RNA–Protein interactions for RNA: YLR220W

CCC1, Transcript of Vacuolar Fe2+/Mn2+ transporter, yeast

Gene CCC1, Length 969 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CCC1	YLR220W	PKR1	Q03880	122 aa	Known RBP	11.02	□□□□□ -0.65
CCC1	YLR220W	COA3	Q3E7B2	85 aa		11.02	□□□□□ -0.65
CCC1	YLR220W	RPL33A	P05744	107 aa	Known RBP	11.01	□□□□□ -0.65
CCC1	YLR220W	URM1	P40554	99 aa	Predicted RBP	11.01	□□□□□ -0.65
CCC1	YLR220W	RPL33B	P41056	107 aa	Known RBP	11.01	□□□□□ -0.65
CCC1	YLR220W	HMRA2	P0CY13	119 aa		11	□□□□□ -0.65
CCC1	YLR220W	ADH2	P00331	348 aa	Known RBP	10.99	□□□□□ -0.65
CCC1	YLR220W	MRPL11	P36521	249 aa	Predicted RBP	10.99	□□□□□ -0.65
CCC1	YLR220W	CNL1	Q06333	122 aa		10.99	□□□□□ -0.65
CCC1	YLR220W	YBR209W	P38311	105 aa		10.98	□□□□□ -0.65
CCC1	YLR220W	YIL059C	P40520	121 aa		10.98	□□□□□ -0.65
CCC1	YLR220W	AIM29	P36154	155 aa		10.97	□□□□□ -0.65
CCC1	YLR220W	YGL088W	P53151	121 aa		10.97	□□□□□ -0.65
CCC1	YLR220W	YMR103C	Q04436	120 aa		10.96	□□□□□ -0.65
CCC1	YLR220W	YPR010C-A	A5Z2X5	72 aa		10.95	□□□□□ -0.66
CCC1	YLR220W	YEL008W	P40001	126 aa		10.95	□□□□□ -0.66
CCC1	YLR220W	ERG28	P40030	148 aa		10.95	□□□□□ -0.66
CCC1	YLR220W	PBA1	Q05778	276 aa		10.95	□□□□□ -0.66
CCC1	YLR220W	NUP42	P49686	430 aa	Known RBP	10.94	□□□□□ -0.66
CCC1	YLR220W	YLR050C	Q12155	161 aa	Known RBP	10.94	□□□□□ -0.66
CCC1	YLR220W	RTC6	O14464	93 aa		10.93	□□□□□ -0.66
CCC1	YLR220W	APS1	P35181	156 aa		10.93	□□□□□ -0.66
CCC1	YLR220W	FYV4	P38783	130 aa	Predicted RBP	10.93	□□□□□ -0.66
CCC1	YLR220W	YDR115W	Q04598	105 aa		10.92	□□□□□ -0.66
CCC1	YLR220W	TPT1	Q12272	230 aa	Known RBP	10.92	□□□□□ -0.66
CCC1	YLR220W	RPL31A	P0C2H8	113 aa	Known RBP	10.91	□□□□□ -0.66
CCC1	YLR220W	YKL070W	P36087	169 aa		10.91	□□□□□ -0.66
CCC1	YLR220W	YMR320W	Q04897	101 aa		10.91	□□□□□ -0.66
CCC1	YLR220W	YCL021W-A	Q96VH3	125 aa		10.9	□□□□□ -0.66
CCC1	YLR220W	YAR029W	P39549	74 aa		10.88	□□□□□ -0.67
CCC1	YLR220W	DIF1	O13577	133 aa		10.87	□□□□□ -0.67
CCC1	YLR220W	SEC11	P15367	167 aa		10.87	□□□□□ -0.67
CCC1	YLR220W	HAC1	P41546	238 aa		10.87	□□□□□ -0.67
CCC1	YLR220W	YBR219C	P38317	127 aa		10.86	□□□□□ -0.67
CCC1	YLR220W	YER085C	P40058	173 aa		10.86	□□□□□ -0.67
CCC1	YLR220W	YLR194C	Q05777	254 aa		10.86	□□□□□ -0.67
CCC1	YLR220W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	10.86	□□□□□ -0.67	not detected
CCC1	YLR220W	ATP15	P21306	62 aa		10.84	□□□□□ -0.67
CCC1	YLR220W	ENV10	Q99382	181 aa		10.84	□□□□□ -0.67
CCC1	YLR220W	SCS22	Q6Q595	175 aa		10.83	□□□□□ -0.68
CCC1	YLR220W	YGL230C	P53074	147 aa		10.82	□□□□□ -0.68
CCC1	YLR220W	BET5	Q03630	159 aa		10.82	□□□□□ -0.68
CCC1	YLR220W	DFM1	Q12743	341 aa	Known RBP	10.82	□□□□□ -0.68
CCC1	YLR220W	SVP26	P38869	228 aa		10.81	□□□□□ -0.68
CCC1	YLR220W	RPC10	P40422	70 aa		10.81	□□□□□ -0.68
CCC1	YLR220W	YDL022C-A	P0C5L6	82 aa		10.8	□□□□□ -0.68
CCC1	YLR220W	LSM8	P47093	109 aa	Known RBP	10.8	□□□□□ -0.68
CCC1	YLR220W	AIM11	P87275	137 aa		10.8	□□□□□ -0.68
