RNA–Protein interactions for RNA: YML085C

TUB1, Transcript of Alpha-tubulin, yeast

Gene TUB1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Cellular bud, Endoplasmic reticulum, Peroxisome .

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RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TUB1	YML085C	CGR1	P53188	120 aa		5.05	□□□□□ -1.6
TUB1	YML085C	YIL014C-A	Q02598	104 aa		5.05	□□□□□ -1.6
TUB1	YML085C	GSP1	P32835	219 aa	Known RBP	5.04	□□□□□ -1.6
TUB1	YML085C	GSP2	P32836	220 aa	Known RBP	5.04	□□□□□ -1.6
TUB1	YML085C	SSS1	P35179	80 aa		5.04	□□□□□ -1.6
TUB1	YML085C	YNL200C	P40165	246 aa	Known RBP	5.04	□□□□□ -1.6
TUB1	YML085C	YDR042C	Q03205	200 aa		5.04	□□□□□ -1.6
TUB1	YML085C	PBA1	Q05778	276 aa		5.04	□□□□□ -1.6
TUB1	YML085C	YCL021W-A	Q96VH3	125 aa		5.04	□□□□□ -1.6
TUB1	YML085C	ENV10	Q99382	181 aa		5.04	□□□□□ -1.6
TUB1	YML085C	RPL16A	P26784	199 aa	Known RBP	5.03	□□□□□ -1.6
TUB1	YML085C	AIM29	P36154	155 aa		5.03	□□□□□ -1.6
TUB1	YML085C	YBR209W	P38311	105 aa		5.03	□□□□□ -1.6
TUB1	YML085C	OST3	P48439	350 aa		5.03	□□□□□ -1.6
TUB1	YML085C	YLR050C	Q12155	161 aa	Known RBP	5.03	□□□□□ -1.6
TUB1	YML085C	APS1	P35181	156 aa		5.02	□□□□□ -1.61
TUB1	YML085C	YJR146W	P47174	117 aa		5.02	□□□□□ -1.61
TUB1	YML085C	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	5.02	□□□□□ -1.61	not detected
TUB1	YML085C	HMRA2	P0CY13	119 aa		5.01	□□□□□ -1.61
TUB1	YML085C	POP3	P53833	195 aa	Predicted RBP	5.01	□□□□□ -1.61
TUB1	YML085C	RPL31A	P0C2H8	113 aa	Known RBP	5	□□□□□ -1.61
TUB1	YML085C	PAU16	P35994	123 aa		5	□□□□□ -1.61
TUB1	YML085C	MRPL11	P36521	249 aa	Predicted RBP	5	□□□□□ -1.61
TUB1	YML085C	SVP26	P38869	228 aa		5	□□□□□ -1.61
TUB1	YML085C	YER134C	P40081	178 aa		5	□□□□□ -1.61
TUB1	YML085C	PRE1	P22141	198 aa	Known RBP	4.99	□□□□□ -1.61
TUB1	YML085C	YMR320W	Q04897	101 aa		4.99	□□□□□ -1.61
TUB1	YML085C	YMR175W-A	Q3E766	64 aa		4.99	□□□□□ -1.61
TUB1	YML085C	YLL066W-B	Q8TGJ7	56 aa		4.99	□□□□□ -1.61
TUB1	YML085C	BET5	Q03630	159 aa		4.98	□□□□□ -1.61
TUB1	YML085C	YMR103C	Q04436	120 aa		4.98	□□□□□ -1.61
TUB1	YML085C	PPT2	Q12036	173 aa		4.98	□□□□□ -1.61
TUB1	YML085C	YEL008W	P40001	126 aa		4.97	□□□□□ -1.61
TUB1	YML085C	YGL088W	P53151	121 aa		4.97	□□□□□ -1.61
TUB1	YML085C	COA3	Q3E7B2	85 aa		4.97	□□□□□ -1.61
TUB1	YML085C	ANB1	P19211	157 aa		4.97	□□□□□ -1.61
TUB1	YML085C	YKL070W	P36087	169 aa		4.97	□□□□□ -1.61
TUB1	YML085C	RPC10	P40422	70 aa		4.97	□□□□□ -1.61
TUB1	YML085C	YDR115W	Q04598	105 aa		4.97	□□□□□ -1.61
TUB1	YML085C	YLR112W	Q12130	139 aa		4.97	□□□□□ -1.61
TUB1	YML085C	DFM1	Q12743	341 aa	Known RBP	4.97	□□□□□ -1.61
TUB1	YML085C	YAR023C	D6VPM8	179 aa		4.96	□□□□□ -1.62
TUB1	YML085C	YER085C	P40058	173 aa		4.96	□□□□□ -1.62
TUB1	YML085C	YDL241W	Q07738	123 aa		4.96	□□□□□ -1.62
TUB1	YML085C	YIL134C-A	Q45U18	67 aa		4.96	□□□□□ -1.62
TUB1	YML085C	YPL229W	Q99395	206 aa		4.96	□□□□□ -1.62
TUB1	YML085C	DIF1	O13577	133 aa		4.95	□□□□□ -1.62
