RNA–Protein interactions for RNA: snR53

snR53, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR53, Length 91 nt, Biotype snoRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR53snR53 TY2B-BQ12491 1770 aa-5.39□□□□□ -3.27
snR53snR53 TY2B-OR2Q12501 1770 aa-5.39□□□□□ -3.27
snR53snR53 RPL35AP0CX84 120 aaKnown RBP-5.39□□□□□ -3.27
snR53snR53 RPL35BP0CX85 120 aaKnown RBP-5.39□□□□□ -3.27
snR53snR53 ICY1Q04329 127 aa-5.4□□□□□ -3.27
snR53snR53 YPR202WQ08993 238 aa-5.4□□□□□ -3.27
snR53snR53 TY1B-BRQ12193 1756 aa-5.42□□□□□ -3.28
snR53snR53 MRX7P53869 86 aa-5.43□□□□□ -3.28
snR53snR53 COX12Q01519 83 aa-5.43□□□□□ -3.28
snR53snR53 CNL1Q06333 122 aa-5.43□□□□□ -3.28
snR53snR53 YCR050CP25630 102 aa-5.45□□□□□ -3.28
snR53snR53 SUI1P32911 108 aaKnown RBP-5.45□□□□□ -3.28
snR53snR53 YGL204CP53089 101 aa-5.45□□□□□ -3.28
snR53snR53 YOL118CQ08259 102 aa-5.45□□□□□ -3.28
snR53snR53 ERV14P53173 138 aa-5.46□□□□□ -3.28
snR53snR53 COX7P10174 60 aa-5.47□□□□□ -3.29
snR53snR53 LSM6Q06406 86 aaKnown RBP-5.47□□□□□ -3.29
snR53snR53 STT4P37297 1900 aa-5.48□□□□□ -3.29
snR53snR53 YIR020CP40575 100 aa-5.48□□□□□ -3.29
snR53snR53 PAU12P53343 120 aa-5.48□□□□□ -3.29
snR53snR53 PCC1Q3E833 88 aa-5.48□□□□□ -3.29
snR53snR53 INO80P53115 1489 aa-5.5□□□□□ -3.29
snR53snR53 YLR361C-AQ3E795 98 aa-5.5□□□□□ -3.29
snR53snR53 OST5Q92316 86 aa-5.51□□□□□ -3.29
snR53snR53 ACP1P32463 125 aa-5.52□□□□□ -3.29
snR53snR53 RPL22BP56628 122 aaKnown RBP-5.52□□□□□ -3.29
snR53snR53 NTE1Q04958 1679 aa-5.53□□□□□ -3.29
snR53snR53 YDR182W-AQ3E796 67 aa-5.53□□□□□ -3.29
snR53snR53 PBI2P0CT04 75 aaKnown RBP-5.54□□□□□ -3.3
snR53snR53 SPO14P36126 1683 aa-5.55□□□□□ -3.3
snR53snR53 AME1P38313 324 aa-5.55□□□□□ -3.3
snR53snR53 ARC19P33204 171 aaKnown RBP-5.56□□□□□ -3.3
snR53snR53 HUR1P45820 110 aa-5.56□□□□□ -3.3
snR53snR53 MAK3Q03503 176 aa-5.56□□□□□ -3.3
snR53snR53 GPI19Q04082 140 aa-5.56□□□□□ -3.3
snR53snR53 SNN1P48232 102 aa-5.59□□□□□ -3.3
snR53snR53 PAU24P38155 120 aa-5.6□□□□□ -3.31
snR53snR53 EDC1P53080 175 aaPredicted RBP-5.6□□□□□ -3.31
snR53snR53 PAU20Q08322 120 aa-5.6□□□□□ -3.31
snR53snR53 TY1B-MR1Q04214 1755 aa-5.61□□□□□ -3.31
snR53snR53 MPC1P53157 130 aaKnown RBP-5.63□□□□□ -3.31
snR53snR53 YIP3P53633 176 aa-5.63□□□□□ -3.31
snR53snR53 Q0032Q9ZZX7 96 aa-5.63□□□□□ -3.31
snR53snR53 SRB8P25648 1427 aa-5.64□□□□□ -3.31
snR53snR53 TY1B-NL2Q99337 1749 aaKnown RBP-5.64□□□□□ -3.31
snR53snR53 YIR021W-AQ3E739 70 aa-5.64□□□□□ -3.31
snR53snR53 DNF3Q12674 1656 aa-5.64□□□□□ -3.31
snR53snR53 YHR130CP38834 111 aa-5.65□□□□□ -3.31
