RNA–Protein interactions for RNA: YIR009W

MSL1, Transcript of U2B component of U2 snRNP, yeastyeast

Gene MSL1, Length 336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSL1YIR009W MPC1P53157 130 aaKnown RBP1.03□□□□□ -2.24
MSL1YIR009W SED1Q01589 338 aa1.03□□□□□ -2.24
MSL1YIR009W YLR099W-AQ3E798 87 aa1.03□□□□□ -2.24
MSL1YIR009W YBR056W-AI2HB52 66 aa1.02□□□□□ -2.25
MSL1YIR009W PAU21P0CE86 164 aa1.02□□□□□ -2.25
MSL1YIR009W PAU22P0CE87 164 aa1.02□□□□□ -2.25
MSL1YIR009W MRPL15P36523 253 aa1.02□□□□□ -2.25
MSL1YIR009W YBR242WP38331 238 aa1.02□□□□□ -2.25
MSL1YIR009W YHL037CP38733 133 aa1.02□□□□□ -2.25
MSL1YIR009W VMA10P48836 114 aaKnown RBP1.02□□□□□ -2.25
MSL1YIR009W YGL230CP53074 147 aa1.02□□□□□ -2.25
MSL1YIR009W AIM36Q03798 255 aa1.02□□□□□ -2.25
MSL1YIR009W NAT5Q08689 176 aa1.02□□□□□ -2.25
MSL1YIR009W WIP1Q2V2P8 89 aa1.02□□□□□ -2.25
MSL1YIR009W NMT1P14743 455 aa1.01□□□□□ -2.25
MSL1YIR009W SRL3P36167 246 aa1.01□□□□□ -2.25
MSL1YIR009W RTC6O14464 93 aa1□□□□□ -2.25
MSL1YIR009W RPL33AP05744 107 aaKnown RBP1□□□□□ -2.25
MSL1YIR009W FUN14P18411 198 aa1□□□□□ -2.25
MSL1YIR009W ANB1P19211 157 aa1□□□□□ -2.25
MSL1YIR009W UGX2P32772 223 aa1□□□□□ -2.25
MSL1YIR009W APS2Q00381 147 aa1□□□□□ -2.25
MSL1YIR009W GTT2Q12390 233 aa1□□□□□ -2.25
MSL1YIR009W YGL014C-AP0C5N1 53 aa0.99□□□□□ -2.25
MSL1YIR009W YHR213WP0CI67 198 aa0.99□□□□□ -2.25
MSL1YIR009W YFR035CP43608 114 aa0.99□□□□□ -2.25
MSL1YIR009W SAE3P89114 91 aa0.99□□□□□ -2.25
MSL1YIR009W YPL067CQ02754 198 aa0.99□□□□□ -2.25
MSL1YIR009W YLR296WQ05898 108 aa0.99□□□□□ -2.25
MSL1YIR009W YPR203WQ08994 102 aa0.99□□□□□ -2.25
MSL1YIR009W YOR376W-AQ3E805 51 aa0.99□□□□□ -2.25
MSL1YIR009W KTI11Q3E840 82 aa0.99□□□□□ -2.25
MSL1YIR009W YAR064WP39563 99 aa0.98□□□□□ -2.25
MSL1YIR009W HUA1P40325 198 aa0.98□□□□□ -2.25
MSL1YIR009W LST8P41318 303 aa0.98□□□□□ -2.25
MSL1YIR009W YNL122CP53921 115 aaPredicted RBP0.98□□□□□ -2.25
MSL1YIR009W ARL3Q02804 198 aa0.98□□□□□ -2.25
MSL1YIR009W VAR1P02381 398 aa0.97□□□□□ -2.25
MSL1YIR009W YJL197C-AP0C5P0 93 aa0.97□□□□□ -2.25
MSL1YIR009W YKL044WP36092 106 aa0.97□□□□□ -2.25
MSL1YIR009W MRPL11P36521 249 aaPredicted RBP0.97□□□□□ -2.25
MSL1YIR009W RPB11P38902 120 aa0.97□□□□□ -2.25
MSL1YIR009W ERV14P53173 138 aa0.97□□□□□ -2.25
MSL1YIR009W YMR122CQ03879 124 aa0.97□□□□□ -2.25
MSL1YIR009W LDB18Q07887 179 aa0.97□□□□□ -2.25
MSL1YIR009W MYO1P08964 1928 aa0.97□□□□□ -2.25
MSL1YIR009W PFY1P07274 126 aa0.96□□□□□ -2.26
MSL1YIR009W YER039C-AP0CD97 72 aa0.96□□□□□ -2.26
MSL1YIR009W SEC59P20048 519 aa0.96□□□□□ -2.26
MSL1YIR009W YCR099CP25657 155 aa0.96□□□□□ -2.26
