RNA–Protein interactions for RNA: YPL176C

TRE1, Transcript of Transferrin receptor-like protein, yeastyeast

Gene TRE1, Length 2,352 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRE1YPL176C PAU21P0CE86 164 aa3.31□□□□□ -1.88
TRE1YPL176C PAU22P0CE87 164 aa3.31□□□□□ -1.88
TRE1YPL176C YHR213WP0CI67 198 aa3.31□□□□□ -1.88
TRE1YPL176C RPA12P32529 125 aaKnown RBP3.31□□□□□ -1.88
TRE1YPL176C PAU24P38155 120 aa3.31□□□□□ -1.88
TRE1YPL176C PIR1Q03178 341 aa3.31□□□□□ -1.88
TRE1YPL176C PAU19P0CE85 124 aa3.3□□□□□ -1.88
TRE1YPL176C PAU3P25610 124 aa3.3□□□□□ -1.88
TRE1YPL176C HSP10P38910 106 aa3.3□□□□□ -1.88
TRE1YPL176C HSP26P15992 214 aaKnown RBP RIP-Chip data3.3□□□□□ -1.88not detected
TRE1YPL176C PPT2Q12036 173 aa3.3□□□□□ -1.88
TRE1YPL176C FAS1P07149 2051 aaKnown RBP3.3□□□□□ -1.88
TRE1YPL176C YKR032WP36127 104 aa3.29□□□□□ -1.88
TRE1YPL176C GRX5Q02784 150 aa3.29□□□□□ -1.88
TRE1YPL176C MSB2P32334 1306 aa3.29□□□□□ -1.88
TRE1YPL176C KRE9P39005 276 aa3.29□□□□□ -1.88
TRE1YPL176C SWM2P40342 146 aa3.29□□□□□ -1.88
TRE1YPL176C YJL027CP47063 138 aaPredicted RBP3.29□□□□□ -1.88
TRE1YPL176C YGL149WP53116 101 aa3.29□□□□□ -1.88
TRE1YPL176C MRPS16Q02608 121 aa3.29□□□□□ -1.88
TRE1YPL176C YPR013CQ12145 317 aa3.28□□□□□ -1.88
TRE1YPL176C RPS25AQ3E792 108 aaPredicted RBP3.28□□□□□ -1.88
TRE1YPL176C FKS1P38631 1876 aaKnown RBP3.28□□□□□ -1.88
TRE1YPL176C GCV3P39726 170 aaPredicted RBP3.27□□□□□ -1.89
TRE1YPL176C BOL2P53082 120 aa3.27□□□□□ -1.89
TRE1YPL176C YML079WQ03629 201 aa3.27□□□□□ -1.89
TRE1YPL176C ICY1Q04329 127 aa3.27□□□□□ -1.89
TRE1YPL176C YDR119W-AQ2V2P9 66 aa3.27□□□□□ -1.89
TRE1YPL176C DCV1P43595 202 aa3.27□□□□□ -1.89
TRE1YPL176C YIL134C-AQ45U18 67 aa3.27□□□□□ -1.89
TRE1YPL176C TAO3P40468 2376 aa3.27□□□□□ -1.89
TRE1YPL176C ATX1P38636 73 aa3.26□□□□□ -1.89
TRE1YPL176C YGR269WP40326 108 aa3.26□□□□□ -1.89
TRE1YPL176C RPL22BP56628 122 aaKnown RBP3.26□□□□□ -1.89
TRE1YPL176C YIL014C-AQ02598 104 aa3.26□□□□□ -1.89
TRE1YPL176C NAT5Q08689 176 aa3.26□□□□□ -1.89
TRE1YPL176C OST5Q92316 86 aa3.26□□□□□ -1.89
TRE1YPL176C YLR236CA0A023PZG4 107 aa3.26□□□□□ -1.89
TRE1YPL176C RPS23AP0CX29 145 aaKnown RBP3.26□□□□□ -1.89
TRE1YPL176C RPS23BP0CX30 145 aa3.26□□□□□ -1.89
TRE1YPL176C MRPS9P38120 278 aa3.26□□□□□ -1.89
TRE1YPL176C CUE4Q04201 117 aaPredicted RBP3.26□□□□□ -1.89
TRE1YPL176C PCC1Q3E833 88 aa3.26□□□□□ -1.89
TRE1YPL176C TEL1P38110 2787 aa3.26□□□□□ -1.89
TRE1YPL176C MLP1Q02455 1875 aaKnown RBP3.26□□□□□ -1.89
TRE1YPL176C TOM6P33448 61 aa3.25□□□□□ -1.89
TRE1YPL176C ATG8P38182 117 aaRIP-Chip data3.25□□□□□ -1.89not detected
