RNA–Protein interactions for RNA: tY(GUA)J2

SUP4, Transcript of Tyrosine tRNA (tRNA-Tyr), predicted by tRNAscan-SE analysis, yeast

Gene SUP4, Length 75 nt, Biotype tRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SUP4	tY(GUA)J2	YCH1	P42937	148 aa		4.5	□□□□□ -1.69
SUP4	tY(GUA)J2	YJR146W	P47174	117 aa		4.5	□□□□□ -1.69
SUP4	tY(GUA)J2	ATP15	P21306	62 aa		4.49	□□□□□ -1.69
SUP4	tY(GUA)J2	OXA1	P39952	402 aa		4.49	□□□□□ -1.69
SUP4	tY(GUA)J2	YNL217W	P40152	326 aa		4.49	□□□□□ -1.69
SUP4	tY(GUA)J2	YLR194C	Q05777	254 aa		4.49	□□□□□ -1.69
SUP4	tY(GUA)J2	TAR1	Q8TGM6	124 aa		4.49	□□□□□ -1.69
SUP4	tY(GUA)J2	TRP1	P00912	224 aa		4.48	□□□□□ -1.69
SUP4	tY(GUA)J2	RPS8A	P0CX39	200 aa	Known RBP	4.48	□□□□□ -1.69
SUP4	tY(GUA)J2	RPS8B	P0CX40	200 aa	Known RBP	4.48	□□□□□ -1.69
SUP4	tY(GUA)J2	RPL2A	P0CX45	254 aa	Known RBP	4.48	□□□□□ -1.69
SUP4	tY(GUA)J2	RPL2B	P0CX46	254 aa	Known RBP	4.48	□□□□□ -1.69
SUP4	tY(GUA)J2	RPL16A	P26784	199 aa	Known RBP	4.48	□□□□□ -1.69
SUP4	tY(GUA)J2	FIP1	P45976	327 aa		4.48	□□□□□ -1.69
SUP4	tY(GUA)J2	YOR097C	Q12274	175 aa	Predicted RBP	4.48	□□□□□ -1.69
SUP4	tY(GUA)J2	YDL022C-A	P0C5L6	82 aa		4.47	□□□□□ -1.69
SUP4	tY(GUA)J2	RPS11A	P0CX47	156 aa	Known RBP	4.47	□□□□□ -1.69
SUP4	tY(GUA)J2	RPS11B	P0CX48	156 aa	Known RBP	4.47	□□□□□ -1.69
SUP4	tY(GUA)J2	RRT13	P40042	185 aa		4.47	□□□□□ -1.69
SUP4	tY(GUA)J2	PEX17	P40155	199 aa		4.47	□□□□□ -1.69
SUP4	tY(GUA)J2	VHS2	P40463	436 aa		4.47	□□□□□ -1.69
SUP4	tY(GUA)J2	AGE2	P40529	298 aa		4.47	□□□□□ -1.69
SUP4	tY(GUA)J2	YDL186W	P48568	277 aa		4.47	□□□□□ -1.69
SUP4	tY(GUA)J2	YNR077C	P53758	84 aa		4.47	□□□□□ -1.69
SUP4	tY(GUA)J2	RUB1	Q03919	77 aa		4.47	□□□□□ -1.69
SUP4	tY(GUA)J2	ISU2	Q12056	156 aa		4.47	□□□□□ -1.69
SUP4	tY(GUA)J2	ADH1	P00330	348 aa	Known RBP	4.46	□□□□□ -1.7
SUP4	tY(GUA)J2	YHR212W-A	P0CX91	67 aa		4.46	□□□□□ -1.7
SUP4	tY(GUA)J2	POP7	P38291	140 aa		4.46	□□□□□ -1.7
SUP4	tY(GUA)J2	YBR209W	P38311	105 aa		4.46	□□□□□ -1.7
SUP4	tY(GUA)J2	MPC2	P38857	129 aa		4.46	□□□□□ -1.7
