RNA–Protein interactions for RNA: YIR017C

MET28, Transcript of bZIP transcriptional activator in the Cbf1p-Met4p-Met28p complex, yeastyeast

Gene MET28, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MET28YIR017C AIM29P36154 155 aa6.99□□□□□ -1.29
MET28YIR017C SEN15Q04675 128 aa6.99□□□□□ -1.29
MET28YIR017C YIL134C-AQ45U18 67 aa6.99□□□□□ -1.29
MET28YIR017C RPL27BP0C2H7 136 aaKnown RBP6.98□□□□□ -1.29
MET28YIR017C HMRA2P0CY13 119 aa6.98□□□□□ -1.29
MET28YIR017C YJR146WP47174 117 aa6.98□□□□□ -1.29
MET28YIR017C YPR010C-AA5Z2X5 72 aa6.97□□□□□ -1.29
MET28YIR017C PAU16P35994 123 aa6.97□□□□□ -1.29
MET28YIR017C YJL028WP47062 111 aa6.97□□□□□ -1.29
MET28YIR017C YGL088WP53151 121 aa6.97□□□□□ -1.29
MET28YIR017C CNL1Q06333 122 aa6.97□□□□□ -1.29
MET28YIR017C APS1P35181 156 aa6.96□□□□□ -1.3
MET28YIR017C YCL021W-AQ96VH3 125 aa6.96□□□□□ -1.3
MET28YIR017C RPL33AP05744 107 aaKnown RBP6.94□□□□□ -1.3
MET28YIR017C RPL33BP41056 107 aaKnown RBP6.94□□□□□ -1.3
MET28YIR017C PBA1Q05778 276 aa6.94□□□□□ -1.3
MET28YIR017C YLR112WQ12130 139 aa6.94□□□□□ -1.3
MET28YIR017C RTC6O14464 93 aa6.93□□□□□ -1.3
MET28YIR017C RPL31AP0C2H8 113 aaKnown RBP6.93□□□□□ -1.3
MET28YIR017C FYV4P38783 130 aaPredicted RBP6.93□□□□□ -1.3
MET28YIR017C ERG28P40030 148 aa6.93□□□□□ -1.3
MET28YIR017C YMR103CQ04436 120 aa6.93□□□□□ -1.3
MET28YIR017C YLR050CQ12155 161 aaKnown RBP6.93□□□□□ -1.3
MET28YIR017C COA3Q3E7B2 85 aa6.93□□□□□ -1.3
MET28YIR017C SVP26P38869 228 aa6.92□□□□□ -1.3
MET28YIR017C MDN1Q12019 4910 aaKnown RBP6.92□□□□□ -1.3
MET28YIR017C RPL11AP0C0W9 174 aaKnown RBP6.91□□□□□ -1.3
MET28YIR017C YAR029WP39549 74 aa6.91□□□□□ -1.3
MET28YIR017C YEL008WP40001 126 aa6.91□□□□□ -1.3
MET28YIR017C YER085CP40058 173 aa6.91□□□□□ -1.3
MET28YIR017C RPL11BQ3E757 174 aaPredicted RBP6.91□□□□□ -1.3
MET28YIR017C YMR320WQ04897 101 aa6.9□□□□□ -1.3
MET28YIR017C TPT1Q12272 230 aaKnown RBP6.9□□□□□ -1.3
MET28YIR017C YLL066W-BQ8TGJ7 56 aa6.9□□□□□ -1.3
MET28YIR017C CGR1P53188 120 aa6.89□□□□□ -1.31
MET28YIR017C ENV10Q99382 181 aa6.89□□□□□ -1.31
MET28YIR017C DIF1O13577 133 aa6.88□□□□□ -1.31
MET28YIR017C YKL070WP36087 169 aa6.88□□□□□ -1.31
MET28YIR017C HAC1P41546 238 aa6.88□□□□□ -1.31
MET28YIR017C ATP15P21306 62 aa6.87□□□□□ -1.31
MET28YIR017C MET32Q12041 191 aa6.87□□□□□ -1.31
MET28YIR017C SCS22Q6Q595 175 aa6.87□□□□□ -1.31
MET28YIR017C FUN14P18411 198 aa6.85□□□□□ -1.31
MET28YIR017C LSM8P47093 109 aaKnown RBP6.85□□□□□ -1.31
MET28YIR017C YDR115WQ04598 105 aa6.85□□□□□ -1.31
MET28YIR017C YPL261CQ08976 102 aa6.85□□□□□ -1.31
MET28YIR017C DFM1Q12743 341 aaKnown RBP6.85□□□□□ -1.31
MET28YIR017C SEC11P15367 167 aa6.84□□□□□ -1.31
MET28YIR017C MSL1P40567 111 aaPredicted RBP6.84□□□□□ -1.31