TRE1YPL176C RSM18P40033 138 aa3.25□□□□□ -1.89
TRE1YPL176C YFL051CP43552 160 aa3.25□□□□□ -1.89
TRE1YPL176C BRP1P53194 125 aa3.25□□□□□ -1.89
TRE1YPL176C PAU16P35994 123 aa3.25□□□□□ -1.89
TRE1YPL176C PAU15P40585 124 aa3.25□□□□□ -1.89
TRE1YPL176C POP3P53833 195 aaPredicted RBP3.25□□□□□ -1.89
TRE1YPL176C RPL33BP41056 107 aaKnown RBP3.24□□□□□ -1.89
TRE1YPL176C AVO2Q04749 426 aa3.24□□□□□ -1.89
TRE1YPL176C UTR5P32630 166 aa3.24□□□□□ -1.89
TRE1YPL176C YIR020CP40575 100 aa3.24□□□□□ -1.89
TRE1YPL176C PAU5P43575 122 aa3.24□□□□□ -1.89
TRE1YPL176C ICS3P47034 131 aa3.24□□□□□ -1.89
TRE1YPL176C YPR195CQ06594 109 aa3.24□□□□□ -1.89
TRE1YPL176C YPR153WQ06537 140 aa3.23□□□□□ -1.89
TRE1YPL176C YPR145C-AQ2V2P0 78 aa3.23□□□□□ -1.89
TRE1YPL176C YNR034W-AQ3E841 98 aa3.23□□□□□ -1.89
TRE1YPL176C FAB1P34756 2278 aa3.22□□□□□ -1.89
TRE1YPL176C RTC6O14464 93 aa3.22□□□□□ -1.89
TRE1YPL176C UTH1P36135 365 aa3.22□□□□□ -1.89
TRE1YPL176C RGM1Q00453 211 aa3.22□□□□□ -1.89
TRE1YPL176C PAU23Q07987 124 aa3.22□□□□□ -1.89
TRE1YPL176C PAU17Q12370 124 aa3.22□□□□□ -1.89
TRE1YPL176C YBR292CP38357 123 aa3.22□□□□□ -1.89
TRE1YPL176C YFL012WP43580 148 aa3.22□□□□□ -1.89
TRE1YPL176C CMC4Q3E7A9 73 aa3.22□□□□□ -1.89
TRE1YPL176C TOR2P32600 2474 aaKnown RBP3.21□□□□□ -1.89
TRE1YPL176C RPL22AP05749 121 aaKnown RBP3.21□□□□□ -1.9
TRE1YPL176C COX23P38824 151 aa3.21□□□□□ -1.9
TRE1YPL176C YNL198CP40166 100 aa3.21□□□□□ -1.9
TRE1YPL176C YPI1P43587 155 aa3.21□□□□□ -1.9
TRE1YPL176C IMP2P46972 177 aa3.21□□□□□ -1.9
TRE1YPL176C YLR194CQ05777 254 aa3.21□□□□□ -1.9
TRE1YPL176C RPS19AP07280 144 aaKnown RBP3.2□□□□□ -1.9
TRE1YPL176C RPS19BP07281 144 aaPredicted RBP3.2□□□□□ -1.9
TRE1YPL176C SOD1P00445 154 aaKnown RBP3.2□□□□□ -1.9
TRE1YPL176C RPS22AP0C0W1 130 aaKnown RBP3.2□□□□□ -1.9
TRE1YPL176C RPB7P34087 171 aa3.2□□□□□ -1.9
TRE1YPL176C YHL005CP38752 130 aa3.2□□□□□ -1.9
TRE1YPL176C CIS3P47001 227 aa3.2□□□□□ -1.9
TRE1YPL176C TMC1Q08422 150 aaPredicted RBP3.2□□□□□ -1.9
TRE1YPL176C VPS13Q07878 3144 aa3.2□□□□□ -1.9
TRE1YPL176C LST8P41318 303 aa3.19□□□□□ -1.9
TRE1YPL176C MIC27P50945 234 aa3.19□□□□□ -1.9
TRE1YPL176C DAD4P69851 72 aa3.19□□□□□ -1.9
TRE1YPL176C YDL157CQ12082 118 aa3.19□□□□□ -1.9
TRE1YPL176C ECM29P38737 1868 aa3.19□□□□□ -1.9
TRE1YPL176C RIF1P29539 1916 aa3.19□□□□□ -1.9
TRE1YPL176C SRX1P36077 127 aa3.19□□□□□ -1.9
TRE1YPL176C MET31Q03081 177 aa3.19□□□□□ -1.9
TRE1YPL176C COX8P04039 78 aa3.18□□□□□ -1.9
TRE1YPL176C CYT2Q00873 224 aa3.18□□□□□ -1.9
TRE1YPL176C YDR381C-AQ3E6R5 114 aa3.18□□□□□ -1.9
TRE1YPL176C RPL26AP05743 127 aaKnown RBP3.18□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 59.3 ms