RNA–Protein interactions for RNA: YNL207W

RIO2, Essential serine kinase involved in the processing of 20S pre-rRNA, yeast

Gene RIO2, Length 1,278 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RIO2	YNL207W	COA4	Q05809	96 aa		0.63	□□□□□ -2.31
RIO2	YNL207W	FIT3	Q08907	204 aa		0.63	□□□□□ -2.31
RIO2	YNL207W	ATP14	Q12349	124 aa		0.63	□□□□□ -2.31
RIO2	YNL207W	URA2	P07259	2214 aa	Known RBP	0.62	□□□□□ -2.31
RIO2	YNL207W	YJL197C-A	P0C5P0	93 aa		0.62	□□□□□ -2.31
RIO2	YNL207W	PRS3	P38689	320 aa	Known RBP	0.62	□□□□□ -2.31
RIO2	YNL207W	YIL086C	P40503	102 aa		0.62	□□□□□ -2.31
RIO2	YNL207W	EMC4	P53073	190 aa		0.62	□□□□□ -2.31
RIO2	YNL207W	YPL067C	Q02754	198 aa		0.62	□□□□□ -2.31
RIO2	YNL207W	COF1	Q03048	143 aa	Known RBP	0.62	□□□□□ -2.31
RIO2	YNL207W	SPC3	Q12133	184 aa		0.62	□□□□□ -2.31
RIO2	YNL207W	YOR032W-A	Q8TGS1	66 aa		0.62	□□□□□ -2.31
RIO2	YNL207W	LAA1	P39526	2014 aa		0.62	□□□□□ -2.31
RIO2	YNL207W	HAP3	P13434	144 aa		0.61	□□□□□ -2.31
RIO2	YNL207W	BRP1	P53194	125 aa		0.61	□□□□□ -2.31
RIO2	YNL207W	YOR385W	Q08909	290 aa		0.61	□□□□□ -2.31
RIO2	YNL207W	YGR035W-A	Q45U48	73 aa		0.61	□□□□□ -2.31
RIO2	YNL207W	HUG1	Q6Q5K6	68 aa		0.61	□□□□□ -2.31
RIO2	YNL207W	MED11	Q99278	115 aa		0.61	□□□□□ -2.31
RIO2	YNL207W	MYO1	P08964	1928 aa		0.6	□□□□□ -2.31
RIO2	YNL207W	MRPL11	P36521	249 aa	Predicted RBP	0.6	□□□□□ -2.31
RIO2	YNL207W	SMD2	Q06217	110 aa	Known RBP	0.6	□□□□□ -2.31
RIO2	YNL207W	YLR307C-A	Q3E825	87 aa		0.6	□□□□□ -2.31
RIO2	YNL207W	RPS1A	P33442	255 aa	Known RBP	0.59	□□□□□ -2.31
RIO2	YNL207W	UTP11	P34247	250 aa	Predicted RBP	0.59	□□□□□ -2.31
RIO2	YNL207W	MPC1	P53157	130 aa	Known RBP	0.59	□□□□□ -2.31
RIO2	YNL207W	SDH7	Q04401	133 aa		0.59	□□□□□ -2.31
RIO2	YNL207W	YOR034C-A	Q3E735	80 aa		0.59	□□□□□ -2.31
RIO2	YNL207W	YGL149W	P53116	101 aa		0.58	□□□□□ -2.32
RIO2	YNL207W	YLR296W	Q05898	108 aa		0.58	□□□□□ -2.32
RIO2	YNL207W	MOT1	P32333	1867 aa		0.57	□□□□□ -2.32
RIO2	YNL207W	YFR010W-A	P0C5N0	62 aa		0.57	□□□□□ -2.32
RIO2	YNL207W	YLR157W-E	P0CF00	54 aa		0.57	□□□□□ -2.32
RIO2	YNL207W	GSP1	P32835	219 aa	Known RBP	0.57	□□□□□ -2.32
RIO2	YNL207W	QCR10	P37299	77 aa		0.57	□□□□□ -2.32
RIO2	YNL207W	YIR020C	P40575	100 aa		0.57	□□□□□ -2.32
RIO2	YNL207W	YMR320W	Q04897	101 aa		0.57	□□□□□ -2.32
RIO2	YNL207W	LDB18	Q07887	179 aa		0.57	□□□□□ -2.32
RIO2	YNL207W	Q0144	Q9ZZW2	109 aa		0.57	□□□□□ -2.32
RIO2	YNL207W	CYC2	P38909	366 aa		0.56	□□□□□ -2.32
RIO2	YNL207W	HSP10	P38910	106 aa		0.56	□□□□□ -2.32
RIO2	YNL207W	GIM4	P40005	111 aa	Known RBP	0.56	□□□□□ -2.32
RIO2	YNL207W	QCR6	P00127	147 aa		0.55	□□□□□ -2.32
RIO2	YNL207W	PAU21	P0CE86	164 aa		0.55	□□□□□ -2.32
RIO2	YNL207W	PAU22	P0CE87	164 aa		0.55	□□□□□ -2.32
RIO2	YNL207W	MRPL31	P14063	131 aa	Predicted RBP	0.55	□□□□□ -2.32
RIO2	YNL207W	RPS27A	P35997	82 aa	Known RBP	0.55	□□□□□ -2.32
RIO2	YNL207W	YBR013C	P38215	129 aa		0.55	□□□□□ -2.32
RIO2	YNL207W	RPS27B	P38711	82 aa		0.55	□□□□□ -2.32
