RNA–Protein interactions for RNA: YER151C

UBP3, Transcript of Ubiquitin-specific protease involved in transport and osmotic response, yeast

Gene UBP3, Length 2,739 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBP3	YER151C	YGR050C	P53231	118 aa		0.45	□□□□□ -2.34
UBP3	YER151C	HCH1	P53834	153 aa		0.45	□□□□□ -2.34
UBP3	YER151C	TIM22	Q12328	207 aa		0.45	□□□□□ -2.34
UBP3	YER151C	RPL27A	P0C2H6	136 aa	Known RBP	0.45	□□□□□ -2.34
UBP3	YER151C	SNF4	P12904	322 aa		0.45	□□□□□ -2.34
UBP3	YER151C	YKR070W	P36151	352 aa	Known RBP	0.45	□□□□□ -2.34
UBP3	YER151C	YBL081W	P38180	368 aa	Known RBP	0.45	□□□□□ -2.34
UBP3	YER151C	UMP1	P38293	148 aa		0.45	□□□□□ -2.34
UBP3	YER151C	PAU7	P39545	55 aa		0.45	□□□□□ -2.34
UBP3	YER151C	AIM2	P39721	246 aa		0.45	□□□□□ -2.34
UBP3	YER151C	PAU5	P43575	122 aa		0.45	□□□□□ -2.34
UBP3	YER151C	MIC27	P50945	234 aa		0.45	□□□□□ -2.34
UBP3	YER151C	ARC18	Q05933	178 aa	Known RBP	0.45	□□□□□ -2.34
UBP3	YER151C	YPR153W	Q06537	140 aa		0.45	□□□□□ -2.34
UBP3	YER151C	COX5B	P00425	151 aa		0.44	□□□□□ -2.34
UBP3	YER151C	YJR128W	P47162	119 aa		0.44	□□□□□ -2.34
UBP3	YER151C	MET31	Q03081	177 aa		0.44	□□□□□ -2.34
UBP3	YER151C	YPL257W	Q08974	193 aa		0.44	□□□□□ -2.34
UBP3	YER151C	YLR053C	Q12026	108 aa		0.44	□□□□□ -2.34
UBP3	YER151C	TAO3	P40468	2376 aa		0.44	□□□□□ -2.34
UBP3	YER151C	CCA1	P21269	546 aa		0.44	□□□□□ -2.34
UBP3	YER151C	PET18	P25362	215 aa		0.44	□□□□□ -2.34
UBP3	YER151C	EOS1	P53938	366 aa		0.44	□□□□□ -2.34
UBP3	YER151C	DDR2	P89113	61 aa		0.44	□□□□□ -2.34
UBP3	YER151C	GPI11	Q06636	219 aa		0.44	□□□□□ -2.34
UBP3	YER151C	TDA8	Q6B2U8	126 aa		0.44	□□□□□ -2.34
UBP3	YER151C	URA2	P07259	2214 aa	Known RBP	0.44	□□□□□ -2.34
UBP3	YER151C	YAL065C	O13511	128 aa		0.44	□□□□□ -2.34
UBP3	YER151C	MRPL31	P14063	131 aa	Predicted RBP	0.44	□□□□□ -2.34
UBP3	YER151C	YER137C	P40083	148 aa	Known RBP	0.44	□□□□□ -2.34
UBP3	YER151C	YGL088W	P53151	121 aa		0.44	□□□□□ -2.34
UBP3	YER151C	ICY1	Q04329	127 aa		0.44	□□□□□ -2.34
UBP3	YER151C	YMR252C	Q04814	134 aa		0.44	□□□□□ -2.34
UBP3	YER151C	TFB5	Q3E7C1	72 aa	Predicted RBP	0.44	□□□□□ -2.34
UBP3	YER151C	YAR023C	D6VPM8	179 aa		0.43	□□□□□ -2.34
UBP3	YER151C	TAL1	P15019	335 aa	Known RBP	0.43	□□□□□ -2.34
UBP3	YER151C	YNL217W	P40152	326 aa		0.43	□□□□□ -2.34
UBP3	YER151C	DCV1	P43595	202 aa		0.43	□□□□□ -2.34
UBP3	YER151C	CAX4	P53223	239 aa		0.43	□□□□□ -2.34
UBP3	YER151C	CTR3	Q06686	241 aa		0.43	□□□□□ -2.34
UBP3	YER151C	YOR268C	Q08734	132 aa		0.43	□□□□□ -2.34
UBP3	YER151C	HTL1	Q9URQ5	78 aa		0.43	□□□□□ -2.34
UBP3	YER151C	COX23	P38824	151 aa		0.43	□□□□□ -2.34
UBP3	YER151C	YIL163C	P40448	117 aa		0.43	□□□□□ -2.34
UBP3	YER151C	AIM25	P47140	327 aa		0.43	□□□□□ -2.34
UBP3	YER151C	YGL118C	P53132	145 aa		0.43	□□□□□ -2.34
UBP3	YER151C	TOM7	P53507	60 aa		0.43	□□□□□ -2.34
UBP3	YER151C	PDR17	P53844	350 aa		0.43	□□□□□ -2.34
