RNA–Protein interactions for RNA: YLR132C

USB1, Transcript of Putative phosphodiesterase specific for U6 snRNA 3' end modification, yeastyeast

Gene USB1, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USB1YLR132C NAT3Q06504 195 aa1.91□□□□□ -2.1
USB1YLR132C RTC6O14464 93 aa1.9□□□□□ -2.11
USB1YLR132C YDR034C-AP0C289 58 aa1.9□□□□□ -2.11
USB1YLR132C GSP2P32836 220 aaKnown RBP1.9□□□□□ -2.11
USB1YLR132C SFT2P38166 215 aa1.9□□□□□ -2.11
USB1YLR132C SBH1P52870 82 aa1.9□□□□□ -2.11
USB1YLR132C CWC27Q02770 301 aa1.9□□□□□ -2.11
USB1YLR132C SUS1Q6WNK7 96 aa1.9□□□□□ -2.11
USB1YLR132C EMP24P32803 203 aaKnown RBP1.89□□□□□ -2.11
USB1YLR132C LSM2P38203 95 aaKnown RBP1.89□□□□□ -2.11
USB1YLR132C SRP14P38985 146 aa1.89□□□□□ -2.11
USB1YLR132C VPS28Q02767 242 aa1.89□□□□□ -2.11
USB1YLR132C YPR145C-AQ2V2P0 78 aa1.89□□□□□ -2.11
USB1YLR132C VAR1P02381 398 aa1.88□□□□□ -2.11
USB1YLR132C RPS25BP0C0T4 108 aaKnown RBP1.88□□□□□ -2.11
USB1YLR132C SHB17P36136 271 aaKnown RBP1.88□□□□□ -2.11
USB1YLR132C YHL018WP38744 120 aaPredicted RBP1.88□□□□□ -2.11
USB1YLR132C HPA3P39979 161 aa1.88□□□□□ -2.11
USB1YLR132C YGR017WP53210 297 aa1.88□□□□□ -2.11
USB1YLR132C TMA23Q03525 211 aa1.88□□□□□ -2.11
USB1YLR132C RPS25AQ3E792 108 aaPredicted RBP1.88□□□□□ -2.11
USB1YLR132C RRT15Q3E811 62 aa1.88□□□□□ -2.11
USB1YLR132C COX8P04039 78 aa1.87□□□□□ -2.11
USB1YLR132C RPL33AP05744 107 aaKnown RBP1.87□□□□□ -2.11
USB1YLR132C YKR041WP36134 250 aa1.87□□□□□ -2.11
USB1YLR132C SPI1P40092 148 aa1.87□□□□□ -2.11
USB1YLR132C MIC27P50945 234 aa1.87□□□□□ -2.11
USB1YLR132C LCL1Q02786 101 aa1.87□□□□□ -2.11
USB1YLR132C COA2Q3E823 68 aa1.87□□□□□ -2.11
USB1YLR132C YLR307C-AQ3E825 87 aa1.87□□□□□ -2.11
USB1YLR132C YHL042WP38729 150 aa1.86□□□□□ -2.11
USB1YLR132C SWM2P40342 146 aa1.86□□□□□ -2.11
USB1YLR132C RBL2P48606 106 aaKnown RBP1.86□□□□□ -2.11
USB1YLR132C UPS3Q04006 179 aa1.86□□□□□ -2.11
USB1YLR132C YMR090WQ04304 227 aaKnown RBP1.86□□□□□ -2.11
USB1YLR132C YLR042CQ07990 161 aa1.86□□□□□ -2.11
USB1YLR132C YDR010CQ12426 110 aa1.86□□□□□ -2.11
USB1YLR132C YGR269WP40326 108 aa1.85□□□□□ -2.11
USB1YLR132C EMC5P40540 141 aa1.85□□□□□ -2.11
USB1YLR132C THG1P53215 237 aaKnown RBP1.85□□□□□ -2.11
USB1YLR132C YDR366CP87287 132 aa1.85□□□□□ -2.11
USB1YLR132C YLR050CQ12155 161 aaKnown RBP1.85□□□□□ -2.11
USB1YLR132C YOR015WQ12169 119 aa1.85□□□□□ -2.11
USB1YLR132C YCR023CP25351 611 aa1.84□□□□□ -2.11
USB1YLR132C YBR013CP38215 129 aa1.84□□□□□ -2.11
USB1YLR132C TRS20P38334 175 aa1.84□□□□□ -2.11
USB1YLR132C SLM6P38343 150 aa1.84□□□□□ -2.11
USB1YLR132C BRP1P53194 125 aa1.84□□□□□ -2.11
USB1YLR132C FIT2Q08906 153 aa1.84□□□□□ -2.11
USB1YLR132C DDR48P18899 430 aaKnown RBP1.83□□□□□ -2.12
USB1YLR132C GIM5Q04493 163 aa1.83□□□□□ -2.12
USB1YLR132C ATP20Q12233 115 aa1.83□□□□□ -2.12
USB1YLR132C RDI1Q12434 202 aa1.83□□□□□ -2.12
USB1YLR132C YHR213W-AQ8TGT4 77 aa1.83□□□□□ -2.12
USB1YLR132C YPR010C-AA5Z2X5 72 aa1.82□□□□□ -2.12
USB1YLR132C DER1P38307 211 aa1.82□□□□□ -2.12
USB1YLR132C ERI1P62651 68 aaKnown RBP1.82□□□□□ -2.12
USB1YLR132C TMA20P89886 181 aaPredicted RBP1.82□□□□□ -2.12
USB1YLR132C YMR082CQ04276 118 aa1.82□□□□□ -2.12
USB1YLR132C YMR320WQ04897 101 aa1.82□□□□□ -2.12
USB1YLR132C FYV12Q08559 129 aa1.82□□□□□ -2.12
USB1YLR132C HSP12P22943 109 aaKnown RBP1.81□□□□□ -2.12
USB1YLR132C YEA6P39953 335 aa1.81□□□□□ -2.12
USB1YLR132C YMR007WQ03675 126 aa1.81□□□□□ -2.12
USB1YLR132C YDR029WQ12111 104 aa1.81□□□□□ -2.12
USB1YLR132C YBR200W-AQ3E755 54 aa1.81□□□□□ -2.12
USB1YLR132C CMC2Q3E7A4 109 aa1.81□□□□□ -2.12
USB1YLR132C YFL065CP43539 102 aa1.8□□□□□ -2.12
USB1YLR132C RRT7Q07829 113 aa1.8□□□□□ -2.12
USB1YLR132C YMR122W-AQ3E842 84 aa1.8□□□□□ -2.12
USB1YLR132C RAD6P06104 172 aa1.79□□□□□ -2.12
USB1YLR132C QCR9P22289 66 aa1.79□□□□□ -2.12
USB1YLR132C HYP2P23301 157 aaKnown RBP1.79□□□□□ -2.12
USB1YLR132C SPT14P32363 452 aa1.79□□□□□ -2.12
USB1YLR132C RPL14AP36105 138 aaKnown RBP1.79□□□□□ -2.12
USB1YLR132C RPL14BP38754 138 aaKnown RBP1.79□□□□□ -2.12
USB1YLR132C IPI1P38803 334 aaPredicted RBP1.79□□□□□ -2.12
USB1YLR132C YMR141CP40211 102 aa1.79□□□□□ -2.12
USB1YLR132C HUA1P40325 198 aa1.79□□□□□ -2.12
USB1YLR132C AVO2Q04749 426 aa1.79□□□□□ -2.12
USB1YLR132C YLR146W-AQ2V2P1 62 aa1.79□□□□□ -2.12
USB1YLR132C SPS2P08459 502 aa1.78□□□□□ -2.12
USB1YLR132C UBC5P15732 148 aa1.78□□□□□ -2.12
USB1YLR132C RAV2Q03956 351 aa1.78□□□□□ -2.12
USB1YLR132C YLR194CQ05777 254 aa1.78□□□□□ -2.12
USB1YLR132C YLR342W-AQ3E810 57 aa1.78□□□□□ -2.12
USB1YLR132C SEC59P20048 519 aa1.77□□□□□ -2.13
USB1YLR132C AHT1P29589 182 aa1.77□□□□□ -2.13
USB1YLR132C AME1P38313 324 aa1.77□□□□□ -2.13
USB1YLR132C YHR173CP38864 112 aa1.77□□□□□ -2.13
USB1YLR132C YEL067CP39978 195 aa1.77□□□□□ -2.13
USB1YLR132C AIM19P40502 157 aa1.77□□□□□ -2.13
USB1YLR132C PMP3P87284 55 aa1.77□□□□□ -2.13
USB1YLR132C SNA2P56508 79 aa1.76□□□□□ -2.13
USB1YLR132C DAD1Q12248 94 aa1.76□□□□□ -2.13
USB1YLR132C PCC1Q3E833 88 aa1.76□□□□□ -2.13
USB1YLR132C ACP1P32463 125 aa1.75□□□□□ -2.13
USB1YLR132C FYV4P38783 130 aaPredicted RBP1.75□□□□□ -2.13
USB1YLR132C NSE4P43124 402 aa1.75□□□□□ -2.13
USB1YLR132C MRP49P32388 137 aa1.74□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 141.7 ms