MET28YIR017C YGL230CP53074 147 aa6.84□□□□□ -1.31
MET28YIR017C YKL044WP36092 106 aa6.83□□□□□ -1.32
MET28YIR017C AIM11P87275 137 aa6.83□□□□□ -1.32
MET28YIR017C YMR295CQ03559 197 aa6.83□□□□□ -1.32
MET28YIR017C BET5Q03630 159 aa6.83□□□□□ -1.32
MET28YIR017C YLR194CQ05777 254 aa6.83□□□□□ -1.32
MET28YIR017C VTS1Q08831 523 aaKnown RBP RIP-Chip data6.83□□□□□ -1.32not detected
MET28YIR017C FYV7Q12247 151 aa6.83□□□□□ -1.32
MET28YIR017C RRT15Q3E811 62 aa6.83□□□□□ -1.32
MET28YIR017C RPL32P38061 130 aaKnown RBP6.82□□□□□ -1.32
MET28YIR017C RPC10P40422 70 aa6.82□□□□□ -1.32
MET28YIR017C YAR023CD6VPM8 179 aa6.81□□□□□ -1.32
MET28YIR017C MRPL44P19956 98 aa6.81□□□□□ -1.32
MET28YIR017C YBR219CP38317 127 aa6.81□□□□□ -1.32
MET28YIR017C YPR195CQ06594 109 aa6.81□□□□□ -1.32
MET28YIR017C YMR175W-AQ3E766 64 aa6.81□□□□□ -1.32
MET28YIR017C YCR007CP25354 239 aa6.8□□□□□ -1.32
MET28YIR017C SHU1P38751 150 aa6.8□□□□□ -1.32
MET28YIR017C ANB1P19211 157 aa6.79□□□□□ -1.32
MET28YIR017C PEX17P40155 199 aa6.79□□□□□ -1.32
MET28YIR017C NAT5Q08689 176 aa6.79□□□□□ -1.32
MET28YIR017C PPT2Q12036 173 aa6.79□□□□□ -1.32
MET28YIR017C YDL157CQ12082 118 aa6.79□□□□□ -1.32
MET28YIR017C YKR041WP36134 250 aa6.78□□□□□ -1.32
MET28YIR017C YAL064WP39711 94 aa6.78□□□□□ -1.32
MET28YIR017C YPL073CP40323 161 aa6.78□□□□□ -1.32
MET28YIR017C ATP5P09457 212 aa6.77□□□□□ -1.33
MET28YIR017C RPL18AP0CX49 186 aaKnown RBP6.77□□□□□ -1.33
MET28YIR017C RPL18BP0CX50 186 aaKnown RBP6.77□□□□□ -1.33
MET28YIR017C QCR8P08525 94 aa6.75□□□□□ -1.33
MET28YIR017C COX14P39103 70 aa6.75□□□□□ -1.33
MET28YIR017C CIN5P40917 295 aa6.75□□□□□ -1.33
MET28YIR017C YAL065CO13511 128 aa6.74□□□□□ -1.33
MET28YIR017C YDL022C-AP0C5L6 82 aa6.74□□□□□ -1.33
MET28YIR017C YBL081WP38180 368 aaKnown RBP6.74□□□□□ -1.33
MET28YIR017C YDL241WQ07738 123 aa6.74□□□□□ -1.33
MET28YIR017C IGO2Q9P305 131 aa6.74□□□□□ -1.33
MET28YIR017C ADH1P00330 348 aaKnown RBP6.73□□□□□ -1.33
MET28YIR017C HAP3P13434 144 aa6.73□□□□□ -1.33
MET28YIR017C RPF1P38805 295 aaKnown RBP6.73□□□□□ -1.33
MET28YIR017C VTC1P40046 129 aaRIP-Chip data6.73□□□□□ -1.33not detected
MET28YIR017C SCM4P32564 187 aa6.72□□□□□ -1.33
MET28YIR017C TOA2P32774 122 aa6.72□□□□□ -1.33
MET28YIR017C SNA2P56508 79 aa6.72□□□□□ -1.33
MET28YIR017C SAE3P89114 91 aa6.72□□□□□ -1.33
MET28YIR017C YDL085C-AQ3E7B7 68 aaKnown RBP6.72□□□□□ -1.33
MET28YIR017C MRP10O75012 95 aa6.71□□□□□ -1.34
MET28YIR017C RPL28P02406 149 aaKnown RBP6.7□□□□□ -1.34
MET28YIR017C YDR034C-AP0C289 58 aa6.7□□□□□ -1.34
MET28YIR017C GAT4P40569 121 aa6.7□□□□□ -1.34
MET28YIR017C MRPS12P53732 153 aa6.69□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 69.6 ms