RNA–Protein interactions for RNA: YFL044C

OTU1, Transcript of Deubiquitylation enzyme that binds to the chaperone-ATPase Cdc48p, yeastyeast

Gene OTU1, Length 906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
OTU1YFL044C DAD1Q12248 94 aa2.5□□□□□ -2.01
OTU1YFL044C TIM22Q12328 207 aa2.5□□□□□ -2.01
OTU1YFL044C YMR122W-AQ3E842 84 aa2.5□□□□□ -2.01
OTU1YFL044C FUN14P18411 198 aa2.49□□□□□ -2.01
OTU1YFL044C GCV3P39726 170 aaPredicted RBP2.49□□□□□ -2.01
OTU1YFL044C ATP19P81451 68 aa2.49□□□□□ -2.01
OTU1YFL044C DGA1Q08650 418 aa2.49□□□□□ -2.01
OTU1YFL044C WIP1Q2V2P8 89 aa2.49□□□□□ -2.01
OTU1YFL044C VMA9Q3E7B6 73 aa2.49□□□□□ -2.01
OTU1YFL044C YHR139C-AO13536 103 aa2.48□□□□□ -2.01
OTU1YFL044C YJL197C-AP0C5P0 93 aa2.48□□□□□ -2.01
OTU1YFL044C UBC5P15732 148 aa2.48□□□□□ -2.01
OTU1YFL044C SRB6P32570 121 aa2.48□□□□□ -2.01
OTU1YFL044C SPC25P40014 221 aa2.48□□□□□ -2.01
OTU1YFL044C CYB5P40312 120 aa2.48□□□□□ -2.01
OTU1YFL044C HUA1P40325 198 aa2.48□□□□□ -2.01
OTU1YFL044C PGD1P40356 397 aa2.48□□□□□ -2.01
OTU1YFL044C POG1P40473 351 aa2.48□□□□□ -2.01
OTU1YFL044C YGR017WP53210 297 aa2.48□□□□□ -2.01
OTU1YFL044C YNL184CP53876 108 aa2.48□□□□□ -2.01
OTU1YFL044C LCL1Q02786 101 aa2.48□□□□□ -2.01
OTU1YFL044C RRT15Q3E811 62 aa2.48□□□□□ -2.01
OTU1YFL044C ADH3P07246 375 aaKnown RBP2.47□□□□□ -2.01
OTU1YFL044C RPS22AP0C0W1 130 aaKnown RBP2.47□□□□□ -2.01
OTU1YFL044C TIR1P10863 254 aa2.47□□□□□ -2.01
OTU1YFL044C SEC59P20048 519 aa2.47□□□□□ -2.01
OTU1YFL044C MAG1P22134 296 aaKnown RBP2.47□□□□□ -2.01
OTU1YFL044C MRP49P32388 137 aa2.47□□□□□ -2.01
OTU1YFL044C ATG8P38182 117 aaRIP-Chip data2.47□□□□□ -2.01not detected
OTU1YFL044C SVP26P38869 228 aa2.47□□□□□ -2.01
OTU1YFL044C SRP14P38985 146 aa2.47□□□□□ -2.01
OTU1YFL044C TEM1P38987 245 aa2.47□□□□□ -2.01
OTU1YFL044C PEX17P40155 199 aa2.47□□□□□ -2.01
OTU1YFL044C YFR045WP43617 309 aa2.47□□□□□ -2.01
OTU1YFL044C PAU4P53427 120 aa2.47□□□□□ -2.01
OTU1YFL044C PMP3P87284 55 aa2.47□□□□□ -2.01
OTU1YFL044C SMD1Q02260 146 aaPredicted RBP2.47□□□□□ -2.01
OTU1YFL044C YOR015WQ12169 119 aa2.47□□□□□ -2.01
OTU1YFL044C YIL134C-AQ45U18 67 aa2.47□□□□□ -2.01
OTU1YFL044C YAR023CD6VPM8 179 aa2.46□□□□□ -2.02
OTU1YFL044C PAU1P0CE88 120 aa2.46□□□□□ -2.02
OTU1YFL044C PAU14P0CE89 120 aa2.46□□□□□ -2.02
OTU1YFL044C PAU6P0CE90 120 aa2.46□□□□□ -2.02
OTU1YFL044C PAU18P0CE91 120 aa2.46□□□□□ -2.02
OTU1YFL044C PAU8P0CE92 120 aa2.46□□□□□ -2.02
OTU1YFL044C PAU11P0CE93 120 aa2.46□□□□□ -2.02
OTU1YFL044C RPL14AP36105 138 aaKnown RBP2.46□□□□□ -2.02
OTU1YFL044C PAU13P38725 120 aa2.46□□□□□ -2.02
OTU1YFL044C RPL14BP38754 138 aaKnown RBP2.46□□□□□ -2.02
OTU1YFL044C YIL059CP40520 121 aa2.46□□□□□ -2.02
OTU1YFL044C VMA21P41806 77 aa2.46□□□□□ -2.02
OTU1YFL044C SAE3P89114 91 aa2.46□□□□□ -2.02
OTU1YFL044C PAU10Q03050 120 aa2.46□□□□□ -2.02
OTU1YFL044C PKR1Q03880 122 aaKnown RBP2.46□□□□□ -2.02
OTU1YFL044C YMR320WQ04897 101 aa2.46□□□□□ -2.02
OTU1YFL044C FCF1Q05498 189 aaPredicted RBP2.46□□□□□ -2.02
OTU1YFL044C PAU20Q08322 120 aa2.46□□□□□ -2.02
OTU1YFL044C YOR105WQ08504 108 aa2.46□□□□□ -2.02
OTU1YFL044C YPL257WQ08974 193 aa2.46□□□□□ -2.02
OTU1YFL044C COX19Q3E731 98 aa2.46□□□□□ -2.02
OTU1YFL044C PAU9Q3E770 120 aa2.46□□□□□ -2.02
OTU1YFL044C YOR304C-AO14468 76 aa2.45□□□□□ -2.02
OTU1YFL044C ARC15P40518 154 aaRIP-Chip data2.45□□□□□ -2.02not detected
OTU1YFL044C GLC8P41818 229 aa2.45□□□□□ -2.02
OTU1YFL044C DAN1P47178 298 aa2.45□□□□□ -2.02
OTU1YFL044C YLR307C-AQ3E825 87 aa2.45□□□□□ -2.02
OTU1YFL044C YNR034W-AQ3E841 98 aa2.45□□□□□ -2.02
OTU1YFL044C SRP21P32342 167 aa2.44□□□□□ -2.02
OTU1YFL044C UGX2P32772 223 aa2.44□□□□□ -2.02
OTU1YFL044C FZF1P32805 299 aa2.44□□□□□ -2.02
OTU1YFL044C MSA2P36157 363 aa2.44□□□□□ -2.02
OTU1YFL044C YIL163CP40448 117 aa2.44□□□□□ -2.02
OTU1YFL044C MMS2P53152 137 aa2.44□□□□□ -2.02
OTU1YFL044C CYT2Q00873 224 aa2.44□□□□□ -2.02
OTU1YFL044C CUE4Q04201 117 aaPredicted RBP2.44□□□□□ -2.02
OTU1YFL044C SLO1Q3E784 85 aa2.44□□□□□ -2.02
OTU1YFL044C RPS28BP0C0X0 67 aaKnown RBP2.43□□□□□ -2.02
OTU1YFL044C RPF1P38805 295 aaKnown RBP2.43□□□□□ -2.02
OTU1YFL044C YHR140WP38842 239 aa2.43□□□□□ -2.02
OTU1YFL044C ABF2Q02486 183 aa2.43□□□□□ -2.02
OTU1YFL044C YLR194CQ05777 254 aa2.43□□□□□ -2.02
OTU1YFL044C NAT5Q08689 176 aa2.43□□□□□ -2.02
OTU1YFL044C YDR029WQ12111 104 aa2.43□□□□□ -2.02
OTU1YFL044C YLR361C-AQ3E795 98 aa2.43□□□□□ -2.02
OTU1YFL044C RPS28AQ3E7X9 67 aaPredicted RBP2.43□□□□□ -2.02
OTU1YFL044C ISD11Q6Q560 94 aa2.43□□□□□ -2.02
OTU1YFL044C ATP5P09457 212 aa2.42□□□□□ -2.02
OTU1YFL044C MRPL31P14063 131 aaPredicted RBP2.42□□□□□ -2.02
OTU1YFL044C MRPL11P36521 249 aaPredicted RBP2.42□□□□□ -2.02
OTU1YFL044C MRPS9P38120 278 aa2.42□□□□□ -2.02
OTU1YFL044C GPI19Q04082 140 aa2.42□□□□□ -2.02
OTU1YFL044C SMT3Q12306 101 aaKnown RBP2.42□□□□□ -2.02
OTU1YFL044C YPR170W-BP0C5R9 85 aa2.41□□□□□ -2.02
OTU1YFL044C HAP3P13434 144 aa2.41□□□□□ -2.02
OTU1YFL044C APS1P35181 156 aa2.41□□□□□ -2.02
OTU1YFL044C MID2P36027 376 aa2.41□□□□□ -2.02
OTU1YFL044C YBR090CP38253 122 aa2.41□□□□□ -2.02
OTU1YFL044C RPC10P40422 70 aa2.41□□□□□ -2.02
OTU1YFL044C YDL085C-AQ3E7B7 68 aaKnown RBP2.41□□□□□ -2.02
OTU1YFL044C HTL1Q9URQ5 78 aa2.41□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 208.1 ms