SUP4	tY(GUA)J2	YEL067C	P39978	195 aa		4.46	□□□□□ -1.7
SUP4	tY(GUA)J2	YFR035C	P43608	114 aa		4.46	□□□□□ -1.7
SUP4	tY(GUA)J2	YFR057W	P43625	151 aa		4.46	□□□□□ -1.7
SUP4	tY(GUA)J2	PMP3	P87284	55 aa		4.46	□□□□□ -1.7
SUP4	tY(GUA)J2	YPL257W	Q08974	193 aa		4.46	□□□□□ -1.7
SUP4	tY(GUA)J2	YIL002W-A	Q3E7Z5	69 aa		4.46	□□□□□ -1.7
SUP4	tY(GUA)J2	RPL18A	P0CX49	186 aa	Known RBP	4.45	□□□□□ -1.7
SUP4	tY(GUA)J2	RPL18B	P0CX50	186 aa	Known RBP	4.45	□□□□□ -1.7
SUP4	tY(GUA)J2	ARO2	P28777	376 aa	Known RBP	4.45	□□□□□ -1.7
SUP4	tY(GUA)J2	YPT53	P36019	220 aa		4.45	□□□□□ -1.7
SUP4	tY(GUA)J2	YER085C	P40058	173 aa		4.45	□□□□□ -1.7
SUP4	tY(GUA)J2	CIN5	P40917	295 aa		4.45	□□□□□ -1.7
SUP4	tY(GUA)J2	SCW10	Q04951	389 aa		4.45	□□□□□ -1.7
SUP4	tY(GUA)J2	MET32	Q12041	191 aa		4.45	□□□□□ -1.7
SUP4	tY(GUA)J2	YCL021W-A	Q96VH3	125 aa		4.45	□□□□□ -1.7
SUP4	tY(GUA)J2	YBR144C	P34215	104 aa		4.44	□□□□□ -1.7
SUP4	tY(GUA)J2	VTC1	P40046	129 aa	RIP-Chip data	4.44	□□□□□ -1.7	not detected
SUP4	tY(GUA)J2	YIL059C	P40520	121 aa		4.44	□□□□□ -1.7
SUP4	tY(GUA)J2	YGL088W	P53151	121 aa		4.44	□□□□□ -1.7
SUP4	tY(GUA)J2	LSM6	Q06406	86 aa	Known RBP	4.44	□□□□□ -1.7
SUP4	tY(GUA)J2	MSA1	Q08471	629 aa		4.44	□□□□□ -1.7
SUP4	tY(GUA)J2	YCR075W-A	Q3E830	75 aa		4.44	□□□□□ -1.7
SUP4	tY(GUA)J2	YBR126W-A	Q8TGU7	68 aa		4.44	□□□□□ -1.7
SUP4	tY(GUA)J2	RPL28	P02406	149 aa	Known RBP	4.43	□□□□□ -1.7
SUP4	tY(GUA)J2	NHP2	P32495	156 aa	Predicted RBP	4.43	□□□□□ -1.7
SUP4	tY(GUA)J2	RTG1	P32607	177 aa		4.43	□□□□□ -1.7
SUP4	tY(GUA)J2	SHU1	P38751	150 aa		4.43	□□□□□ -1.7
SUP4	tY(GUA)J2	YEL008W	P40001	126 aa		4.43	□□□□□ -1.7
SUP4	tY(GUA)J2	SLO1	Q3E784	85 aa		4.43	□□□□□ -1.7
SUP4	tY(GUA)J2	CPR1	P14832	162 aa	Known RBP	4.42	□□□□□ -1.7
SUP4	tY(GUA)J2	UGX2	P32772	223 aa		4.42	□□□□□ -1.7
SUP4	tY(GUA)J2	YPS5	P53057	165 aa		4.42	□□□□□ -1.7
SUP4	tY(GUA)J2	YGR035W-A	Q45U48	73 aa		4.42	□□□□□ -1.7
SUP4	tY(GUA)J2	CYC7	P00045	113 aa		4.41	□□□□□ -1.7
SUP4	tY(GUA)J2	QCR8	P08525	94 aa		4.41	□□□□□ -1.7