MSL1YIR009W ATG8P38182 117 aaRIP-Chip data0.96□□□□□ -2.26not detected
MSL1YIR009W AIM18P38884 321 aa0.96□□□□□ -2.26
MSL1YIR009W HSP10P38910 106 aa0.96□□□□□ -2.26
MSL1YIR009W YGL149WP53116 101 aa0.96□□□□□ -2.26
MSL1YIR009W YMR321CQ04898 105 aa0.96□□□□□ -2.26
MSL1YIR009W MHF1Q3E835 90 aa0.96□□□□□ -2.26
MSL1YIR009W MOT1P32333 1867 aa0.96□□□□□ -2.26
MSL1YIR009W YOR304C-AO14468 76 aa0.95□□□□□ -2.26
MSL1YIR009W HAP2P06774 265 aa0.95□□□□□ -2.26
MSL1YIR009W HAP3P13434 144 aa0.95□□□□□ -2.26
MSL1YIR009W GSP1P32835 219 aaKnown RBP0.95□□□□□ -2.26
MSL1YIR009W PRM3Q08931 133 aa0.95□□□□□ -2.26
MSL1YIR009W EMP24P32803 203 aaKnown RBP0.94□□□□□ -2.26
MSL1YIR009W GPI19Q04082 140 aa0.94□□□□□ -2.26
MSL1YIR009W SEN15Q04675 128 aa0.94□□□□□ -2.26
MSL1YIR009W COA4Q05809 96 aa0.94□□□□□ -2.26
MSL1YIR009W YLR042CQ07990 161 aa0.94□□□□□ -2.26
MSL1YIR009W YCR001WP25347 104 aa0.93□□□□□ -2.26
MSL1YIR009W SNF11P38956 169 aa0.93□□□□□ -2.26
MSL1YIR009W YAR029WP39549 74 aa0.93□□□□□ -2.26
MSL1YIR009W YJL009WP47078 108 aa0.93□□□□□ -2.26
MSL1YIR009W YGR164WP53291 111 aa0.93□□□□□ -2.26
MSL1YIR009W RUB1Q03919 77 aa0.93□□□□□ -2.26
MSL1YIR009W IRC21Q04772 201 aa0.93□□□□□ -2.26
MSL1YIR009W CCW14O13547 238 aa0.92□□□□□ -2.26
MSL1YIR009W RPL36BO14455 100 aaKnown RBP0.92□□□□□ -2.26
MSL1YIR009W RPL36AP05745 100 aaPredicted RBP0.92□□□□□ -2.26
MSL1YIR009W ADK1P07170 222 aaKnown RBP0.92□□□□□ -2.26
MSL1YIR009W UTP11P34247 250 aaPredicted RBP0.92□□□□□ -2.26
MSL1YIR009W AIM4P38305 123 aaPredicted RBP0.92□□□□□ -2.26
MSL1YIR009W YIL102CP40488 101 aa0.92□□□□□ -2.26
MSL1YIR009W PAM16P42949 149 aa0.92□□□□□ -2.26
MSL1YIR009W YMR007WQ03675 126 aa0.92□□□□□ -2.26
MSL1YIR009W CCW12Q12127 133 aa0.92□□□□□ -2.26
MSL1YIR009W YOL013W-AP0C272 63 aaPredicted RBP0.91□□□□□ -2.26
MSL1YIR009W YER187WP40102 141 aa0.91□□□□□ -2.26
MSL1YIR009W YIR020CP40575 100 aa0.91□□□□□ -2.26
MSL1YIR009W RPL37AP49166 88 aaKnown RBP0.91□□□□□ -2.26
MSL1YIR009W MGR2Q02889 113 aa0.91□□□□□ -2.26
MSL1YIR009W YLR194CQ05777 254 aa0.91□□□□□ -2.26
MSL1YIR009W YPL261CQ08976 102 aa0.91□□□□□ -2.26
MSL1YIR009W FCF2Q12035 217 aaPredicted RBP0.91□□□□□ -2.26
MSL1YIR009W OST5Q92316 86 aa0.91□□□□□ -2.26
MSL1YIR009W YSF3P0C074 85 aaPredicted RBP0.9□□□□□ -2.27
MSL1YIR009W PAU12P53343 120 aa0.9□□□□□ -2.27
MSL1YIR009W YIL014C-AQ02598 104 aa0.9□□□□□ -2.27
MSL1YIR009W YOR072WQ08486 104 aa0.9□□□□□ -2.27
MSL1YIR009W RTR2Q12378 196 aa0.9□□□□□ -2.27
MSL1YIR009W YLR365WQ7LIF2 110 aa0.9□□□□□ -2.27
MSL1YIR009W RPS22AP0C0W1 130 aaKnown RBP0.89□□□□□ -2.27
Retrieved 100 of 5,963 RNA–protein pairs in 93.6 ms