UBP3	YER151C	CSN9	Q03981	162 aa		0.43	□□□□□ -2.34
UBP3	YER151C	YOR105W	Q08504	108 aa		0.43	□□□□□ -2.34
UBP3	YER151C	YLR050C	Q12155	161 aa	Known RBP	0.43	□□□□□ -2.34
UBP3	YER151C	CTR2	P38865	189 aa		0.42	□□□□□ -2.34
UBP3	YER151C	BXI1	P48558	297 aa		0.42	□□□□□ -2.34
UBP3	YER151C	YPT32	P51996	222 aa	Known RBP	0.42	□□□□□ -2.34
UBP3	YER151C	TIM13	P53299	105 aa		0.42	□□□□□ -2.34
UBP3	YER151C	ABF2	Q02486	183 aa		0.42	□□□□□ -2.34
UBP3	YER151C	AQY2	P0CD90	149 aa		0.42	□□□□□ -2.34
UBP3	YER151C	PAU19	P0CE85	124 aa		0.42	□□□□□ -2.34
UBP3	YER151C	PAU21	P0CE86	164 aa		0.42	□□□□□ -2.34
UBP3	YER151C	PAU22	P0CE87	164 aa		0.42	□□□□□ -2.34
UBP3	YER151C	PAU3	P25610	124 aa		0.42	□□□□□ -2.34
UBP3	YER151C	DAD2	P36162	133 aa		0.42	□□□□□ -2.34
UBP3	YER151C	POP7	P38291	140 aa		0.42	□□□□□ -2.34
UBP3	YER151C	YHR140W	P38842	239 aa		0.42	□□□□□ -2.34
UBP3	YER151C	VMA7	P39111	118 aa		0.42	□□□□□ -2.34
UBP3	YER151C	YEL067C	P39978	195 aa		0.42	□□□□□ -2.34
UBP3	YER151C	PAU15	P40585	124 aa		0.42	□□□□□ -2.34
UBP3	YER151C	YPL080C	Q02826	108 aa		0.42	□□□□□ -2.34
UBP3	YER151C	KTI11	Q3E840	82 aa		0.42	□□□□□ -2.34
UBP3	YER151C	RPL18A	P0CX49	186 aa	Known RBP	0.41	□□□□□ -2.34
UBP3	YER151C	RPL18B	P0CX50	186 aa	Known RBP	0.41	□□□□□ -2.34
UBP3	YER151C	UGX2	P32772	223 aa		0.41	□□□□□ -2.34
UBP3	YER151C	PAU16	P35994	123 aa		0.41	□□□□□ -2.34
UBP3	YER151C	YER135C	P40082	130 aa		0.41	□□□□□ -2.34
UBP3	YER151C	FMP32	P43557	207 aa		0.41	□□□□□ -2.34
UBP3	YER151C	OST2	P46964	130 aa		0.41	□□□□□ -2.34
UBP3	YER151C	BUD25	P85052	153 aa		0.41	□□□□□ -2.34
UBP3	YER151C	RRT7	Q07829	113 aa		0.41	□□□□□ -2.34
UBP3	YER151C	YOL014W	Q08110	124 aa		0.41	□□□□□ -2.34
UBP3	YER151C	PAA1	Q12447	191 aa	Known RBP	0.41	□□□□□ -2.34
UBP3	YER151C	POL2	P21951	2222 aa	Known RBP	0.41	□□□□□ -2.34
UBP3	YER151C	UBI4	P0CG63	381 aa	Known RBP	0.41	□□□□□ -2.34
UBP3	YER151C	YAR1	P46683	200 aa		0.41	□□□□□ -2.34
UBP3	YER151C	GIM5	Q04493	163 aa		0.41	□□□□□ -2.34
UBP3	YER151C	KEI1	Q06346	221 aa		0.41	□□□□□ -2.34
UBP3	YER151C	YGR269W	P40326	108 aa		0.4	□□□□□ -2.35
UBP3	YER151C	PHS1	P40857	217 aa		0.4	□□□□□ -2.35
UBP3	YER151C	PNC1	P53184	216 aa	Known RBP	0.4	□□□□□ -2.35
UBP3	YER151C	YNR077C	P53758	84 aa		0.4	□□□□□ -2.35
UBP3	YER151C	BSC4	P53841	131 aa		0.4	□□□□□ -2.35
UBP3	YER151C	MGR3	Q04472	501 aa		0.4	□□□□□ -2.35
UBP3	YER151C	RAD6	P06104	172 aa		0.4	□□□□□ -2.35
UBP3	YER151C	YKL044W	P36092	106 aa		0.4	□□□□□ -2.35
UBP3	YER151C	SSO2	P39926	295 aa		0.4	□□□□□ -2.35
UBP3	YER151C	FMC1	P40491	155 aa		0.4	□□□□□ -2.35
UBP3	YER151C	GLC8	P41818	229 aa		0.4	□□□□□ -2.35
UBP3	YER151C	CWP2	P43497	92 aa		0.4	□□□□□ -2.35
UBP3	YER151C	DGA1	Q08650	418 aa		0.4	□□□□□ -2.35
UBP3	YER151C	YPR014C	Q6B0W2	109 aa		0.4	□□□□□ -2.35
UBP3	YER151C	NHP6A	P11632	93 aa	Known RBP	0.39	□□□□□ -2.35

Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms