RNA–Protein interactions for RNA: YOR378W

AMF1, Transcript of Putative paralog of ATR1, yeastyeast

Gene AMF1, Length 1,548 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AMF1YOR378W RPL16AP26784 199 aaKnown RBP6.19□□□□□ -1.42
AMF1YOR378W MRP49P32388 137 aa6.19□□□□□ -1.42
AMF1YOR378W YJR146WP47174 117 aa6.19□□□□□ -1.42
AMF1YOR378W APS1P35181 156 aa6.18□□□□□ -1.42
AMF1YOR378W FYV4P38783 130 aaPredicted RBP6.18□□□□□ -1.42
AMF1YOR378W ERI1P62651 68 aaKnown RBP6.18□□□□□ -1.42
AMF1YOR378W YLR112WQ12130 139 aa6.18□□□□□ -1.42
AMF1YOR378W ADH2P00331 348 aaKnown RBP6.17□□□□□ -1.42
AMF1YOR378W TRP1P00912 224 aa6.17□□□□□ -1.42
AMF1YOR378W FUN14P18411 198 aa6.17□□□□□ -1.42
AMF1YOR378W YBR209WP38311 105 aa6.17□□□□□ -1.42
AMF1YOR378W HAC1P41546 238 aa6.17□□□□□ -1.42
AMF1YOR378W YMR103CQ04436 120 aa6.17□□□□□ -1.42
AMF1YOR378W COA3Q3E7B2 85 aa6.17□□□□□ -1.42
AMF1YOR378W YMR122W-AQ3E842 84 aa6.17□□□□□ -1.42
AMF1YOR378W AIM29P36154 155 aa6.16□□□□□ -1.42
AMF1YOR378W ARC15P40518 154 aaRIP-Chip data6.16□□□□□ -1.42not detected
AMF1YOR378W YIL059CP40520 121 aa6.15□□□□□ -1.42
AMF1YOR378W FYV7Q12247 151 aa6.15□□□□□ -1.42
AMF1YOR378W SEC11P15367 167 aa6.15□□□□□ -1.43
AMF1YOR378W NUP42P49686 430 aaKnown RBP6.15□□□□□ -1.43
AMF1YOR378W YGL088WP53151 121 aa6.15□□□□□ -1.43
AMF1YOR378W SCS22Q6Q595 175 aa6.15□□□□□ -1.43
AMF1YOR378W RPL31AP0C2H8 113 aaKnown RBP6.14□□□□□ -1.43
AMF1YOR378W SPC1P46965 94 aa6.14□□□□□ -1.43
AMF1YOR378W YGL015CP33199 130 aa6.13□□□□□ -1.43
AMF1YOR378W YKL070WP36087 169 aa6.13□□□□□ -1.43
AMF1YOR378W MSL1P40567 111 aaPredicted RBP6.13□□□□□ -1.43
AMF1YOR378W YGL230CP53074 147 aa6.13□□□□□ -1.43
AMF1YOR378W YCL021W-AQ96VH3 125 aa6.12□□□□□ -1.43
AMF1YOR378W YCR007CP25354 239 aa6.11□□□□□ -1.43
AMF1YOR378W YEL008WP40001 126 aa6.11□□□□□ -1.43
AMF1YOR378W BET5Q03630 159 aa6.11□□□□□ -1.43
AMF1YOR378W YDL157CQ12082 118 aa6.11□□□□□ -1.43
AMF1YOR378W ATP5P09457 212 aa6.1□□□□□ -1.43
AMF1YOR378W YKL044WP36092 106 aa6.1□□□□□ -1.43
AMF1YOR378W RPR2P40571 144 aa6.1□□□□□ -1.43
AMF1YOR378W NAT5Q08689 176 aa6.1□□□□□ -1.43
AMF1YOR378W YPR010C-AA5Z2X5 72 aa6.09□□□□□ -1.44
AMF1YOR378W RPL33AP05744 107 aaKnown RBP6.09□□□□□ -1.44
AMF1YOR378W ATP15P21306 62 aa6.09□□□□□ -1.44
AMF1YOR378W RPL33BP41056 107 aaKnown RBP6.09□□□□□ -1.44
AMF1YOR378W YPL261CQ08976 102 aa6.09□□□□□ -1.44
AMF1YOR378W DFM1Q12743 341 aaKnown RBP6.09□□□□□ -1.44
AMF1YOR378W YDL085C-AQ3E7B7 68 aaKnown RBP6.09□□□□□ -1.44
AMF1YOR378W YAR029WP39549 74 aa6.08□□□□□ -1.44
AMF1YOR378W ERG28P40030 148 aa6.08□□□□□ -1.44
AMF1YOR378W YER085CP40058 173 aa6.08□□□□□ -1.44
AMF1YOR378W RPL32P38061 130 aaKnown RBP6.06□□□□□ -1.44
AMF1YOR378W AIM11P87275 137 aa6.06□□□□□ -1.44
AMF1YOR378W YLR194CQ05777 254 aa6.06□□□□□ -1.44
AMF1YOR378W PBA1Q05778 276 aa6.06□□□□□ -1.44
AMF1YOR378W SAE3P89114 91 aa6.05□□□□□ -1.44
AMF1YOR378W YMR320WQ04897 101 aa6.05□□□□□ -1.44
AMF1YOR378W ENV10Q99382 181 aa6.05□□□□□ -1.44
AMF1YOR378W UIP3P39547 235 aa6.04□□□□□ -1.44
AMF1YOR378W YPL073CP40323 161 aa6.04□□□□□ -1.44
AMF1YOR378W YIL002W-AQ3E7Z5 69 aa6.04□□□□□ -1.44
AMF1YOR378W YLL066W-BQ8TGJ7 56 aa6.04□□□□□ -1.44
AMF1YOR378W RTC6O14464 93 aa6.04□□□□□ -1.44
AMF1YOR378W YKR041WP36134 250 aa6.04□□□□□ -1.44
AMF1YOR378W YDL022C-AP0C5L6 82 aa6.03□□□□□ -1.44
AMF1YOR378W YBR219CP38317 127 aa6.03□□□□□ -1.44
AMF1YOR378W PEX17P40155 199 aa6.03□□□□□ -1.44
AMF1YOR378W GLC8P41818 229 aa6.03□□□□□ -1.44
AMF1YOR378W DIF1O13577 133 aa6.02□□□□□ -1.45
AMF1YOR378W SHU1P38751 150 aa6.02□□□□□ -1.45
AMF1YOR378W SVP26P38869 228 aa6.02□□□□□ -1.45
AMF1YOR378W YMR295CQ03559 197 aa6.02□□□□□ -1.45
AMF1YOR378W PAU23Q07987 124 aa6.02□□□□□ -1.45
AMF1YOR378W PAU17Q12370 124 aa6.02□□□□□ -1.45
AMF1YOR378W YDR115WQ04598 105 aa6.01□□□□□ -1.45
AMF1YOR378W RPL18AP0CX49 186 aaKnown RBP6□□□□□ -1.45
AMF1YOR378W RPL18BP0CX50 186 aaKnown RBP6□□□□□ -1.45
AMF1YOR378W TMA7Q3E764 64 aaKnown RBP6□□□□□ -1.45
AMF1YOR378W IGO2Q9P305 131 aa6□□□□□ -1.45
AMF1YOR378W RPL11AP0C0W9 174 aaKnown RBP5.99□□□□□ -1.45
AMF1YOR378W RPF1P38805 295 aaKnown RBP5.99□□□□□ -1.45
AMF1YOR378W RPC10P40422 70 aa5.99□□□□□ -1.45
AMF1YOR378W RPL11BQ3E757 174 aaPredicted RBP5.99□□□□□ -1.45
AMF1YOR378W YMR175W-AQ3E766 64 aa5.99□□□□□ -1.45
AMF1YOR378W YEL067CP39978 195 aa5.99□□□□□ -1.45
AMF1YOR378W CIN5P40917 295 aa5.99□□□□□ -1.45
AMF1YOR378W PPT2Q12036 173 aa5.99□□□□□ -1.45
AMF1YOR378W QCR8P08525 94 aa5.98□□□□□ -1.45
AMF1YOR378W YNR077CP53758 84 aa5.98□□□□□ -1.45
AMF1YOR378W HAP3P13434 144 aa5.97□□□□□ -1.45
AMF1YOR378W COX14P39103 70 aa5.97□□□□□ -1.45
AMF1YOR378W RRT15Q3E811 62 aa5.97□□□□□ -1.45
AMF1YOR378W MRPS12P53732 153 aa5.96□□□□□ -1.46
AMF1YOR378W VTS1Q08831 523 aaKnown RBP RIP-Chip data5.96□□□□□ -1.46not detected
AMF1YOR378W YAL065CO13511 128 aa5.95□□□□□ -1.46
AMF1YOR378W ADH1P00330 348 aaKnown RBP5.95□□□□□ -1.46
AMF1YOR378W RPL28P02406 149 aaKnown RBP5.95□□□□□ -1.46
AMF1YOR378W TOA2P32774 122 aa5.95□□□□□ -1.46
AMF1YOR378W YAL064WP39711 94 aa5.95□□□□□ -1.46
AMF1YOR378W CWC27Q02770 301 aa5.95□□□□□ -1.46
AMF1YOR378W VTC1P40046 129 aaRIP-Chip data5.94□□□□□ -1.46 RIP-Chip
AMF1YOR378W YML079WQ03629 201 aa5.94□□□□□ -1.46
AMF1YOR378W YLR363W-AQ3E747 85 aa5.94□□□□□ -1.46
Retrieved 100 of 5,963 RNA–protein pairs in 61.2 ms