TUB1	YML085C	FYV4	P38783	130 aa	Predicted RBP	4.95	□□□□□ -1.62
TUB1	YML085C	PEX17	P40155	199 aa		4.95	□□□□□ -1.62
TUB1	YML085C	YLR194C	Q05777	254 aa		4.95	□□□□□ -1.62
TUB1	YML085C	YKL044W	P36092	106 aa		4.94	□□□□□ -1.62
TUB1	YML085C	QCR8	P08525	94 aa		4.93	□□□□□ -1.62
TUB1	YML085C	HAP3	P13434	144 aa		4.93	□□□□□ -1.62
TUB1	YML085C	YCR007C	P25354	239 aa		4.93	□□□□□ -1.62
TUB1	YML085C	CIN5	P40917	295 aa		4.93	□□□□□ -1.62
TUB1	YML085C	HAC1	P41546	238 aa		4.93	□□□□□ -1.62
TUB1	YML085C	FYV7	Q12247	151 aa		4.93	□□□□□ -1.62
TUB1	YML085C	TPT1	Q12272	230 aa	Known RBP	4.93	□□□□□ -1.62
TUB1	YML085C	ATP15	P21306	62 aa		4.92	□□□□□ -1.62
TUB1	YML085C	RPL32	P38061	130 aa	Known RBP	4.92	□□□□□ -1.62
TUB1	YML085C	SHU1	P38751	150 aa		4.92	□□□□□ -1.62
TUB1	YML085C	VTC1	P40046	129 aa	RIP-Chip data	4.91	□□□□□ -1.62	not detected
TUB1	YML085C	LSM8	P47093	109 aa	Known RBP	4.91	□□□□□ -1.62
TUB1	YML085C	AIM11	P87275	137 aa		4.91	□□□□□ -1.62
TUB1	YML085C	YMR295C	Q03559	197 aa		4.91	□□□□□ -1.62
TUB1	YML085C	YPL261C	Q08976	102 aa		4.91	□□□□□ -1.62
TUB1	YML085C	YDR034C-A	P0C289	58 aa		4.9	□□□□□ -1.63
TUB1	YML085C	RPF1	P38805	295 aa	Known RBP	4.9	□□□□□ -1.63
TUB1	YML085C	YPR195C	Q06594	109 aa		4.9	□□□□□ -1.63
TUB1	YML085C	RRT15	Q3E811	62 aa		4.9	□□□□□ -1.63
TUB1	YML085C	MRP10	O75012	95 aa		4.89	□□□□□ -1.63
TUB1	YML085C	ADH1	P00330	348 aa	Known RBP	4.89	□□□□□ -1.63
TUB1	YML085C	COX14	P39103	70 aa		4.89	□□□□□ -1.63
TUB1	YML085C	MSL1	P40567	111 aa	Predicted RBP	4.89	□□□□□ -1.63
TUB1	YML085C	GAT4	P40569	121 aa		4.89	□□□□□ -1.63
TUB1	YML085C	SEN15	Q04675	128 aa		4.89	□□□□□ -1.63
TUB1	YML085C	YDR029W	Q12111	104 aa		4.89	□□□□□ -1.63
TUB1	YML085C	YGL041C-B	Q3E750	60 aa		4.89	□□□□□ -1.63
TUB1	YML085C	SEC11	P15367	167 aa		4.88	□□□□□ -1.63
TUB1	YML085C	TOA2	P32774	122 aa		4.88	□□□□□ -1.63
TUB1	YML085C	YBR219C	P38317	127 aa		4.88	□□□□□ -1.63
TUB1	YML085C	YAL064W	P39711	94 aa		4.88	□□□□□ -1.63
TUB1	YML085C	YGL230C	P53074	147 aa		4.88	□□□□□ -1.63
TUB1	YML085C	SNA2	P56508	79 aa		4.88	□□□□□ -1.63
TUB1	YML085C	YAL065C	O13511	128 aa		4.87	□□□□□ -1.63
TUB1	YML085C	ATP5	P09457	212 aa		4.87	□□□□□ -1.63
TUB1	YML085C	RPL18A	P0CX49	186 aa	Known RBP	4.87	□□□□□ -1.63
TUB1	YML085C	RPL18B	P0CX50	186 aa	Known RBP	4.87	□□□□□ -1.63
TUB1	YML085C	FUN14	P18411	198 aa		4.87	□□□□□ -1.63
TUB1	YML085C	YKR041W	P36134	250 aa		4.87	□□□□□ -1.63
TUB1	YML085C	YPL073C	P40323	161 aa		4.87	□□□□□ -1.63
TUB1	YML085C	SCS22	Q6Q595	175 aa		4.87	□□□□□ -1.63
TUB1	YML085C	IGO2	Q9P305	131 aa		4.87	□□□□□ -1.63
TUB1	YML085C	MRPL44	P19956	98 aa		4.86	□□□□□ -1.63
TUB1	YML085C	ABF2	Q02486	183 aa		4.86	□□□□□ -1.63
TUB1	YML085C	AQY2	P0CD90	149 aa		4.84	□□□□□ -1.63
TUB1	YML085C	OXA1	P39952	402 aa		4.84	□□□□□ -1.63
TUB1	YML085C	YDL157C	Q12082	118 aa		4.84	□□□□□ -1.63
TUB1	YML085C	MBF1	O14467	151 aa	Known RBP	4.83	□□□□□ -1.64
TUB1	YML085C	GIS2	P53849	153 aa	Known RBP RIP-Chip data	4.83	□□□□□ -1.64	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 107 ms