SUP4	tY(GUA)J2	CDC43	P18898	376 aa		4.41	□□□□□ -1.7
SUP4	tY(GUA)J2	MSN1	P22148	382 aa		4.41	□□□□□ -1.7
SUP4	tY(GUA)J2	YAR029W	P39549	74 aa		4.41	□□□□□ -1.7
SUP4	tY(GUA)J2	CUP1-1	P0CX80	61 aa		4.4	□□□□□ -1.71
SUP4	tY(GUA)J2	CUP1-2	P0CX81	61 aa		4.4	□□□□□ -1.71
SUP4	tY(GUA)J2	UBC5	P15732	148 aa		4.4	□□□□□ -1.71
SUP4	tY(GUA)J2	YCL042W	P25572	119 aa		4.4	□□□□□ -1.71
SUP4	tY(GUA)J2	DUT1	P33317	147 aa		4.4	□□□□□ -1.71
SUP4	tY(GUA)J2	KRE9	P39005	276 aa		4.4	□□□□□ -1.71
SUP4	tY(GUA)J2	ARC15	P40518	154 aa	RIP-Chip data	4.4	□□□□□ -1.71	not detected
SUP4	tY(GUA)J2	MRPS12	P53732	153 aa		4.4	□□□□□ -1.71
SUP4	tY(GUA)J2	YDR274C	P87283	123 aa		4.4	□□□□□ -1.71
SUP4	tY(GUA)J2	PPT2	Q12036	173 aa		4.4	□□□□□ -1.71
SUP4	tY(GUA)J2	MID2	P36027	376 aa		4.39	□□□□□ -1.71
SUP4	tY(GUA)J2	YHR130C	P38834	111 aa		4.39	□□□□□ -1.71
SUP4	tY(GUA)J2	YNL190W	P53872	204 aa		4.39	□□□□□ -1.71
SUP4	tY(GUA)J2	HPA2	Q06592	156 aa		4.39	□□□□□ -1.71
SUP4	tY(GUA)J2	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.39	□□□□□ -1.71	not detected
SUP4	tY(GUA)J2	NRG2	P38082	220 aa		4.38	□□□□□ -1.71
SUP4	tY(GUA)J2	ATX1	P38636	73 aa		4.38	□□□□□ -1.71
SUP4	tY(GUA)J2	ERI1	P62651	68 aa	Known RBP	4.38	□□□□□ -1.71
SUP4	tY(GUA)J2	YGR240C-A	Q3E786	66 aa		4.38	□□□□□ -1.71
SUP4	tY(GUA)J2	SOH1	P38633	127 aa		4.37	□□□□□ -1.71
SUP4	tY(GUA)J2	COX12	Q01519	83 aa		4.37	□□□□□ -1.71
SUP4	tY(GUA)J2	YCR001W	P25347	104 aa		4.36	□□□□□ -1.71
SUP4	tY(GUA)J2	MLF3	P32047	452 aa		4.36	□□□□□ -1.71
SUP4	tY(GUA)J2	YMR295C	Q03559	197 aa		4.36	□□□□□ -1.71
SUP4	tY(GUA)J2	YMR122W-A	Q3E842	84 aa		4.36	□□□□□ -1.71
SUP4	tY(GUA)J2	YIA6	P40556	373 aa		4.35	□□□□□ -1.71
SUP4	tY(GUA)J2	OST2	P46964	130 aa		4.35	□□□□□ -1.71
SUP4	tY(GUA)J2	EOS1	P53938	366 aa		4.35	□□□□□ -1.71
SUP4	tY(GUA)J2	COX10	P21592	462 aa		4.34	□□□□□ -1.71
SUP4	tY(GUA)J2	COX14	P39103	70 aa		4.34	□□□□□ -1.71
SUP4	tY(GUA)J2	CWP2	P43497	92 aa		4.34	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 9.5 ms