RNA–Protein interactions for RNA: YKR040C

YKR040C, Transcript of Dubious open reading frame, yeastyeast

Gene YKR040C, Length 504 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YKR040CYKR040C BET5Q03630 159 aa8.04□□□□□ -1.12
YKR040CYKR040C YAR023CD6VPM8 179 aa8.03□□□□□ -1.12
YKR040CYKR040C PCL2P25693 308 aa8.03□□□□□ -1.12
YKR040CYKR040C PKR1Q03880 122 aaKnown RBP8.03□□□□□ -1.12
YKR040CYKR040C YER085CP40058 173 aa8.02□□□□□ -1.13
YKR040CYKR040C MED7Q08278 222 aa8.02□□□□□ -1.13
YKR040CYKR040C YCL021W-AQ96VH3 125 aa8.02□□□□□ -1.13
YKR040CYKR040C MRP10O75012 95 aa8□□□□□ -1.13
YKR040CYKR040C URM1P40554 99 aaPredicted RBP8□□□□□ -1.13
YKR040CYKR040C ERV14P53173 138 aa8□□□□□ -1.13
YKR040CYKR040C YPL229WQ99395 206 aa8□□□□□ -1.13
YKR040CYKR040C YDR034C-AP0C289 58 aa7.99□□□□□ -1.13
YKR040CYKR040C YEL008WP40001 126 aa7.99□□□□□ -1.13
YKR040CYKR040C GSP1P32835 219 aaKnown RBP7.98□□□□□ -1.13
YKR040CYKR040C GSP2P32836 220 aaKnown RBP7.98□□□□□ -1.13
YKR040CYKR040C OST3P48439 350 aa7.98□□□□□ -1.13
YKR040CYKR040C ARL3Q02804 198 aa7.98□□□□□ -1.13
YKR040CYKR040C ENV10Q99382 181 aa7.98□□□□□ -1.13
YKR040CYKR040C HTL1Q9URQ5 78 aa7.98□□□□□ -1.13
YKR040CYKR040C HMRA2P0CY13 119 aa7.97□□□□□ -1.13
YKR040CYKR040C RPC10P40422 70 aa7.96□□□□□ -1.14
YKR040CYKR040C YAL064WP39711 94 aa7.95□□□□□ -1.14
YKR040CYKR040C YER134CP40081 178 aa7.95□□□□□ -1.14
YKR040CYKR040C NUP42P49686 430 aaKnown RBP7.95□□□□□ -1.14
YKR040CYKR040C YBR219CP38317 127 aa7.94□□□□□ -1.14
YKR040CYKR040C YDR042CQ03205 200 aa7.94□□□□□ -1.14
YKR040CYKR040C TPT1Q12272 230 aaKnown RBP7.94□□□□□ -1.14
YKR040CYKR040C RPL31AP0C2H8 113 aaKnown RBP7.93□□□□□ -1.14
YKR040CYKR040C YAR029WP39549 74 aa7.93□□□□□ -1.14
YKR040CYKR040C YML108WQ03759 105 aa7.93□□□□□ -1.14
YKR040CYKR040C YBL081WP38180 368 aaKnown RBP7.92□□□□□ -1.14
YKR040CYKR040C SAP30P38429 201 aa7.92□□□□□ -1.14
YKR040CYKR040C COA3Q3E7B2 85 aa7.92□□□□□ -1.14
YKR040CYKR040C POP3P53833 195 aaPredicted RBP7.91□□□□□ -1.14
YKR040CYKR040C TIM11P81449 96 aaPredicted RBP7.91□□□□□ -1.14
YKR040CYKR040C RPL27BP0C2H7 136 aaKnown RBP7.9□□□□□ -1.14
YKR040CYKR040C CIN5P40917 295 aa7.9□□□□□ -1.14
YKR040CYKR040C YMR295CQ03559 197 aa7.9□□□□□ -1.14
YKR040CYKR040C YLR112WQ12130 139 aa7.9□□□□□ -1.14
YKR040CYKR040C YMR175W-AQ3E766 64 aa7.9□□□□□ -1.14
YKR040CYKR040C APS1P35181 156 aa7.89□□□□□ -1.15
YKR040CYKR040C SNA2P56508 79 aa7.89□□□□□ -1.15
YKR040CYKR040C YDR029WQ12111 104 aa7.89□□□□□ -1.15
YKR040CYKR040C ATP15P21306 62 aa7.87□□□□□ -1.15
YKR040CYKR040C YLR194CQ05777 254 aa7.87□□□□□ -1.15
YKR040CYKR040C CMC2Q3E7A4 109 aa7.86□□□□□ -1.15
YKR040CYKR040C YMR103CQ04436 120 aa7.85□□□□□ -1.15
YKR040CYKR040C MRPL33P20084 86 aa7.84□□□□□ -1.15
YKR040CYKR040C VTC1P40046 129 aaRIP-Chip data7.83□□□□□ -1.16not detected
