□□□ 0.31
SH3RF1-201ENST00000284637 CHRM3P20309 590 aa17.02■□□□□ 0.31
SH3RF1-201ENST00000284637 APOL5Q9BWW9 433 aa17.02■□□□□ 0.31
SH3RF1-201ENST00000284637 CHST12Q9NRB3 414 aa17.02■□□□□ 0.31
SH3RF1-201ENST00000284637 GALNT8Q9NY28 637 aa17.02■□□□□ 0.31
SH3RF1-201ENST00000284637 ADGRB3O60242 1522 aa17.02■□□□□ 0.31
SH3RF1-201ENST00000284637 USP1O94782 785 aa17.01■□□□□ 0.31
SH3RF1-201ENST00000284637 RALBP11234 206 aa17.01■□□□□ 0.31
SH3RF1-201ENST00000284637 PPP4CP60510 307 aa17.01■□□□□ 0.31
SH3RF1-201ENST00000284637 TRIM74Q86UV6 250 aa17.01■□□□□ 0.31
SH3RF1-201ENST00000284637 TRIM73Q86UV7 250 aa17.01■□□□□ 0.31
SH3RF1-201ENST00000284637 EXD1Q8NHP7 514 aa17.01■□□□□ 0.31
SH3RF1-201ENST00000284637 ACTL9Q8TC94 416 aa17.01■□□□□ 0.31
SH3RF1-201ENST00000284637 THUMPD3Q9BV44 507 aaKnown RBP17.01■□□□□ 0.31
SH3RF1-201ENST00000284637 HPS4Q9NQG7 708 aa17.01■□□□□ 0.31
SH3RF1-201ENST00000284637 RIC8BQ9NVN3 520 aa17.01■□□□□ 0.31
SH3RF1-201ENST00000284637 SLC24A2Q9UI40 661 aa17.01■□□□□ 0.31
SH3RF1-201ENST00000284637 CAB39Q9Y376 341 aaPredicted RBP17.01■□□□□ 0.31
SH3RF1-201ENST00000284637 SPDYE5A6NIY4 337 aa17.01■□□□□ 0.31
SH3RF1-201ENST00000284637 SDR42E2A6NKP2 422 aa17.01■□□□□ 0.31
SH3RF1-201ENST00000284637 DLGAP3O95886 979 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms