RNA–Protein interactions for RNA: YKR059W

TIF1, Transcript of Translation initiation factor eIF4A, yeast

Gene TIF1, Length 1,188 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIF1	YKR059W	RPL26B	P53221	127 aa	Known RBP	4.29	□□□□□ -1.72
TIF1	YKR059W	YMR090W	Q04304	227 aa	Known RBP	4.29	□□□□□ -1.72
TIF1	YKR059W	FSF1	Q12029	327 aa	Known RBP	4.29	□□□□□ -1.72
TIF1	YKR059W	POC4	Q12245	148 aa	Predicted RBP	4.29	□□□□□ -1.72
TIF1	YKR059W	YCR075W-A	Q3E830	75 aa		4.29	□□□□□ -1.72
TIF1	YKR059W	SFT2	P38166	215 aa		4.28	□□□□□ -1.72
TIF1	YKR059W	YGR039W	P53225	103 aa		4.28	□□□□□ -1.72
TIF1	YKR059W	DDI2	P0CH63	225 aa		4.27	□□□□□ -1.73
TIF1	YKR059W	DDI3	P0CH64	225 aa		4.27	□□□□□ -1.73
TIF1	YKR059W	YCR001W	P25347	104 aa		4.27	□□□□□ -1.73
TIF1	YKR059W	SPC25	P40014	221 aa		4.27	□□□□□ -1.73
TIF1	YKR059W	SWM2	P40342	146 aa		4.27	□□□□□ -1.73
TIF1	YKR059W	MIC27	P50945	234 aa		4.27	□□□□□ -1.73
TIF1	YKR059W	YMR320W	Q04897	101 aa		4.27	□□□□□ -1.73
TIF1	YKR059W	YPR145C-A	Q2V2P0	78 aa		4.27	□□□□□ -1.73
TIF1	YKR059W	COA2	Q3E823	68 aa		4.27	□□□□□ -1.73
TIF1	YKR059W	TIR1	P10863	254 aa		4.26	□□□□□ -1.73
TIF1	YKR059W	KRE1	P17260	313 aa		4.26	□□□□□ -1.73
TIF1	YKR059W	ERV14	P53173	138 aa		4.26	□□□□□ -1.73
TIF1	YKR059W	YMR253C	Q04835	414 aa		4.26	□□□□□ -1.73
TIF1	YKR059W	YPR195C	Q06594	109 aa		4.26	□□□□□ -1.73
TIF1	YKR059W	SLO1	Q3E784	85 aa		4.26	□□□□□ -1.73
TIF1	YKR059W	SPS2	P08459	502 aa		4.25	□□□□□ -1.73
TIF1	YKR059W	RPS25B	P0C0T4	108 aa	Known RBP	4.25	□□□□□ -1.73
TIF1	YKR059W	MRPL44	P19956	98 aa		4.25	□□□□□ -1.73
TIF1	YKR059W	GSP1	P32835	219 aa	Known RBP	4.25	□□□□□ -1.73
TIF1	YKR059W	GSP2	P32836	220 aa	Known RBP	4.25	□□□□□ -1.73
TIF1	YKR059W	YGR017W	P53210	297 aa		4.25	□□□□□ -1.73
TIF1	YKR059W	YGR025W	P53216	100 aa		4.25	□□□□□ -1.73
TIF1	YKR059W	YCL001W-A	P87012	153 aa		4.25	□□□□□ -1.73
TIF1	YKR059W	RPS25A	Q3E792	108 aa	Predicted RBP	4.25	□□□□□ -1.73
TIF1	YKR059W	EMP24	P32803	203 aa	Known RBP	4.24	□□□□□ -1.73
TIF1	YKR059W	YHR022C	P38763	256 aa		4.24	□□□□□ -1.73
TIF1	YKR059W	YER181C	P40097	107 aa		4.24	□□□□□ -1.73
TIF1	YKR059W	YGR240C-A	Q3E786	66 aa		4.24	□□□□□ -1.73
TIF1	YKR059W	SRP21	P32342	167 aa		4.23	□□□□□ -1.73
TIF1	YKR059W	FYV4	P38783	130 aa	Predicted RBP	4.23	□□□□□ -1.73
TIF1	YKR059W	SPI1	P40092	148 aa		4.23	□□□□□ -1.73
TIF1	YKR059W	YGR269W	P40326	108 aa		4.23	□□□□□ -1.73
TIF1	YKR059W	SPC1	P46965	94 aa		4.23	□□□□□ -1.73
TIF1	YKR059W	YMR082C	Q04276	118 aa		4.23	□□□□□ -1.73
TIF1	YKR059W	FYV12	Q08559	129 aa		4.23	□□□□□ -1.73
TIF1	YKR059W	VAR1	P02381	398 aa		4.22	□□□□□ -1.73
TIF1	YKR059W	FZF1	P32805	299 aa		4.22	□□□□□ -1.73
TIF1	YKR059W	SHB17	P36136	271 aa	Known RBP	4.22	□□□□□ -1.73
TIF1	YKR059W	ATP20	Q12233	115 aa		4.22	□□□□□ -1.73
TIF1	YKR059W	PAM17	P36147	197 aa		4.21	□□□□□ -1.74
TIF1	YKR059W	YBR209W	P38311	105 aa		4.21	□□□□□ -1.74
TIF1	YKR059W	YEA6	P39953	335 aa		4.21	□□□□□ -1.74
TIF1	YKR059W	YNL217W	P40152	326 aa		4.21	□□□□□ -1.74
TIF1	YKR059W	MPC3	P53311	146 aa		4.21	□□□□□ -1.74
TIF1	YKR059W	SAE3	P89114	91 aa		4.21	□□□□□ -1.74
TIF1	YKR059W	PRE1	P22141	198 aa	Known RBP	4.2	□□□□□ -1.74
TIF1	YKR059W	LSM2	P38203	95 aa	Known RBP	4.2	□□□□□ -1.74
TIF1	YKR059W	YNR077C	P53758	84 aa		4.2	□□□□□ -1.74
TIF1	YKR059W	TMA23	Q03525	211 aa		4.2	□□□□□ -1.74
TIF1	YKR059W	CNL1	Q06333	122 aa		4.2	□□□□□ -1.74
TIF1	YKR059W	ANB1	P19211	157 aa		4.19	□□□□□ -1.74
TIF1	YKR059W	QCR9	P22289	66 aa		4.19	□□□□□ -1.74
TIF1	YKR059W	SRB6	P32570	121 aa		4.19	□□□□□ -1.74
TIF1	YKR059W	CUE4	Q04201	117 aa	Predicted RBP	4.19	□□□□□ -1.74
TIF1	YKR059W	SNN1	P48232	102 aa		4.18	□□□□□ -1.74
TIF1	YKR059W	LCL2	Q08045	131 aa		4.18	□□□□□ -1.74
TIF1	YKR059W	YLR146W-A	Q2V2P1	62 aa		4.18	□□□□□ -1.74
TIF1	YKR059W	SSS1	P35179	80 aa		4.17	□□□□□ -1.74
TIF1	YKR059W	LIP1	Q03579	150 aa		4.17	□□□□□ -1.74
TIF1	YKR059W	RRT7	Q07829	113 aa		4.17	□□□□□ -1.74
TIF1	YKR059W	WIP1	Q2V2P8	89 aa		4.17	□□□□□ -1.74
TIF1	YKR059W	YLL066W-B	Q8TGJ7	56 aa		4.17	□□□□□ -1.74
TIF1	YKR059W	SEC59	P20048	519 aa		4.16	□□□□□ -1.74
TIF1	YKR059W	MRPL24	P36525	258 aa	Predicted RBP	4.16	□□□□□ -1.74
TIF1	YKR059W	TVP18	Q04767	167 aa		4.16	□□□□□ -1.74
TIF1	YKR059W	YLR042C	Q07990	161 aa		4.16	□□□□□ -1.74
TIF1	YKR059W	YLR236C	A0A023PZG4	107 aa		4.15	□□□□□ -1.75
TIF1	YKR059W	HSP12	P22943	109 aa	Known RBP	4.15	□□□□□ -1.75
TIF1	YKR059W	GLC8	P41818	229 aa		4.15	□□□□□ -1.75
TIF1	YKR059W	YJR146W	P47174	117 aa		4.15	□□□□□ -1.75
TIF1	YKR059W	BRP1	P53194	125 aa		4.15	□□□□□ -1.75
TIF1	YKR059W	FIT2	Q08906	153 aa		4.15	□□□□□ -1.75
TIF1	YKR059W	EMC6	Q12431	108 aa		4.15	□□□□□ -1.75
TIF1	YKR059W	PCC1	Q3E833	88 aa		4.15	□□□□□ -1.75
TIF1	YKR059W	RTC6	O14464	93 aa		4.14	□□□□□ -1.75
TIF1	YKR059W	TOM7	P53507	60 aa		4.14	□□□□□ -1.75
TIF1	YKR059W	YNL277W-A	Q3E7Z0	62 aa		4.14	□□□□□ -1.75
TIF1	YKR059W	COA6	Q3E846	104 aa		4.14	□□□□□ -1.75
TIF1	YKR059W	YOR304C-A	O14468	76 aa		4.13	□□□□□ -1.75
TIF1	YKR059W	FUN14	P18411	198 aa		4.13	□□□□□ -1.75
TIF1	YKR059W	AHT1	P29589	182 aa		4.13	□□□□□ -1.75
TIF1	YKR059W	SVP26	P38869	228 aa		4.13	□□□□□ -1.75
TIF1	YKR059W	NSE4	P43124	402 aa		4.13	□□□□□ -1.75
TIF1	YKR059W	DAD3	P69850	94 aa		4.13	□□□□□ -1.75
TIF1	YKR059W	YMR007W	Q03675	126 aa		4.13	□□□□□ -1.75
TIF1	YKR059W	YBR013C	P38215	129 aa		4.12	□□□□□ -1.75
TIF1	YKR059W	AVO2	Q04749	426 aa		4.12	□□□□□ -1.75
TIF1	YKR059W	YOR015W	Q12169	119 aa		4.12	□□□□□ -1.75
TIF1	YKR059W	YJL144W	P47009	104 aa		4.11	□□□□□ -1.75
TIF1	YKR059W	YLR342W-A	Q3E810	57 aa		4.11	□□□□□ -1.75
TIF1	YKR059W	FMP49	A0A023PZB3	126 aa		4.1	□□□□□ -1.75
TIF1	YKR059W	MRP49	P32388	137 aa		4.1	□□□□□ -1.75
TIF1	YKR059W	ERI1	P62651	68 aa	Known RBP	4.1	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 50.5 ms