RNA–Protein interactions for RNA: ENSMUST00000003645.8

Ercc1-201, Transcript of DNA excision repair protein ERCC-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-201ENSMUST00000003645 NeblQ0II04 452 aa15.46■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Olfml2bQ3V1G4 746 aa15.46■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Cfhr2Q4LDF6 332 aa15.46■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Klra5Q60652 266 aa15.46■□□□□ 0.07
Ercc1-201ENSMUST00000003645 TfrcQ62351 763 aaKnown RBP15.46■□□□□ 0.07
Ercc1-201ENSMUST00000003645 DbhQ64237 622 aa15.46■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Mon1aQ6PDG8 556 aa15.46■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Casd1Q7TN73 797 aa15.46■□□□□ 0.07
Ercc1-201ENSMUST00000003645 R3hdm2Q80TM6 1044 aaKnown RBP15.46■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Cfap100Q80VN0 613 aa15.46■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Pdcd2lQ8C5N5 364 aa15.46■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Q922M7 232 aa15.46■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Rab30Q923S9 203 aa15.46■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Ssr1Q9CY50 286 aaKnown RBP15.46■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Dlgap1Q9D415 992 aa15.46■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Llcfc1Q9D9P8 108 aa15.46■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Dclk1Q9JLM8 756 aa15.46■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Tp53bp1P70399 1969 aa15.46■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Rtl9Q32KG4 1339 aa15.45■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Ism1A2ATD1 454 aa15.45■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Slc35g2D3YVE8 412 aa15.45■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Gm21293E9Q4G9 266 aa15.45■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Olfr731F8VQB9 326 aa15.45■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Tagap1P0CAX8 505 aa15.45■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Cd44P15379 778 aa15.45■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Ptpn22P29352 802 aa15.45■□□□□ 0.06
Ercc1-201ENSMUST00000003645 CkbQ04447 381 aa15.45■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Ccdc61Q3UJV1 511 aa15.45■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Odr4Q4PJX1 447 aa15.45■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Cntn2Q61330 1040 aa15.45■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Fgfr1opQ66JX5 399 aa15.45■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Ttyh3Q6P5F7 524 aa15.45■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Olfr1415Q7TQS4 311 aa15.45■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Plxna4Q80UG2 1893 aa15.45■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Bank1Q80VH0 783 aa15.45■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Camta2Q80Y50 1208 aa15.45■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Snip1Q8BIZ6 383 aaKnown RBP15.45■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Fbxo38Q8BMI0 1194 aa15.45■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Slco2b1Q8BXB6 683 aa15.45■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Samd3Q8C4H2 520 aa15.45■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Angel1Q8VCU0 667 aa15.45■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Olfr1416Q8VGU4 312 aa15.45■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Acsl3Q9CZW4 720 aaKnown RBP15.45■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Mrpl4Q9DCU6 294 aaKnown RBP15.45■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Scn5aQ9JJV9 2019 aa15.45■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Ankrd2Q9WV06 328 aa15.45■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Skint6A7XUZ6 1240 aa15.44■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Zfp472B0V2W5 534 aa15.44■□□□□ 0.06
Ercc1-201ENSMUST00000003645 D3Z070 196 aa15.44■□□□□ 0.06
Ercc1-201ENSMUST00000003645 CraddO88843 199 aa15.44■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Fcer2P20693 331 aa15.44■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Ccl5P30882 91 aa15.44■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Cdkn1cP49919 348 aa15.44■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Hoxd13P70217 339 aa15.44■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Hrh2P97292 397 aa15.44■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Ap5z1Q3U829 807 aa15.44■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Erich4Q3UNU4 136 aa15.44■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Grxcr1Q50H32 290 aa15.44■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Ctc1Q5SUQ9 1212 aa15.44■□□□□ 0.06
Ercc1-201ENSMUST00000003645 LpoQ5SW46 710 aa15.44■□□□□ 0.06
Ercc1-201ENSMUST00000003645 CttnQ60598 546 aaKnown RBP15.44■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Cldn11Q60771 207 aa15.44■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Kpna1Q60960 538 aa15.44■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Ltbp3Q61810 1268 aa15.44■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Trim37Q6PCX9 961 aa15.44■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Paqr9Q6TCG2 375 aa15.44■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Fam102aQ78T81 392 aa15.44■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Trnau1apQ80VC6 287 aaKnown RBP15.44■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Chn2Q80XD1 332 aa15.44■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Ankrd52Q8BTI7 1076 aa15.44■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Hmgcll1Q8JZS7 343 aa15.44■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Traf3ip2Q8N7N6 555 aa15.44■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Nup58Q8R332 587 aa15.44■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Smc1aQ9CU62 1233 aaKnown RBP15.44■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Raver1Q9CW46 748 aaKnown RBP15.44■□□□□ 0.06
Ercc1-201ENSMUST00000003645 PgcQ9D7R7 392 aa15.44■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Adamts5Q9R001 930 aa15.44■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Igkv5-43A0A0B4J1J2 115 aa15.43■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Gm36028A0A0U1RPM1 299 aa15.43■□□□□ 0.06
Ercc1-201ENSMUST00000003645 5830411N06RikB3F5L4 1112 aa15.43■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Daw1D3Z7A5 415 aa15.43■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Gm8334F7CD45 553 aa15.43■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Mroh9G5E8L9 891 aa15.43■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Gm7694J3QNH8 270 aa15.43■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Hes2O54792 157 aa15.43■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Wnt6P22727 364 aa15.43■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Slc11a2P49282 568 aa15.43■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Pafah1b1P63005 410 aaKnown RBP15.43■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Ttf2Q5NC05 1138 aa15.43■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Gpbp1l1Q6NZP2 473 aa15.43■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Cpa4Q6P8K8 420 aa15.43■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Mfsd14bQ8CIA9 507 aa15.43■□□□□ 0.06
Ercc1-201ENSMUST00000003645 CtbsQ8R242 366 aa15.43■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Uhrf1Q8VDF2 782 aaKnown RBP15.43■□□□□ 0.06
Ercc1-201ENSMUST00000003645 EpgnQ924X1 152 aa15.43■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Gemin2Q9CQQ4 269 aa15.43■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Golph3Q9CRA5 298 aa15.43■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Rfc5Q9D0F6 339 aa15.43■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Scamp5Q9JKD3 235 aa15.43■□□□□ 0.06
Ercc1-201ENSMUST00000003645 TfgQ9Z1A1 397 aa15.43■□□□□ 0.06
Retrieved 100 of 22,080 RNA–protein pairs in 50.1 ms