RIO2	YNL207W	GAT4	P40569	121 aa		0.55	□□□□□ -2.32
RIO2	YNL207W	MIC27	P50945	234 aa		0.55	□□□□□ -2.32
RIO2	YNL207W	RTR2	Q12378	196 aa		0.55	□□□□□ -2.32
RIO2	YNL207W	YSF3	P0C074	85 aa	Predicted RBP	0.54	□□□□□ -2.32
RIO2	YNL207W	YFR035C	P43608	114 aa		0.54	□□□□□ -2.32
RIO2	YNL207W	ELC1	Q03071	99 aa		0.54	□□□□□ -2.32
RIO2	YNL207W	GTT2	Q12390	233 aa		0.54	□□□□□ -2.32
RIO2	YNL207W	AUA1	P32450	94 aa		0.53	□□□□□ -2.32
RIO2	YNL207W	TRS20	P38334	175 aa		0.53	□□□□□ -2.32
RIO2	YNL207W	HPM1	P40481	377 aa		0.53	□□□□□ -2.32
RIO2	YNL207W	MIX14	Q04341	121 aa		0.53	□□□□□ -2.32
RIO2	YNL207W	BPH1	P25356	2167 aa		0.52	□□□□□ -2.33
RIO2	YNL207W	RPL36B	O14455	100 aa	Known RBP	0.52	□□□□□ -2.33
RIO2	YNL207W	RPL36A	P05745	100 aa	Predicted RBP	0.52	□□□□□ -2.33
RIO2	YNL207W	YHR214C-D	P0CX93	97 aa		0.52	□□□□□ -2.33
RIO2	YNL207W	YCR050C	P25630	102 aa		0.52	□□□□□ -2.33
RIO2	YNL207W	SUA7	P29055	345 aa	Predicted RBP	0.52	□□□□□ -2.33
RIO2	YNL207W	YGR017W	P53210	297 aa		0.52	□□□□□ -2.33
RIO2	YNL207W	TIM8	P57744	87 aa		0.52	□□□□□ -2.33
RIO2	YNL207W	YNL277W-A	Q3E7Z0	62 aa		0.52	□□□□□ -2.33
RIO2	YNL207W	BLM10	P43583	2143 aa		0.52	□□□□□ -2.33
RIO2	YNL207W	ROX3	P25046	220 aa		0.51	□□□□□ -2.33
RIO2	YNL207W	AIM18	P38884	321 aa		0.51	□□□□□ -2.33
RIO2	YNL207W	CSN9	Q03981	162 aa		0.51	□□□□□ -2.33
RIO2	YNL207W	RTC6	O14464	93 aa		0.5	□□□□□ -2.33
RIO2	YNL207W	EMP24	P32803	203 aa	Known RBP	0.5	□□□□□ -2.33
RIO2	YNL207W	ICS3	P47034	131 aa		0.5	□□□□□ -2.33
RIO2	YNL207W	SWC7	Q06707	132 aa		0.5	□□□□□ -2.33
RIO2	YNL207W	FCF2	Q12035	217 aa	Predicted RBP	0.5	□□□□□ -2.33
RIO2	YNL207W	MLP1	Q02455	1875 aa	Known RBP	0.5	□□□□□ -2.33
RIO2	YNL207W	RPL14A	P36105	138 aa	Known RBP	0.49	□□□□□ -2.33
RIO2	YNL207W	AIM4	P38305	123 aa	Predicted RBP	0.49	□□□□□ -2.33
RIO2	YNL207W	RPL14B	P38754	138 aa	Known RBP	0.49	□□□□□ -2.33
RIO2	YNL207W	YAL064W	P39711	94 aa		0.49	□□□□□ -2.33
RIO2	YNL207W	PHS1	P40857	217 aa		0.49	□□□□□ -2.33
RIO2	YNL207W	SIP18	P50263	79 aa		0.49	□□□□□ -2.33
RIO2	YNL207W	YLR194C	Q05777	254 aa		0.49	□□□□□ -2.33
RIO2	YNL207W	OCA6	Q12454	224 aa		0.49	□□□□□ -2.33
RIO2	YNL207W	POR2	P40478	281 aa		0.48	□□□□□ -2.33
RIO2	YNL207W	YCL048W-A	Q2V2Q2	79 aa		0.48	□□□□□ -2.33
RIO2	YNL207W	STT4	P37297	1900 aa		0.48	□□□□□ -2.33
RIO2	YNL207W	RPS29B	P41058	56 aa	Known RBP	0.47	□□□□□ -2.33
RIO2	YNL207W	YDR278C	Q05612	105 aa		0.47	□□□□□ -2.33
RIO2	YNL207W	YIL163C	P40448	117 aa		0.46	□□□□□ -2.34
RIO2	YNL207W	YJR128W	P47162	119 aa		0.46	□□□□□ -2.34
RIO2	YNL207W	HPA2	Q06592	156 aa		0.46	□□□□□ -2.34
RIO2	YNL207W	RPS20	P38701	121 aa	Known RBP	0.45	□□□□□ -2.34
RIO2	YNL207W	MPC2	P38857	129 aa		0.45	□□□□□ -2.34
RIO2	YNL207W	RPS29A	P41057	56 aa	Known RBP	0.45	□□□□□ -2.34
RIO2	YNL207W	RPS12	P48589	143 aa	Known RBP	0.45	□□□□□ -2.34
RIO2	YNL207W	ERV14	P53173	138 aa		0.45	□□□□□ -2.34

Retrieved 100 of 5,963 RNA–protein pairs in 83.5 ms