snR53snR53 SNF11P38956 169 aa-5.67□□□□□ -3.32
snR53snR53 GRX3Q03835 250 aa-5.67□□□□□ -3.32
snR53snR53 TY1B-ER2Q03619 1755 aa-5.67□□□□□ -3.32
snR53snR53 TY1B-LR1Q12088 1755 aaKnown RBP-5.67□□□□□ -3.32
snR53snR53 TY1B-NL1Q12112 1755 aa-5.67□□□□□ -3.32
snR53snR53 TY1B-GR3Q12316 1755 aa-5.67□□□□□ -3.32
snR53snR53 YLR053CQ12026 108 aa-5.68□□□□□ -3.32
snR53snR53 YCR099CP25657 155 aa-5.69□□□□□ -3.32
snR53snR53 MRP17P28778 131 aa-5.69□□□□□ -3.32
snR53snR53 ELC1Q03071 99 aa-5.69□□□□□ -3.32
snR53snR53 YNR034W-AQ3E841 98 aa-5.69□□□□□ -3.32
snR53snR53 PAU2P32612 120 aa-5.7□□□□□ -3.32
snR53snR53 TIM8P57744 87 aa-5.7□□□□□ -3.32
snR53snR53 FRQ1Q06389 190 aa-5.7□□□□□ -3.32
snR53snR53 YHR138CP38841 114 aaPredicted RBP-5.71□□□□□ -3.32
snR53snR53 YOR008C-AQ3E7B9 74 aa-5.71□□□□□ -3.32
snR53snR53 VTH1P40438 1549 aa-5.71□□□□□ -3.32
snR53snR53 VTH2P40890 1549 aa-5.71□□□□□ -3.32
snR53snR53 ECM29P38737 1868 aa-5.72□□□□□ -3.32
snR53snR53 YNL042W-BQ3E7Z2 85 aa-5.72□□□□□ -3.33
snR53snR53 SPC3Q12133 184 aa-5.73□□□□□ -3.33
snR53snR53 SDH6Q3E785 79 aa-5.73□□□□□ -3.33
snR53snR53 YKL018C-AQ3E7A7 99 aa-5.73□□□□□ -3.33
snR53snR53 MOG1P47123 218 aa-5.74□□□□□ -3.33
snR53snR53 ATP7P30902 174 aa-5.75□□□□□ -3.33
snR53snR53 RPL14BP38754 138 aaKnown RBP-5.75□□□□□ -3.33
snR53snR53 CWC21Q03375 135 aaKnown RBP-5.75□□□□□ -3.33
snR53snR53 PAU19P0CE85 124 aa-5.76□□□□□ -3.33
snR53snR53 UBC5P15732 148 aa-5.76□□□□□ -3.33
snR53snR53 RPB4P20433 221 aaPredicted RBP-5.76□□□□□ -3.33
snR53snR53 PAU3P25610 124 aa-5.76□□□□□ -3.33
snR53snR53 TOM6P33448 61 aa-5.76□□□□□ -3.33
snR53snR53 YDR366CP87287 132 aa-5.76□□□□□ -3.33
snR53snR53 TVP18Q04767 167 aa-5.77□□□□□ -3.33
snR53snR53 JIP3O13555 125 aa-5.78□□□□□ -3.33
snR53snR53 YBR201C-AQ2V2Q3 67 aa-5.78□□□□□ -3.33
snR53snR53 PAU15P40585 124 aa-5.81□□□□□ -3.34
snR53snR53 DAD1Q12248 94 aa-5.81□□□□□ -3.34
snR53snR53 YOR376W-AQ3E805 51 aa-5.81□□□□□ -3.34
snR53snR53 PAU6P0CE90 120 aa-5.83□□□□□ -3.34
snR53snR53 PAU18P0CE91 120 aa-5.83□□□□□ -3.34
snR53snR53 YLR419WQ06698 1435 aaKnown RBP-5.83□□□□□ -3.34
snR53snR53 AIM19P40502 157 aa-5.84□□□□□ -3.34
snR53snR53 CSN9Q03981 162 aa-5.84□□□□□ -3.34
snR53snR53 SNA2P56508 79 aa-5.86□□□□□ -3.35
snR53snR53 TOS6P48560 102 aa-5.87□□□□□ -3.35
snR53snR53 CGR1P53188 120 aa-5.87□□□□□ -3.35
snR53snR53 GTT1P40582 234 aa-5.88□□□□□ -3.35
snR53snR53 YGR039WP53225 103 aa-5.88□□□□□ -3.35
snR53snR53 PAU1P0CE88 120 aa-5.89□□□□□ -3.35
snR53snR53 PAU14P0CE89 120 aa-5.89□□□□□ -3.35
snR53snR53 PAU8P0CE92 120 aa-5.89□□□□□ -3.35
Retrieved 100 of 5,963 RNA–protein pairs in 27.5 ms