YKR040CYKR040C DFM1Q12743 341 aaKnown RBP7.83□□□□□ -1.16
YKR040CYKR040C YAL065CO13511 128 aa7.82□□□□□ -1.16
YKR040CYKR040C YKL070WP36087 169 aa7.82□□□□□ -1.16
YKR040CYKR040C FYV4P38783 130 aaPredicted RBP7.82□□□□□ -1.16
YKR040CYKR040C CUE4Q04201 117 aaPredicted RBP7.82□□□□□ -1.16
YKR040CYKR040C SSS1P35179 80 aa7.8□□□□□ -1.16
YKR040CYKR040C YDL241WQ07738 123 aa7.8□□□□□ -1.16
YKR040CYKR040C SMP1P38128 452 aa7.79□□□□□ -1.16
YKR040CYKR040C SHU1P38751 150 aa7.79□□□□□ -1.16
YKR040CYKR040C AIM11P87275 137 aa7.78□□□□□ -1.16
YKR040CYKR040C YLR307C-AQ3E825 87 aa7.78□□□□□ -1.16
YKR040CYKR040C COX14P39103 70 aa7.77□□□□□ -1.17
YKR040CYKR040C LCL1Q02786 101 aa7.77□□□□□ -1.17
YKR040CYKR040C YPL261CQ08976 102 aa7.76□□□□□ -1.17
YKR040CYKR040C PAU16P35994 123 aa7.75□□□□□ -1.17
YKR040CYKR040C PEX22P39718 180 aa7.75□□□□□ -1.17
YKR040CYKR040C MRPL11P36521 249 aaPredicted RBP7.74□□□□□ -1.17
YKR040CYKR040C CNL1Q06333 122 aa7.74□□□□□ -1.17
YKR040CYKR040C PPT2Q12036 173 aa7.74□□□□□ -1.17
YKR040CYKR040C YLR050CQ12155 161 aaKnown RBP7.74□□□□□ -1.17
YKR040CYKR040C TOA2P32774 122 aa7.73□□□□□ -1.17
YKR040CYKR040C SEN15Q04675 128 aa7.73□□□□□ -1.17
YKR040CYKR040C YIL134C-AQ45U18 67 aa7.73□□□□□ -1.17
YKR040CYKR040C AQY2P0CD90 149 aa7.72□□□□□ -1.17
YKR040CYKR040C PEX17P40155 199 aa7.72□□□□□ -1.17
YKR040CYKR040C SMD1Q02260 146 aaPredicted RBP7.72□□□□□ -1.17
YKR040CYKR040C SCS22Q6Q595 175 aa7.72□□□□□ -1.17
YKR040CYKR040C YDL022C-AP0C5L6 82 aa7.71□□□□□ -1.18
YKR040CYKR040C RPL18AP0CX49 186 aaKnown RBP7.71□□□□□ -1.18
YKR040CYKR040C RPL18BP0CX50 186 aaKnown RBP7.71□□□□□ -1.18
YKR040CYKR040C ATP16Q12165 160 aa7.71□□□□□ -1.18
YKR040CYKR040C YGL041C-BQ3E750 60 aa7.71□□□□□ -1.18
YKR040CYKR040C ADH1P00330 348 aaKnown RBP7.7□□□□□ -1.18
YKR040CYKR040C RPL32P38061 130 aaKnown RBP7.7□□□□□ -1.18
YKR040CYKR040C RPF1P38805 295 aaKnown RBP7.7□□□□□ -1.18
YKR040CYKR040C OXA1P39952 402 aa7.7□□□□□ -1.18
YKR040CYKR040C ECM12O13529 151 aa7.69□□□□□ -1.18
YKR040CYKR040C YKR041WP36134 250 aa7.69□□□□□ -1.18
YKR040CYKR040C CWP2P43497 92 aa7.69□□□□□ -1.18
YKR040CYKR040C ABF2Q02486 183 aa7.69□□□□□ -1.18
YKR040CYKR040C COA6Q3E846 104 aa7.69□□□□□ -1.18
YKR040CYKR040C QCR8P08525 94 aa7.68□□□□□ -1.18
YKR040CYKR040C HAC1P41546 238 aa7.68□□□□□ -1.18
YKR040CYKR040C MMS2P53152 137 aa7.66□□□□□ -1.18
YKR040CYKR040C STF1P01098 86 aa7.65□□□□□ -1.18
YKR040CYKR040C SEC11P15367 167 aa7.65□□□□□ -1.18
YKR040CYKR040C MVB12P42939 101 aa7.65□□□□□ -1.18
YKR040CYKR040C YFL067WP43537 175 aa7.65□□□□□ -1.18
YKR040CYKR040C MRPS12P53732 153 aa7.65□□□□□ -1.18
YKR040CYKR040C CDC43P18898 376 aa7.64□□□□□ -1.19
YKR040CYKR040C Q0032Q9ZZX7 96 aa7.64□□□□□ -1.19
Retrieved 100 of 5,963 RNA–protein pairs in 93.9 ms