CCC1	YLR220W	YMR295C	Q03559	197 aa		10.8	□□□□□ -0.68
CCC1	YLR220W	RRT15	Q3E811	62 aa		10.8	□□□□□ -0.68
CCC1	YLR220W	RPL11A	P0C0W9	174 aa	Known RBP	10.79	□□□□□ -0.68
CCC1	YLR220W	YPR195C	Q06594	109 aa		10.79	□□□□□ -0.68
CCC1	YLR220W	FYV7	Q12247	151 aa		10.79	□□□□□ -0.68
CCC1	YLR220W	RPL11B	Q3E757	174 aa	Predicted RBP	10.79	□□□□□ -0.68
CCC1	YLR220W	FUN14	P18411	198 aa		10.78	□□□□□ -0.68
CCC1	YLR220W	YKL044W	P36092	106 aa		10.78	□□□□□ -0.68
CCC1	YLR220W	YDL157C	Q12082	118 aa		10.78	□□□□□ -0.68
CCC1	YLR220W	CGR1	P53188	120 aa		10.77	□□□□□ -0.69
CCC1	YLR220W	YPL261C	Q08976	102 aa		10.77	□□□□□ -0.69
CCC1	YLR220W	YMR175W-A	Q3E766	64 aa		10.76	□□□□□ -0.69
CCC1	YLR220W	MRPL44	P19956	98 aa		10.75	□□□□□ -0.69
CCC1	YLR220W	MSL1	P40567	111 aa	Predicted RBP	10.75	□□□□□ -0.69
CCC1	YLR220W	YCR007C	P25354	239 aa		10.73	□□□□□ -0.69
CCC1	YLR220W	YKR041W	P36134	250 aa		10.73	□□□□□ -0.69
CCC1	YLR220W	SHU1	P38751	150 aa		10.73	□□□□□ -0.69
CCC1	YLR220W	YBL081W	P38180	368 aa	Known RBP	10.72	□□□□□ -0.69
CCC1	YLR220W	YAL065C	O13511	128 aa		10.71	□□□□□ -0.69
CCC1	YLR220W	PEX17	P40155	199 aa		10.71	□□□□□ -0.69
CCC1	YLR220W	NAT5	Q08689	176 aa		10.71	□□□□□ -0.69
CCC1	YLR220W	RPL32	P38061	130 aa	Known RBP	10.7	□□□□□ -0.7
CCC1	YLR220W	COX14	P39103	70 aa		10.7	□□□□□ -0.7
CCC1	YLR220W	YAR023C	D6VPM8	179 aa		10.68	□□□□□ -0.7
CCC1	YLR220W	YAL064W	P39711	94 aa		10.68	□□□□□ -0.7
CCC1	YLR220W	YDL241W	Q07738	123 aa		10.68	□□□□□ -0.7
CCC1	YLR220W	SCM4	P32564	187 aa		10.67	□□□□□ -0.7
CCC1	YLR220W	YEL067C	P39978	195 aa		10.67	□□□□□ -0.7
CCC1	YLR220W	YPL229W	Q99395	206 aa		10.67	□□□□□ -0.7
CCC1	YLR220W	YPL073C	P40323	161 aa		10.66	□□□□□ -0.7
CCC1	YLR220W	MRPS12	P53732	153 aa		10.66	□□□□□ -0.7
CCC1	YLR220W	QCR8	P08525	94 aa		10.65	□□□□□ -0.7
CCC1	YLR220W	ATP5	P09457	212 aa		10.65	□□□□□ -0.7
CCC1	YLR220W	RPL18A	P0CX49	186 aa	Known RBP	10.65	□□□□□ -0.7
CCC1	YLR220W	RPL18B	P0CX50	186 aa	Known RBP	10.65	□□□□□ -0.7
CCC1	YLR220W	ANB1	P19211	157 aa		10.65	□□□□□ -0.7
CCC1	YLR220W	TOA2	P32774	122 aa		10.64	□□□□□ -0.71
CCC1	YLR220W	PPT2	Q12036	173 aa		10.64	□□□□□ -0.71
CCC1	YLR220W	CIN5	P40917	295 aa		10.63	□□□□□ -0.71
CCC1	YLR220W	YNR077C	P53758	84 aa		10.63	□□□□□ -0.71
CCC1	YLR220W	GAT4	P40569	121 aa		10.61	□□□□□ -0.71
CCC1	YLR220W	YDL085C-A	Q3E7B7	68 aa	Known RBP	10.61	□□□□□ -0.71
CCC1	YLR220W	IGO2	Q9P305	131 aa		10.61	□□□□□ -0.71
CCC1	YLR220W	MRP10	O75012	95 aa		10.59	□□□□□ -0.71
CCC1	YLR220W	ADH1	P00330	348 aa	Known RBP	10.58	□□□□□ -0.72
CCC1	YLR220W	VTC1	P40046	129 aa	RIP-Chip data	10.58	□□□□□ -0.72	not detected
CCC1	YLR220W	YDR034C-A	P0C289	58 aa		10.55	□□□□□ -0.72
CCC1	YLR220W	RPF1	P38805	295 aa	Known RBP	10.55	□□□□□ -0.72
CCC1	YLR220W	PAU23	Q07987	124 aa		10.55	□□□□□ -0.72
CCC1	YLR220W	PAU17	Q12370	124 aa		10.55	□□□□□ -0.72
CCC1	YLR220W	RPL28	P02406	149 aa	Known RBP	10.54	□□□□□ -0.72
CCC1	YLR220W	HAP3	P13434	144 aa		10.53	□□□□□ -0.72

Retrieved 100 of 5,963 RNA–protein pairs in 26.3 ms